FFCP PHASE1:Hg19::chr9:15553484..15553501,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=203238 | |EntrezGene=203238 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29828 | |HGNC=29828 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=195bp_to_ENST00000474193_5end | |association_with_transcript=195bp_to_ENST00000474193_5end | ||
|cluster_id=chr9:15553484..15553501,+ | |||
|description=CAGE_peak_8_at_C9orf93_5end | |description=CAGE_peak_8_at_C9orf93_5end | ||
|id=chr9:15553484..15553501,+ | |id=chr9:15553484..15553501,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000037;9.37e-11;1!CL:0001024;9.37e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,8.95e-11,1 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.62e-10;1 | |||
|ontology_enrichment_disease=DOID:0060058!4.79e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:3371;2.62e-10;1!DOID:4549;2.62e-10;1!DOID:5861;2.62e-10;1!DOID:6496;2.62e-10;1!DOID:0060058;6.94e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.73e-10,1;DOID:4549,1.73e-10,1;DOID:5861,1.73e-10,1;DOID:6496,1.73e-10,1;DOID:0060058,6.50e-09,10;DOID:2531,4.49e-08,51;DOID:0060083,4.49e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0000073!6.43e-14!94;UBERON:0001016!6.43e-14!94;UBERON:0001017!3.64e-13!82;UBERON:0002346!4.61e-13!90;UBERON:0001049!5.73e-13!57;UBERON:0005068!5.73e-13!57;UBERON:0006241!5.73e-13!57;UBERON:0007135!5.73e-13!57;UBERON:0005743!5.66e-12!86;UBERON:0000955!3.34e-11!69;UBERON:0006238!3.34e-11!69;UBERON:0003075!4.93e-11!86;UBERON:0007284!4.93e-11!86;UBERON:0002616!2.15e-10!59;UBERON:0000153!5.07e-10!129;UBERON:0007811!5.07e-10!129;UBERON:0000924!1.63e-09!173;UBERON:0006601!1.63e-09!173;UBERON:0002020!3.40e-09!34;UBERON:0003528!3.40e-09!34;UBERON:0002780!3.59e-09!41;UBERON:0001890!3.59e-09!41;UBERON:0006240!3.59e-09!41;UBERON:0001869!5.19e-09!32;UBERON:0001893!5.84e-09!34;UBERON:0003080!8.52e-09!42;UBERON:0002791!2.96e-08!33;UBERON:0004121!4.27e-08!169;UBERON:0000033!5.19e-08!123;UBERON:0003056!6.80e-08!61;UBERON:0002619!1.02e-07!22;UBERON:0000956!1.64e-07!25;UBERON:0000203!1.64e-07!25 | |ontology_enrichment_uberon=UBERON:0000073!6.43e-14!94;UBERON:0001016!6.43e-14!94;UBERON:0001017!3.64e-13!82;UBERON:0002346!4.61e-13!90;UBERON:0001049!5.73e-13!57;UBERON:0005068!5.73e-13!57;UBERON:0006241!5.73e-13!57;UBERON:0007135!5.73e-13!57;UBERON:0005743!5.66e-12!86;UBERON:0000955!3.34e-11!69;UBERON:0006238!3.34e-11!69;UBERON:0003075!4.93e-11!86;UBERON:0007284!4.93e-11!86;UBERON:0002616!2.15e-10!59;UBERON:0000153!5.07e-10!129;UBERON:0007811!5.07e-10!129;UBERON:0000924!1.63e-09!173;UBERON:0006601!1.63e-09!173;UBERON:0002020!3.40e-09!34;UBERON:0003528!3.40e-09!34;UBERON:0002780!3.59e-09!41;UBERON:0001890!3.59e-09!41;UBERON:0006240!3.59e-09!41;UBERON:0001869!5.19e-09!32;UBERON:0001893!5.84e-09!34;UBERON:0003080!8.52e-09!42;UBERON:0002791!2.96e-08!33;UBERON:0004121!4.27e-08!169;UBERON:0000033!5.19e-08!123;UBERON:0003056!6.80e-08!61;UBERON:0002619!1.02e-07!22;UBERON:0000956!1.64e-07!25;UBERON:0000203!1.64e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;9.35e-20;2!UBERON:0005058;9.35e-20;2!UBERON:0009113;9.35e-20;2!UBERON:0001154;2.62e-10;1!UBERON:0001153;2.62e-10;1!UBERON:0009854;2.62e-10;1!UBERON:0004177;1.89e-08;5!UBERON:0005057;1.89e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.51e-10,4;UBERON:0005058,2.51e-10,4;UBERON:0009113,2.51e-10,4;UBERON:0003295,2.51e-10,4;UBERON:0005562,2.51e-10,4;UBERON:0001154,3.29e-10,1;UBERON:0001153,3.29e-10,1;UBERON:0001045,3.29e-10,1;UBERON:0003351,3.66e-07,6 | |||
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| ||
|short_description=p8@C9orf93 | |short_description=p8@C9orf93 | ||
}} | }} |
Latest revision as of 19:25, 16 September 2015
Short description: | p8@C9orf93 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_C9orf93_5end |
Coexpression cluster: | NA |
Association with transcript: | 195bp_to_ENST00000474193_5end |
EntrezGene: | C9orf93 |
HGNC: | 29828 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 8.95e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.51e-10 | 4 |
hemolymphoid system gland | 2.51e-10 | 4 |
thymic region | 2.51e-10 | 4 |
pharyngeal gland | 2.51e-10 | 4 |
thymus primordium | 2.51e-10 | 4 |
vermiform appendix | 3.29e-10 | 1 |
caecum | 3.29e-10 | 1 |
midgut | 3.29e-10 | 1 |
pharyngeal epithelium | 3.66e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.73e-10 | 1 |
extraosseous chondrosarcoma | 1.73e-10 | 1 |
myxoid chondrosarcoma | 1.73e-10 | 1 |
extraskeletal myxoid chondrosarcoma | 1.73e-10 | 1 |
lymphoma | 6.50e-09 | 10 |
hematologic cancer | 4.49e-08 | 51 |
immune system cancer | 4.49e-08 | 51 |