FFCP PHASE1:Hg19::chr4:175443943..175443956,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3248 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5154 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=87bp_to_NR_027332,uc011ckh.1_5end | |||
|cluster_id=chr4:175443943..175443956,- | |||
|coexpression_cluster_id=C2787 | |||
|description=CAGE_peak_3_at_HPGD_5end | |||
|id=chr4:175443943..175443956,- | |||
|ontology_enrichment_celltype=CL:0002274!5.15e-09!5;CL:0000457!5.15e-09!5;CL:0002191!5.15e-09!5;CL:0000097!5.15e-09!5;CL:0000831!5.15e-09!5;CL:0002028!5.15e-09!5;CL:0002322!9.02e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.56e-21;5!CL:0002541;8.26e-14;3!CL:0000163;8.15e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.44e-21,5;CL:0002028,1.44e-21,5;CL:0002541,8.27e-14,3;CL:0000163,7.80e-12,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004921!6.41e-11!129;UBERON:0004185!6.41e-11!129;UBERON:0001007!1.09e-09!155;UBERON:0001555!1.09e-09!155;UBERON:0007026!1.09e-09!155;UBERON:0000077!8.29e-09!130;UBERON:0004119!1.96e-08!169;UBERON:0000925!1.96e-08!169;UBERON:0006595!1.96e-08!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;8.26e-14;3!UBERON:0000920;8.26e-14;3!UBERON:0004921;1.51e-10;33!UBERON:0000160;8.43e-10;17!UBERON:0005409;1.29e-09;22!UBERON:0000059;9.77e-09;11!UBERON:0004907;2.25e-07;5!UBERON:0001155;3.83e-07;9!UBERON:0005631;7.28e-07;10!UBERON:0000158;7.28e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,8.27e-14,3;UBERON:0003124,3.55e-10,7;UBERON:0000160,8.50e-10,17;UBERON:0000059,1.05e-08,11;UBERON:0004921,2.30e-08,118;UBERON:0005409,2.33e-08,25;UBERON:0004907,2.25e-07,5;UBERON:0005631,2.43e-07,14;UBERON:0000158,2.43e-07,14;UBERON:0001155,4.30e-07,9;UBERON:0001007,7.56e-07,145;UBERON:0001555,7.56e-07,145;UBERON:0007026,7.56e-07,145 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309977343527296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731842236777572,0.265059536642971,0.232387885739037,0.725627385107593,0.756962552626885,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,5.07020139287323,0.982827216677626,2.36315962672562,0,1.47586126251736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0.0895585227028483,0,0,20.1991927537337,10.3016667795474,5.1832028885193,5.76479813667846,4.92345490362882,0.253991577168676,0,0,0,0.205654985406647,0,3.14409075893636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.246381468041427,0,0,0.725156697549733,0,0.184161977871793,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,2.35359501941948,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0.383010740264733,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,8.07377904296203,0,0,0,0,1.30998378285754,0.439524537815682,0,0,0,1.67121139316383,0,0,0,0,0,0,0,0,1.38141957765574,0,0,0,0,0,0,0,0.887790650732402,0,0,0,0,0,0,0,1.44999915086959,0,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0,0,0,0,4.3221360726367,3.15496059865568,0,0.23056390438806,0,0,10.8460394308853,5.49585560411174,26.6517388009317,0,0,2.49317522850235,0,0.19606253431774,0,0,3.65554131654871,0,0,1.41353071433941,0,0,4.42287822516696,3.05515072466813,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0.284609546029793,0.138674673013139,0,0,0,0.698906672968121,0,0,0,0,2.13375836274523,0,0.225980740780532,0,0,0,2.73771935828724,0,0.213452994739353,0,1.44090417154106,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,2.32991899054908,0,0,0,0.0984274815147488,0,0,0,0.321506296930038,0.137539436597234,0,0.2249738915515,0.77380195455795,0.121499113316049,1.67717343799633,0.315222829196793,0.157363764404994,0,0,0,0,0,0,0,0,0.979762080328227,0,5.58229141095505,0,0,1.17241786942466,0,0,0,0.342173675768659,2.81926008926669,2.13574825135389,1.88645166119599,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.248385611765534,0.138348634936231,0,3.7912279385412,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0.225630985047772,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0,6.29786828154736,0,0,0,0,0,2.33585943973345,1.17739639275771,0,2.5224494698241,0.913158720509496,0.215927591218621,0,0.571812353413251,0,3.60348418641188,0,0,0.414432328326074,3.58508801897295,5.53007729451273,0,0,0,0,0.22910686854405,0,0,0,0,0.365753774946808,0,0.102662806856247,1.1598144313382,1.94284397223656,0,0,0,0,0,0,4.47610117026079,0.655678681511872,0,0.980593287015622,0,0,0,0.8453114551668,0,0.0939839179798536,0.644578879735772,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0.917899467677836,0,9.8327542502284,0.250707539292375,0.378893491091197,0,0,0,0.852935927603924,0.23806443146374,0.193766729508018,0.248298857183432,0,0,0,0.653150243690884,0,0.80822463617505,0.645499848534087,0.332660356546013,0,0,0,0.359300808426348,0,3.78948476966886,2.03448089157869,0.665756774185513,0.201273793591026,0 | |||
|short_description=p3@HPGD | |||
}} |
Latest revision as of 20:50, 16 September 2015
Short description: | p3@HPGD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HPGD_5end |
Coexpression cluster: | C2787_chorionic_Mast_small_acute_chronic_colon_testicular |
Association with transcript: | 87bp_to_NR_027332, uc011ckh.1_5end |
EntrezGene: | HPGD |
HGNC: | 5154 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.44e-21 | 5 |
basophil mast progenitor cell | 1.44e-21 | 5 |
chorionic membrane mesenchymal stem cell | 8.27e-14 | 3 |
endocrine cell | 7.80e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 8.27e-14 | 3 |
chorion | 3.55e-10 | 7 |
intestine | 8.50e-10 | 17 |
large intestine | 1.05e-08 | 11 |
subdivision of digestive tract | 2.30e-08 | 118 |
gastrointestinal system | 2.33e-08 | 25 |
lower digestive tract | 2.25e-07 | 5 |
extraembryonic membrane | 2.43e-07 | 14 |
membranous layer | 2.43e-07 | 14 |
colon | 4.30e-07 | 9 |
digestive system | 7.56e-07 | 145 |
digestive tract | 7.56e-07 | 145 |
primitive gut | 7.56e-07 | 145 |