FFCP PHASE1:Hg19::chr11:17741254..17741282,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4654 | |EntrezGene=4654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7611 | |HGNC=7611 | ||
|TSSclassifier=strong | |||
|UniProt=P15172 | |UniProt=P15172 | ||
|association_with_transcript=139bp_to_ENST00000250003_5end | |association_with_transcript=139bp_to_ENST00000250003_5end | ||
|cluster_id=chr11:17741254..17741282,+ | |||
|coexpression_cluster_id=C559 | |||
|description=CAGE_peak_2_at_MYOD1_5end | |description=CAGE_peak_2_at_MYOD1_5end | ||
|id=chr11:17741254..17741282,+ | |id=chr11:17741254..17741282,+ | ||
|ontology_enrichment_celltype=CL:0000188!1.42e-36!9;CL:0000515!6.61e-18!4;CL:0000680!4.58e-13!57;CL:0000056!4.58e-13!57;CL:0000355!4.58e-13!57;CL:0000594!7.39e-13!3;CL:0002603!8.69e-13!3;CL:0002586!9.43e-13!3;CL:0000183!1.27e-10!59;CL:0000149!1.11e-09!4;CL:0002575!2.15e-09!2;CL:0000187!1.62e-08!54;CL:0000393!2.01e-07!60;CL:0000211!2.01e-07!60 | |ontology_enrichment_celltype=CL:0000188!1.42e-36!9;CL:0000515!6.61e-18!4;CL:0000680!4.58e-13!57;CL:0000056!4.58e-13!57;CL:0000355!4.58e-13!57;CL:0000594!7.39e-13!3;CL:0002603!8.69e-13!3;CL:0002586!9.43e-13!3;CL:0000183!1.27e-10!59;CL:0000149!1.11e-09!4;CL:0002575!2.15e-09!2;CL:0000187!1.62e-08!54;CL:0000393!2.01e-07!60;CL:0000211!2.01e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000056;1.75e-40;4!CL:0000188;1.18e-39;9!CL:0000680;1.08e-35;7!CL:0000515;7.76e-31;3!CL:0000228;1.87e-11;1!CL:0002372;1.87e-11;1!CL:0002321;5.21e-11;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,1.58e-40,4;CL:0000188,1.31e-39,9;CL:0000680,7.65e-13,58;CL:0000056,7.65e-13,58;CL:0000355,7.65e-13,58;CL:0000228,1.97e-11,1;CL:0002372,1.97e-11,1 | |||
|ontology_enrichment_development_v019=CL:0000515;1.75e-40;4!CL:0000355;2.23e-09;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p2@MYOD1 | |short_description=p2@MYOD1 | ||
}} | }} |
Latest revision as of 00:42, 17 September 2015
Short description: | p2@MYOD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MYOD1_5end |
Coexpression cluster: | C559_Skeletal_Pericytes_mesenchymal_Myoblast_rhabdomyosarcoma_skeletal_tongue |
Association with transcript: | 139bp_to_ENST00000250003_5end |
EntrezGene: | MYOD1 |
HGNC: | 7611 |
UniProt: | P15172 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 1.58e-40 | 4 |
cell of skeletal muscle | 1.31e-39 | 9 |
muscle precursor cell | 7.65e-13 | 58 |
myoblast | 7.65e-13 | 58 |
multi-potent skeletal muscle stem cell | 7.65e-13 | 58 |
multinucleate cell | 1.97e-11 | 1 |
myotube | 1.97e-11 | 1 |