FFCP PHASE1:Hg19::chr6:167704798..167704811,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54346 | |EntrezGene=54346 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12570 | |HGNC=12570 | ||
|TSSclassifier=strong | |||
|UniProt=Q86WB7,Q4QQJ4 | |UniProt=Q86WB7,Q4QQJ4 | ||
|association_with_transcript=0bp_to_ENST00000230256,NM_001143947,NM_018974,uc003qvq.2,uc003qvr.2_5end | |association_with_transcript=0bp_to_ENST00000230256,NM_001143947,NM_018974,uc003qvq.2,uc003qvr.2_5end | ||
|cluster_id=chr6:167704798..167704811,+ | |||
|coexpression_cluster_id=C304 | |coexpression_cluster_id=C304 | ||
|description=CAGE_peak_5_at_UNC93A_5end | |description=CAGE_peak_5_at_UNC93A_5end | ||
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|ontology_enrichment_celltype=CL:0000181!4.12e-35!12;CL:0000417!4.12e-35!12;CL:0000668!4.12e-35!12;CL:0000414!4.12e-35!12;CL:0000412!4.12e-35!12;CL:0000182!4.12e-35!12;CL:0000223!3.48e-09!59 | |ontology_enrichment_celltype=CL:0000181!4.12e-35!12;CL:0000417!4.12e-35!12;CL:0000668!4.12e-35!12;CL:0000414!4.12e-35!12;CL:0000412!4.12e-35!12;CL:0000182!4.12e-35!12;CL:0000223!3.48e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;6.82e-30;12 | |ontology_enrichment_celltype_v019=CL:0000182;6.82e-30;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.82e-30,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.35e-50;11!UBERON:0009497;2.22e-42;13!UBERON:0001041;1.43e-18;30!UBERON:0003104;6.23e-18;31 | |ontology_enrichment_development_v019=UBERON:0004161;5.35e-50;11!UBERON:0009497;2.22e-42;13!UBERON:0001041;1.43e-18;30!UBERON:0003104;6.23e-18;31 | ||
|ontology_enrichment_disease=DOID:7!1.74e-07!39 | |ontology_enrichment_disease=DOID:7!1.74e-07!39 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.73e-39!19;UBERON:0006925!5.73e-39!19;UBERON:0008836!5.73e-39!19;UBERON:0008835!1.46e-33!22;UBERON:0003894!1.46e-33!22;UBERON:0009854!4.50e-32!23;UBERON:0007499!1.89e-29!25;UBERON:0009497!1.89e-29!25;UBERON:0000015!1.89e-29!25;UBERON:0002423!1.89e-29!25;UBERON:0006235!1.89e-29!25;UBERON:0004161!1.89e-29!25;UBERON:0005057!2.73e-28!26;UBERON:0009856!2.73e-28!26;UBERON:0002365!1.31e-23!31;UBERON:0002330!1.31e-23!31;UBERON:0002368!8.00e-21!35;UBERON:0005172!3.96e-20!55;UBERON:0005173!3.96e-20!55;UBERON:0002417!4.97e-18!61;UBERON:0000916!4.97e-18!61;UBERON:0003929!1.21e-16!54;UBERON:0000949!5.10e-16!45;UBERON:0002530!5.10e-12!59;UBERON:0004921!1.93e-11!129;UBERON:0004185!1.93e-11!129;UBERON:0005911!1.35e-10!82;UBERON:0005177!9.85e-10!107;UBERON:0001007!2.95e-09!155;UBERON:0001555!2.95e-09!155;UBERON:0007026!2.95e-09!155;UBERON:0009569!3.80e-09!113;UBERON:0004119!2.35e-08!169;UBERON:0000925!2.35e-08!169;UBERON:0006595!2.35e-08!169;UBERON:0002108!1.37e-07!14;UBERON:0001041!7.00e-07!98;UBERON:0000160!7.01e-07!27 | |ontology_enrichment_uberon=UBERON:0002107!5.73e-39!19;UBERON:0006925!5.73e-39!19;UBERON:0008836!5.73e-39!19;UBERON:0008835!1.46e-33!22;UBERON:0003894!1.46e-33!22;UBERON:0009854!4.50e-32!23;UBERON:0007499!1.89e-29!25;UBERON:0009497!1.89e-29!25;UBERON:0000015!1.89e-29!25;UBERON:0002423!1.89e-29!25;UBERON:0006235!1.89e-29!25;UBERON:0004161!1.89e-29!25;UBERON:0005057!2.73e-28!26;UBERON:0009856!2.73e-28!26;UBERON:0002365!1.31e-23!31;UBERON:0002330!1.31e-23!31;UBERON:0002368!8.00e-21!35;UBERON:0005172!3.96e-20!55;UBERON:0005173!3.96e-20!55;UBERON:0002417!4.97e-18!61;UBERON:0000916!4.97e-18!61;UBERON:0003929!1.21e-16!54;UBERON:0000949!5.10e-16!45;UBERON:0002530!5.10e-12!59;UBERON:0004921!1.93e-11!129;UBERON:0004185!1.93e-11!129;UBERON:0005911!1.35e-10!82;UBERON:0005177!9.85e-10!107;UBERON:0001007!2.95e-09!155;UBERON:0001555!2.95e-09!155;UBERON:0007026!2.95e-09!155;UBERON:0009569!3.80e-09!113;UBERON:0004119!2.35e-08!169;UBERON:0000925!2.35e-08!169;UBERON:0006595!2.35e-08!169;UBERON:0002108!1.37e-07!14;UBERON:0001041!7.00e-07!98;UBERON:0000160!7.01e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.06e-41;19!UBERON:0006925;1.06e-41;19!UBERON:0002423;9.38e-32;25!UBERON:0002365;3.95e-24;31!UBERON:0002330;3.95e-24;31!UBERON:0002368;3.71e-21;33!UBERON:0000949;2.28e-15;43!UBERON:0005172;1.48e-09;52!UBERON:0005173;1.48e-09;52!UBERON:0002530;4.42e-09;57!UBERON:0002417;1.81e-08;58!UBERON:0000916;1.81e-08;58 | |ontology_enrichment_uberon_v019=UBERON:0002107;1.06e-41;19!UBERON:0006925;1.06e-41;19!UBERON:0002423;9.38e-32;25!UBERON:0002365;3.95e-24;31!UBERON:0002330;3.95e-24;31!UBERON:0002368;3.71e-21;33!UBERON:0000949;2.28e-15;43!UBERON:0005172;1.48e-09;52!UBERON:0005173;1.48e-09;52!UBERON:0002530;4.42e-09;57!UBERON:0002417;1.81e-08;58!UBERON:0000916;1.81e-08;58 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.10e-41,19;UBERON:0006925,1.10e-41,19;UBERON:0008836,1.10e-41,19;UBERON:0008835,4.88e-36,22;UBERON:0003894,4.88e-36,22;UBERON:0009854,1.75e-34,23;UBERON:0007499,9.64e-32,25;UBERON:0009497,9.64e-32,25;UBERON:0000015,9.64e-32,25;UBERON:0002423,9.64e-32,25;UBERON:0006235,9.64e-32,25;UBERON:0004161,9.64e-32,25;UBERON:0009856,1.57e-30,26;UBERON:0002365,1.23e-25,31;UBERON:0002330,1.23e-25,31;UBERON:0002368,9.99e-23,35;UBERON:0000949,1.05e-17,45;UBERON:0003929,9.15e-15,54;UBERON:0005172,9.15e-15,54;UBERON:0005173,9.15e-15,54;UBERON:0002530,1.62e-13,59;UBERON:0002417,2.72e-13,60;UBERON:0000916,2.72e-13,60;UBERON:0005911,1.01e-09,82;UBERON:0001041,3.67e-09,87;UBERON:0004921,5.69e-09,118;UBERON:0005177,7.01e-08,101;UBERON:0001007,2.87e-07,145;UBERON:0001555,2.87e-07,145;UBERON:0007026,2.87e-07,145;UBERON:0009569,4.27e-07,112;UBERON:0003914,8.69e-07,117 | |||
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|short_description=p5@UNC93A | |short_description=p5@UNC93A | ||
}} | }} |
Latest revision as of 21:34, 16 September 2015
Short description: | p5@UNC93A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_UNC93A_5end |
Coexpression cluster: | [[Coexpression cluster:C304|]] |
Association with transcript: | 0bp_to_ENST00000230256, NM_001143947, NM_018974, uc003qvq.2, uc003qvr.2_5end |
EntrezGene: | UNC93A |
HGNC: | 12570 |
UniProt: | Q86WB7Q4QQJ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.82e-30 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.10e-41 | 19 |
digestive gland | 1.10e-41 | 19 |
liver bud | 1.10e-41 | 19 |
hepatic diverticulum | 4.88e-36 | 22 |
liver primordium | 4.88e-36 | 22 |
digestive tract diverticulum | 1.75e-34 | 23 |
epithelial sac | 9.64e-32 | 25 |
epithelium of foregut-midgut junction | 9.64e-32 | 25 |
anatomical boundary | 9.64e-32 | 25 |
hepatobiliary system | 9.64e-32 | 25 |
foregut-midgut junction | 9.64e-32 | 25 |
septum transversum | 9.64e-32 | 25 |
sac | 1.57e-30 | 26 |
exocrine gland | 1.23e-25 | 31 |
exocrine system | 1.23e-25 | 31 |
endocrine gland | 9.99e-23 | 35 |
endocrine system | 1.05e-17 | 45 |
gut epithelium | 9.15e-15 | 54 |
abdomen element | 9.15e-15 | 54 |
abdominal segment element | 9.15e-15 | 54 |
gland | 1.62e-13 | 59 |
abdominal segment of trunk | 2.72e-13 | 60 |
abdomen | 2.72e-13 | 60 |
endo-epithelium | 1.01e-09 | 82 |
foregut | 3.67e-09 | 87 |
subdivision of digestive tract | 5.69e-09 | 118 |
trunk region element | 7.01e-08 | 101 |
digestive system | 2.87e-07 | 145 |
digestive tract | 2.87e-07 | 145 |
primitive gut | 2.87e-07 | 145 |
subdivision of trunk | 4.27e-07 | 112 |
epithelial tube | 8.69e-07 | 117 |