FFCP PHASE1:Hg19::chr19:19322758..19322773,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:19322758..19322773,+
|short_description=p1@NCAN
|description=CAGE_peak_1_at_NCAN_5end
|association_with_transcript=-8bp_to_ENST00000252575,ENST00000539499...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1463 | |EntrezGene=1463 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2465 | |HGNC=2465 | ||
|TSSclassifier=strong | |||
|UniProt=O14594,Q4LE67 | |UniProt=O14594,Q4LE67 | ||
|association_with_transcript=-8bp_to_ENST00000252575,ENST00000539499,NM_004386,uc002nlz.2_5end | |||
|cluster_id=chr19:19322758..19322773,+ | |||
|coexpression_cluster_id=C561 | |||
|description=CAGE_peak_1_at_NCAN_5end | |||
|id=chr19:19322758..19322773,+ | |||
|ontology_enrichment_celltype=CL:0000047!4.73e-14!8;CL:0002319!5.50e-14!25;CL:0000540!2.03e-10!6;CL:0000031!2.03e-10!6;CL:0000404!2.03e-10!6;CL:0000133!3.11e-08!59;CL:0002322!1.73e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002319;6.06e-11;25!CL:0000540;9.37e-11;6!CL:0000404;9.37e-11;6!CL:0002605;1.09e-07;3!CL:0000047;4.76e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.39e-16,8;CL:0002319,6.06e-11,25;CL:0000540,9.77e-11,6;CL:0000031,9.77e-11,6;CL:0000404,9.77e-11,6;CL:0002605,1.04e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.92e-18;82!CL:0000031;9.37e-11;6!UBERON:0006241;1.47e-08;3!UBERON:0003057;1.47e-08;3!UBERON:0006215;4.19e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.10e-86!82;UBERON:0005743!3.49e-84!86;UBERON:0000073!1.07e-81!94;UBERON:0001016!1.07e-81!94;UBERON:0001049!4.07e-78!57;UBERON:0005068!4.07e-78!57;UBERON:0006241!4.07e-78!57;UBERON:0007135!4.07e-78!57;UBERON:0000955!1.47e-65!69;UBERON:0006238!1.47e-65!69;UBERON:0002616!1.56e-65!59;UBERON:0002346!5.37e-61!90;UBERON:0002780!1.25e-59!41;UBERON:0001890!1.25e-59!41;UBERON:0006240!1.25e-59!41;UBERON:0003075!2.93e-58!86;UBERON:0007284!2.93e-58!86;UBERON:0003080!6.42e-58!42;UBERON:0001893!1.29e-55!34;UBERON:0002020!2.88e-55!34;UBERON:0003528!2.88e-55!34;UBERON:0002791!7.84e-54!33;UBERON:0001869!2.52e-52!32;UBERON:0000924!2.39e-45!173;UBERON:0006601!2.39e-45!173;UBERON:0004121!8.03e-43!169;UBERON:0003056!7.67e-42!61;UBERON:0000956!7.75e-41!25;UBERON:0000203!7.75e-41!25;UBERON:0002619!1.29e-36!22;UBERON:0000033!1.43e-33!123;UBERON:0001950!3.06e-33!20;UBERON:0000153!2.12e-32!129;UBERON:0007811!2.12e-32!129;UBERON:0007023!4.75e-30!115;UBERON:0003076!2.80e-20!15;UBERON:0003057!2.80e-20!15;UBERON:0004732!5.88e-17!13;UBERON:0002420!6.86e-16!9;UBERON:0007245!6.86e-16!9;UBERON:0010009!6.86e-16!9;UBERON:0010011!6.86e-16!9;UBERON:0000454!6.86e-16!9;UBERON:0000025!7.36e-16!194;UBERON:0004733!1.22e-15!12;UBERON:0002028!1.22e-15!12;UBERON:0007277!1.22e-15!12;UBERON:0002308!1.43e-15!9;UBERON:0000125!1.43e-15!9;UBERON:0009663!1.41e-12!7;UBERON:0000200!1.67e-11!6;UBERON:0001871!2.05e-11!7;UBERON:0002680!2.50e-11!9;UBERON:0001895!2.50e-11!9;UBERON:0010092!2.50e-11!9;UBERON:0002298!1.91e-10!8;UBERON:0000064!2.15e-10!219;UBERON:0004111!3.03e-10!241;UBERON:0000349!4.77e-10!5;UBERON:0001872!4.86e-10!5;UBERON:0002021!5.72e-10!5;UBERON:0000483!4.26e-09!309;UBERON:0000119!7.54e-09!312;UBERON:0000477!3.58e-08!286;UBERON:0000369!4.07e-08!4;UBERON:0002435!4.07e-08!4;UBERON:0000204!4.07e-08!4;UBERON:0010082!4.07e-08!4;UBERON:0000475!1.04e-07!365;UBERON:0002037!6.75e-07!6;UBERON:0006215!6.75e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.45e-69;34!UBERON:0003528;7.44e-69;34!UBERON:0002020;7.44e-69;34!UBERON:0001869;1.20e-68;32!UBERON:0002791;1.89e-68;32!UBERON:0002780;1.58e-61;41!UBERON:0001890;1.58e-61;41!UBERON:0000956;2.50e-59;25!UBERON:0000203;2.50e-59;25!UBERON:0000073;2.87e-59;53!UBERON:0002616;2.87e-59;53!UBERON:0002619;3.80e-53;22!UBERON:0001950;3.37e-48;20!UBERON:0000955;1.02e-40;68!UBERON:0001017;3.25e-39;75!UBERON:0001016;7.34e-34;83!UBERON:0002420;1.64e-22;9!UBERON:0007245;1.64e-22;9!UBERON:0010009;1.64e-22;9!UBERON:0010011;1.64e-22;9!UBERON:0000454;1.64e-22;9!UBERON:0000125;4.81e-22;9!UBERON:0002308;4.81e-22;9!UBERON:0004732;9.78e-21;13!UBERON:0004733;7.38e-19;12!UBERON:0002028;7.38e-19;12!UBERON:0009663;1.17e-17;7!UBERON:0000200;4.52e-16;6!UBERON:0002298;8.30e-15;6!UBERON:0000349;5.91e-14;5!UBERON:0001871;6.11e-14;6!UBERON:0001872;6.48e-14;5!UBERON:0002021;7.21e-14;5!UBERON:0007023;5.67e-13;114!UBERON:0002680;9.67e-13;9!UBERON:0001895;9.67e-13;9!UBERON:0011216;6.91e-12;132!UBERON:0000369;3.84e-11;4!UBERON:0002435;3.84e-11;4!UBERON:0000204;3.84e-11;4!UBERON:0002784;6.07e-10;4!UBERON:0001870;5.21e-09;3!UBERON:0001894;9.84e-09;7!UBERON:0005383;1.36e-08;3!UBERON:0005382;1.36e-08;3!UBERON:0002240;1.47e-08;3!UBERON:0005174;1.47e-08;3!UBERON:0001137;1.47e-08;3!UBERON:0000988;1.98e-08;3!UBERON:0001896;4.64e-08;3!UBERON:0005290;4.64e-08;3!UBERON:0010314;8.33e-08;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.74e-114,81;UBERON:0001049,2.44e-113,56;UBERON:0005068,2.44e-113,56;UBERON:0006241,2.44e-113,56;UBERON:0007135,2.44e-113,56;UBERON:0001016,4.96e-108,89;UBERON:0000073,6.74e-106,53;UBERON:0002616,6.74e-106,53;UBERON:0000955,3.10e-90,68;UBERON:0006238,3.10e-90,68;UBERON:0002780,1.77e-87,41;UBERON:0001890,1.77e-87,41;UBERON:0003080,1.77e-87,41;UBERON:0006240,1.77e-87,41;UBERON:0001893,4.03e-81,34;UBERON:0003528,1.32e-80,34;UBERON:0002020,1.32e-80,34;UBERON:0003075,2.26e-76,82;UBERON:0007284,2.26e-76,82;UBERON:0001869,2.79e-76,32;UBERON:0002791,5.44e-76,32;UBERON:0002346,3.34e-72,86;UBERON:0010371,8.40e-60,104;UBERON:0000956,2.17e-59,25;UBERON:0000203,2.17e-59,25;UBERON:0003056,1.59e-58,61;UBERON:0002619,3.48e-53,22;UBERON:0004121,2.25e-51,171;UBERON:0000924,2.25e-51,171;UBERON:0006601,2.25e-51,171;UBERON:0001950,3.16e-48,20;UBERON:0010314,2.31e-44,132;UBERON:0007023,4.78e-41,114;UBERON:0011216,3.71e-40,223;UBERON:0000025,5.21e-26,192;UBERON:0003076,1.67e-25,15;UBERON:0003057,1.67e-25,15;UBERON:0002420,1.62e-22,9;UBERON:0007245,1.62e-22,9;UBERON:0010009,1.62e-22,9;UBERON:0010011,1.62e-22,9;UBERON:0000454,1.62e-22,9;UBERON:0000125,4.75e-22,9;UBERON:0002308,4.75e-22,9;UBERON:0004732,9.58e-21,13;UBERON:0004733,7.68e-19,12;UBERON:0002028,7.68e-19,12;UBERON:0007277,7.68e-19,12;UBERON:0004111,4.53e-18,240;UBERON:0009663,1.15e-17,7;UBERON:0000200,4.29e-16,6;UBERON:0002298,8.41e-15,6;UBERON:0000349,5.75e-14,5;UBERON:0001872,5.91e-14,5;UBERON:0001871,5.97e-14,6;UBERON:0002021,7.50e-14,5;UBERON:0002680,1.03e-12,9;UBERON:0001895,1.03e-12,9;UBERON:0010092,1.03e-12,9;UBERON:0000483,1.04e-12,306;UBERON:0000119,1.87e-12,309;UBERON:0000369,3.79e-11,4;UBERON:0002435,3.79e-11,4;UBERON:0000204,3.79e-11,4;UBERON:0010082,3.79e-11,4;UBERON:0002784,6.00e-10,4;UBERON:0001870,5.21e-09,3;UBERON:0001894,9.93e-09,7;UBERON:0006222,9.93e-09,7;UBERON:0005383,1.35e-08,3;UBERON:0005382,1.35e-08,3;UBERON:0002240,1.45e-08,3;UBERON:0005174,1.45e-08,3;UBERON:0001137,1.45e-08,3;UBERON:0000988,2.09e-08,3;UBERON:0001896,4.47e-08,3;UBERON:0005290,4.47e-08,3;UBERON:0010096,4.47e-08,3;UBERON:0000923,7.51e-07,560;UBERON:0010316,7.51e-07,560;UBERON:0005291,7.51e-07,560;UBERON:0006598,7.51e-07,560;UBERON:0010317,7.51e-07,560;UBERON:0002532,7.51e-07,560 | |||
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| ||
|short_description=p1@NCAN | |||
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Latest revision as of 19:32, 16 September 2015
Short description: | p1@NCAN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NCAN_5end |
Coexpression cluster: | C561_brain_Neural_spinal_Neurons_parietal_temporal_occipital |
Association with transcript: | -8bp_to_ENST00000252575, ENST00000539499, NM_004386, uc002nlz.2_5end |
EntrezGene: | NCAN |
HGNC: | 2465 |
UniProt: | O14594Q4LE67 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.39e-16 | 8 |
neural cell | 6.06e-11 | 25 |
neuron | 9.77e-11 | 6 |
neuroblast | 9.77e-11 | 6 |
electrically signaling cell | 9.77e-11 | 6 |
astrocyte of the cerebral cortex | 1.04e-07 | 3 |