FFCP PHASE1:Hg19::chr12:121417546..121417562,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=26785 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000433033_5end | |||
|cluster_id=chr12:121417546..121417562,- | |||
|coexpression_cluster_id=C690 | |||
|description=CAGE_peak_5_at_HNF1A-AS1_5end | |||
|id=chr12:121417546..121417562,- | |||
|ontology_enrichment_celltype=CL:0000181!9.52e-18!12;CL:0000417!9.52e-18!12;CL:0000668!9.52e-18!12;CL:0000414!9.52e-18!12;CL:0000412!9.52e-18!12;CL:0000182!9.52e-18!12;CL:0000223!2.84e-10!59;CL:0000313!7.50e-08!1;CL:0002563!5.89e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000313;8.01e-18;1!CL:0000159;1.38e-09;2!CL:0002535;1.38e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,3.75e-18,1;CL:0000159,9.46e-10,2;CL:0002535,1.22e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!3.74e-08!25;DOID:2152!7.50e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:2152;8.01e-18;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,3.75e-18,1 | |||
|ontology_enrichment_uberon=UBERON:0005409!3.08e-22!35;UBERON:0000160!2.84e-20!27;UBERON:0002107!9.19e-15!19;UBERON:0006925!9.19e-15!19;UBERON:0008836!9.19e-15!19;UBERON:0004921!1.46e-14!129;UBERON:0004185!1.46e-14!129;UBERON:0009497!2.52e-14!25;UBERON:0000015!2.52e-14!25;UBERON:0002423!2.52e-14!25;UBERON:0006235!2.52e-14!25;UBERON:0004161!2.52e-14!25;UBERON:0001007!7.44e-13!155;UBERON:0001555!7.44e-13!155;UBERON:0007026!7.44e-13!155;UBERON:0008835!1.23e-12!22;UBERON:0003894!1.23e-12!22;UBERON:0009854!4.75e-12!23;UBERON:0003929!1.88e-11!54;UBERON:0004119!1.93e-11!169;UBERON:0000925!1.93e-11!169;UBERON:0006595!1.93e-11!169;UBERON:0007499!5.12e-11!25;UBERON:0005057!1.46e-10!26;UBERON:0009856!1.46e-10!26;UBERON:0002108!3.36e-10!14;UBERON:0000949!2.00e-09!45;UBERON:0005172!2.86e-09!55;UBERON:0005173!2.86e-09!55;UBERON:0000059!4.27e-09!11;UBERON:0002365!1.01e-08!31;UBERON:0002330!1.01e-08!31;UBERON:0002417!3.43e-08!61;UBERON:0000916!3.43e-08!61;UBERON:0004911!7.50e-08!1;UBERON:0002368!1.26e-07!35;UBERON:0000077!2.26e-07!130;UBERON:0001242!5.89e-07!4;UBERON:0001262!5.89e-07!4;UBERON:0004786!5.89e-07!4;UBERON:0004808!5.89e-07!4;UBERON:0001277!5.89e-07!4;UBERON:0001052!6.65e-07!4;UBERON:0005911!7.10e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;8.01e-18;1!UBERON:0000160;4.40e-15;17!UBERON:0002108;2.41e-14;4!UBERON:0005409;7.04e-12;22!UBERON:0006955;1.38e-09;2!UBERON:0004909;1.38e-09;2!UBERON:0004801;1.38e-09;2!UBERON:0004921;3.37e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,3.75e-18,1;UBERON:0000160,4.57e-15,17;UBERON:0002108,1.84e-14,4;UBERON:0005409,1.56e-10,25;UBERON:0004909,9.46e-10,2;UBERON:0006955,1.22e-09,2;UBERON:0004801,1.22e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,1.18157981336281,0,1.10689594688802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51159648712566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.973033209536731,1.22206028986725,0,0,0,0,0,0,0,0,0,0,3.62972148145992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0.576361668616424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630265458457789,0.164831716762333,0.808842526250219,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0.472834243795189,1.36381929150995,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76872455576384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90154234056247,0,0.975343399858155,0,0,0,0,0,0,0,0,0,0,1.69783147837478,3.71551252856727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p5@HNF1A-AS1 | |||
}} |
Latest revision as of 21:07, 16 September 2015
Short description: | p5@HNF1A-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HNF1A-AS1_5end |
Coexpression cluster: | C690_duodenum_small_temporal_gall_colon_Neurons_Hepatocyte |
Association with transcript: | 0bp_to_ENST00000433033_5end |
EntrezGene: | NA |
HGNC: | 26785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 3.75e-18 | 1 |
seromucus secreting cell | 9.46e-10 | 2 |
epithelial cell of cervix | 1.22e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 3.75e-18 | 1 |
intestine | 4.57e-15 | 17 |
small intestine | 1.84e-14 | 4 |
gastrointestinal system | 1.56e-10 | 25 |
epithelium of gonad | 9.46e-10 | 2 |
uterine epithelium | 1.22e-09 | 2 |
cervix epithelium | 1.22e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 3.75e-18 | 1 |