FFCP PHASE1:Hg19::chr14:96722171..96722185,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=623 | |EntrezGene=623 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1029 | |HGNC=1029 | ||
|TSSclassifier=strong | |||
|UniProt=P46663 | |UniProt=P46663 | ||
|association_with_transcript=10bp_to_ENST00000216629_5end | |association_with_transcript=10bp_to_ENST00000216629_5end | ||
|cluster_id=chr14:96722171..96722185,+ | |||
|coexpression_cluster_id=C3470 | |coexpression_cluster_id=C3470 | ||
|description=CAGE_peak_3_at_BDKRB1_5end | |description=CAGE_peak_3_at_BDKRB1_5end | ||
|id=chr14:96722171..96722185,+ | |id=chr14:96722171..96722185,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.17e-24!180;CL:0000192!4.69e-21!42;CL:0000514!4.69e-21!42;CL:0000680!6.18e-19!57;CL:0000056!6.18e-19!57;CL:0000355!6.18e-19!57;CL:0000187!2.04e-17!54;CL:0000359!2.28e-15!32;CL:0000183!2.74e-15!59;CL:0000393!6.58e-15!60;CL:0000211!6.58e-15!60;CL:0002539!9.61e-15!10;CL:0000048!8.06e-14!430;CL:0000222!1.12e-13!119;CL:0000723!2.54e-13!436;CL:0000034!1.12e-12!444;CL:0000057!1.13e-09!75;CL:0000144!5.29e-09!625;CL:0002620!2.33e-08!23;CL:0000667!3.03e-08!6;CL:0000058!3.03e-08!6;CL:0000138!3.03e-08!6;CL:0000499!3.60e-08!27;CL:0000077!4.73e-08!19;CL:0000569!1.01e-07!4;CL:0000011!1.01e-07!4;CL:0000153!1.17e-07!9;CL:0000447!1.17e-07!9;CL:0002595!4.71e-07!5;CL:0002504!4.86e-07!3;CL:1000279!4.86e-07!3;CL:1000280!4.86e-07!3;CL:0002622!5.47e-07!3 | |ontology_enrichment_celltype=CL:0000055!2.17e-24!180;CL:0000192!4.69e-21!42;CL:0000514!4.69e-21!42;CL:0000680!6.18e-19!57;CL:0000056!6.18e-19!57;CL:0000355!6.18e-19!57;CL:0000187!2.04e-17!54;CL:0000359!2.28e-15!32;CL:0000183!2.74e-15!59;CL:0000393!6.58e-15!60;CL:0000211!6.58e-15!60;CL:0002539!9.61e-15!10;CL:0000048!8.06e-14!430;CL:0000222!1.12e-13!119;CL:0000723!2.54e-13!436;CL:0000034!1.12e-12!444;CL:0000057!1.13e-09!75;CL:0000144!5.29e-09!625;CL:0002620!2.33e-08!23;CL:0000667!3.03e-08!6;CL:0000058!3.03e-08!6;CL:0000138!3.03e-08!6;CL:0000499!3.60e-08!27;CL:0000077!4.73e-08!19;CL:0000569!1.01e-07!4;CL:0000011!1.01e-07!4;CL:0000153!1.17e-07!9;CL:0000447!1.17e-07!9;CL:0002595!4.71e-07!5;CL:0002504!4.86e-07!3;CL:1000279!4.86e-07!3;CL:1000280!4.86e-07!3;CL:0002622!5.47e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002195;7.04e-15;2!CL:0002571;7.04e-15;2!CL:0002504;5.41e-10;3!CL:1000279;5.41e-10;3!CL:1000280;5.41e-10;3!CL:0002622;5.41e-10;3!CL:0002599;9.78e-09;1!CL:0002568;4.10e-08;1!CL:0000192;1.51e-07;43!CL:0000153;1.81e-07;9!CL:0000447;1.81e-07;9!CL:0002595;9.46e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,7.84e-15,2;CL:0002571,7.84e-15,2;CL:0002622,3.58e-10,3;CL:0002504,7.13e-10,3;CL:1000279,7.13e-10,3;CL:1000280,7.13e-10,3;CL:0000192,2.87e-09,43;CL:0000514,2.87e-09,43;CL:0002599,9.79e-09,1;CL:0002568,2.69e-08,1;CL:0000222,2.20e-07,121;CL:0000153,2.45e-07,9;CL:0000447,2.45e-07,9;CL:0000187,5.30e-07,55;CL:0002595,9.33e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;1.51e-07;43 | |||
|ontology_enrichment_disease=DOID:0060072!2.84e-08!4;DOID:0060084!5.06e-07!3;DOID:127!5.06e-07!3;DOID:2394!5.11e-07!14 | |ontology_enrichment_disease=DOID:0060072!2.84e-08!4;DOID:0060084!5.06e-07!3;DOID:127!5.06e-07!3;DOID:2394!5.11e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:0060084;5.41e-10;3!DOID:127;5.41e-10;3!DOID:0060072;1.05e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,6.81e-10,3;DOID:127,6.81e-10,3;DOID:0060072,1.24e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001134!3.80e-17!61;UBERON:0002036!3.80e-17!61;UBERON:0003082!3.80e-17!61;UBERON:0001135!6.28e-17!15;UBERON:0004573!8.89e-17!33;UBERON:0004571!8.89e-17!33;UBERON:0002385!2.43e-16!63;UBERON:0001015!2.43e-16!63;UBERON:0000383!2.43e-16!63;UBERON:0004237!9.61e-15!10;UBERON:0004695!9.61e-15!10;UBERON:0002111!9.61e-15!10;UBERON:0004178!9.61e-15!10;UBERON:0004290!6.73e-14!70;UBERON:0000914!2.07e-13!83;UBERON:0002329!2.07e-13!83;UBERON:0003077!2.07e-13!83;UBERON:0003059!2.07e-13!83;UBERON:0007282!2.07e-13!83;UBERON:0009618!2.07e-13!83;UBERON:0007285!2.07e-13!83;UBERON:0001637!5.19e-12!42;UBERON:0003509!5.19e-12!42;UBERON:0004572!5.19e-12!42;UBERON:0000486!7.36e-12!82;UBERON:0005256!2.90e-10!143;UBERON:0000490!4.87e-09!138;UBERON:0000947!5.79e-09!21;UBERON:0010191!5.79e-09!21;UBERON:0001981!1.19e-08!60;UBERON:0007500!1.19e-08!60;UBERON:0004537!1.19e-08!60;UBERON:0006965!1.19e-08!60;UBERON:0004872!2.83e-08!84;UBERON:0003834!4.71e-07!5;UBERON:0001533!4.71e-07!5;UBERON:0000055!7.67e-07!69 | |ontology_enrichment_uberon=UBERON:0001134!3.80e-17!61;UBERON:0002036!3.80e-17!61;UBERON:0003082!3.80e-17!61;UBERON:0001135!6.28e-17!15;UBERON:0004573!8.89e-17!33;UBERON:0004571!8.89e-17!33;UBERON:0002385!2.43e-16!63;UBERON:0001015!2.43e-16!63;UBERON:0000383!2.43e-16!63;UBERON:0004237!9.61e-15!10;UBERON:0004695!9.61e-15!10;UBERON:0002111!9.61e-15!10;UBERON:0004178!9.61e-15!10;UBERON:0004290!6.73e-14!70;UBERON:0000914!2.07e-13!83;UBERON:0002329!2.07e-13!83;UBERON:0003077!2.07e-13!83;UBERON:0003059!2.07e-13!83;UBERON:0007282!2.07e-13!83;UBERON:0009618!2.07e-13!83;UBERON:0007285!2.07e-13!83;UBERON:0001637!5.19e-12!42;UBERON:0003509!5.19e-12!42;UBERON:0004572!5.19e-12!42;UBERON:0000486!7.36e-12!82;UBERON:0005256!2.90e-10!143;UBERON:0000490!4.87e-09!138;UBERON:0000947!5.79e-09!21;UBERON:0010191!5.79e-09!21;UBERON:0001981!1.19e-08!60;UBERON:0007500!1.19e-08!60;UBERON:0004537!1.19e-08!60;UBERON:0006965!1.19e-08!60;UBERON:0004872!2.83e-08!84;UBERON:0003834!4.71e-07!5;UBERON:0001533!4.71e-07!5;UBERON:0000055!7.67e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0001135;2.08e-07;15!UBERON:0003834;9.46e-07;5!UBERON:0001533;9.46e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.23e-07,15;UBERON:0003834,9.33e-07,5;UBERON:0001533,9.33e-07,5 | |||
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|short_description=p3@BDKRB1 | |short_description=p3@BDKRB1 | ||
}} | }} |
Latest revision as of 20:06, 16 September 2015
Short description: | p3@BDKRB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BDKRB1_5end |
Coexpression cluster: | C3470_Smooth_Mesothelial_mesothelioma_Synoviocyte_Prostate_normal_mesenchymal |
Association with transcript: | 10bp_to_ENST00000216629_5end |
EntrezGene: | BDKRB1 |
HGNC: | 1029 |
UniProt: | P46663 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 7.84e-15 | 2 |
hepatic mesenchymal stem cell | 7.84e-15 | 2 |
prostate stromal cell | 3.58e-10 | 3 |
enteric smooth muscle cell | 7.13e-10 | 3 |
smooth muscle cell of large intestine | 7.13e-10 | 3 |
smooth muscle cell of colon | 7.13e-10 | 3 |
smooth muscle cell | 2.87e-09 | 43 |
smooth muscle myoblast | 2.87e-09 | 43 |
smooth muscle cell of the esophagus | 9.79e-09 | 1 |
mesenchymal stem cell of Wharton's jelly | 2.69e-08 | 1 |
mesodermal cell | 2.20e-07 | 121 |
GAG secreting cell | 2.45e-07 | 9 |
carbohydrate secreting cell | 2.45e-07 | 9 |
muscle cell | 5.30e-07 | 55 |
smooth muscle cell of the subclavian artery | 9.33e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 2.23e-07 | 15 |
thoracic segment blood vessel | 9.33e-07 | 5 |
subclavian artery | 9.33e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 6.81e-10 | 3 |
leiomyoma | 6.81e-10 | 3 |
benign neoplasm | 1.24e-07 | 4 |