FFCP PHASE1:Hg19::chr1:150230212..150230227,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:150230212..150230227,+
|short_description=p5@CA14
|description=CAGE_peak_5_at_CA14_5end
|association_with_transcript=0bp_to_NM_012113,uc001etx.2,uc009wln.2...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23632 | |EntrezGene=23632 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1372 | |HGNC=1372 | ||
|TSSclassifier=strong | |||
|UniProt=A8K3J4,Q9ULX7 | |UniProt=A8K3J4,Q9ULX7 | ||
|association_with_transcript=0bp_to_NM_012113,uc001etx.2,uc009wln.2_5end | |||
|cluster_id=chr1:150230212..150230227,+ | |||
|coexpression_cluster_id=C1249 | |||
|description=CAGE_peak_5_at_CA14_5end | |||
|id=chr1:150230212..150230227,+ | |||
|ontology_enrichment_celltype=CL:0000147!7.99e-16!14;CL:0000148!1.60e-13!10;CL:0000541!1.60e-13!10;CL:0002322!2.71e-09!5;CL:0000133!2.47e-07!59;CL:0000047!3.60e-07!8;CL:0000149!4.65e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000147;2.00e-28;14!CL:0000148;7.49e-28;10!CL:0002322;3.79e-18;5!CL:0000710;5.13e-13;20!CL:0000075;2.29e-11;27!CL:0000149;2.77e-08;4!CL:0002321;3.55e-08;15!CL:0000047;2.07e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000147,1.77e-28,14;CL:0000148,8.33e-28,10;CL:0000541,8.33e-28,10;CL:0002322,3.82e-18,5;CL:0000710,5.39e-13,20;CL:0000075,2.47e-11,27;CL:0000047,9.92e-11,8;CL:0000133,1.48e-09,59;CL:0000149,2.27e-08,4;CL:0000221,2.77e-07,72;CL:0002077,6.24e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.21e-40!86;UBERON:0000073!3.95e-40!94;UBERON:0001016!3.95e-40!94;UBERON:0007023!7.43e-39!115;UBERON:0001049!5.33e-38!57;UBERON:0005068!5.33e-38!57;UBERON:0006241!5.33e-38!57;UBERON:0007135!5.33e-38!57;UBERON:0001017!6.65e-36!82;UBERON:0003075!1.47e-33!86;UBERON:0007284!1.47e-33!86;UBERON:0002346!1.10e-32!90;UBERON:0002616!1.49e-30!59;UBERON:0002780!1.69e-27!41;UBERON:0001890!1.69e-27!41;UBERON:0006240!1.69e-27!41;UBERON:0000955!8.94e-27!69;UBERON:0006238!8.94e-27!69;UBERON:0003080!1.30e-26!42;UBERON:0001893!1.69e-25!34;UBERON:0002020!2.30e-25!34;UBERON:0003528!2.30e-25!34;UBERON:0002791!2.47e-24!33;UBERON:0003056!4.21e-24!61;UBERON:0001869!7.96e-23!32;UBERON:0004121!3.52e-22!169;UBERON:0000924!4.69e-22!173;UBERON:0006601!4.69e-22!173;UBERON:0000033!2.78e-17!123;UBERON:0000153!9.88e-17!129;UBERON:0007811!9.88e-17!129;UBERON:0000956!9.62e-16!25;UBERON:0000203!9.62e-16!25;UBERON:0002619!2.95e-13!22;UBERON:0001950!3.47e-13!20;UBERON:0003076!2.15e-12!15;UBERON:0003057!2.15e-12!15;UBERON:0002308!9.51e-12!9;UBERON:0000125!9.51e-12!9;UBERON:0004732!2.60e-10!13;UBERON:0002298!1.11e-09!8;UBERON:0009663!2.97e-09!7;UBERON:0004733!4.47e-09!12;UBERON:0002028!4.47e-09!12;UBERON:0007277!4.47e-09!12;UBERON:0002420!8.84e-09!9;UBERON:0007245!8.84e-09!9;UBERON:0010009!8.84e-09!9;UBERON:0010011!8.84e-09!9;UBERON:0000454!8.84e-09!9;UBERON:0000025!9.90e-09!194;UBERON:0000064!1.62e-07!219;UBERON:0004111!1.68e-07!241;UBERON:0001872!3.58e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;3.39e-19;6!UBERON:0004732;7.97e-15;13!UBERON:0004733;1.84e-12;12!UBERON:0002028;1.84e-12;12!UBERON:0001896;1.25e-10;3!UBERON:0005290;1.25e-10;3!UBERON:0000988;2.73e-10;3!UBERON:0001897;6.99e-08;2!UBERON:0010225;6.99e-08;2!UBERON:0005162;9.36e-08;2!UBERON:0000122;9.36e-08;2!UBERON:0002148;2.07e-07;2!UBERON:0006331;2.07e-07;2!UBERON:0009662;2.07e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,2.50e-19,6;UBERON:0004732,5.16e-15,13;UBERON:0001016,8.59e-15,89;UBERON:0007023,2.29e-14,114;UBERON:0001017,8.06e-14,81;UBERON:0003076,7.15e-13,15;UBERON:0003057,7.15e-13,15;UBERON:0004733,1.33e-12,12;UBERON:0002028,1.33e-12,12;UBERON:0007277,1.33e-12,12;UBERON:0003075,2.29e-12,82;UBERON:0007284,2.29e-12,82;UBERON:0002346,1.44e-11,86;UBERON:0001049,5.59e-11,56;UBERON:0005068,5.59e-11,56;UBERON:0006241,5.59e-11,56;UBERON:0007135,5.59e-11,56;UBERON:0001896,5.97e-11,3;UBERON:0005290,5.97e-11,3;UBERON:0010096,5.97e-11,3;UBERON:0000073,3.29e-10,53;UBERON:0002616,3.29e-10,53;UBERON:0000988,4.13e-10,3;UBERON:0010371,8.99e-10,104;UBERON:0000966,2.70e-09,6;UBERON:0005388,2.70e-09,6;UBERON:0001802,2.70e-09,6;UBERON:0004121,6.05e-09,171;UBERON:0000924,6.05e-09,171;UBERON:0006601,6.05e-09,171;UBERON:0000955,3.05e-08,68;UBERON:0006238,3.05e-08,68;UBERON:0001897,5.70e-08,2;UBERON:0010225,5.70e-08,2;UBERON:0001781,5.86e-08,4;UBERON:0005162,8.33e-08,2;UBERON:0000122,8.33e-08,2;UBERON:0010314,1.39e-07,132;UBERON:0002148,4.56e-07,2;UBERON:0006331,4.56e-07,2;UBERON:0009662,4.56e-07,2 | |||
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| ||
|short_description=p5@CA14 | |||
}} | }} |
Latest revision as of 21:46, 16 September 2015
Short description: | p5@CA14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CA14_5end |
Coexpression cluster: | C1249_Melanocyte_anaplastic_Wilms_retina_heart_optic_teratocarcinoma |
Association with transcript: | 0bp_to_NM_012113, uc001etx.2, uc009wln.2_5end |
EntrezGene: | CA14 |
HGNC: | 1372 |
UniProt: | A8K3J4Q9ULX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 1.77e-28 | 14 |
melanocyte | 8.33e-28 | 10 |
melanoblast | 8.33e-28 | 10 |
embryonic stem cell | 3.82e-18 | 5 |
neurecto-epithelial cell | 5.39e-13 | 20 |
columnar/cuboidal epithelial cell | 2.47e-11 | 27 |
neuronal stem cell | 9.92e-11 | 8 |
neurectodermal cell | 1.48e-09 | 59 |
visual pigment cell | 2.27e-08 | 4 |
ectodermal cell | 2.77e-07 | 72 |
ecto-epithelial cell | 6.24e-07 | 34 |