FFCP PHASE1:Hg19::chr7:141695671..141695688,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8972 | |EntrezGene=8972 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7043 | |HGNC=7043 | ||
|TSSclassifier=strong | |||
|UniProt=E7ER45,E9PEQ5,O43451 | |UniProt=E7ER45,E9PEQ5,O43451 | ||
|association_with_transcript=0bp_to_ENST00000475668,ENST00000497673,NM_004668,uc003vwy.2_5end | |association_with_transcript=0bp_to_ENST00000475668,ENST00000497673,NM_004668,uc003vwy.2_5end | ||
|cluster_id=chr7:141695671..141695688,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_MGAM_5end | |description=CAGE_peak_1_at_MGAM_5end | ||
|id=chr7:141695671..141695688,+ | |id=chr7:141695671..141695688,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002535;5.19e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,5.02e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.09e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!2.18e-19!11;UBERON:0006947!4.41e-19!3;UBERON:0004054!4.41e-19!3;UBERON:0003101!2.73e-16!22;UBERON:0000079!2.73e-16!22;UBERON:0005904!1.89e-14!4;UBERON:0000473!3.20e-12!8;UBERON:0000160!9.91e-10!27;UBERON:0005409!1.50e-09!35;UBERON:0005156!2.38e-08!59;UBERON:0000990!2.38e-08!59;UBERON:0001301!1.12e-07!1;UBERON:0001000!1.74e-07!1;UBERON:0005352!1.74e-07!1;UBERON:0000998!2.52e-07!1;UBERON:0006868!2.52e-07!1;UBERON:0001154!3.85e-07!1;UBERON:0001153!3.85e-07!1;UBERON:0002363!7.40e-07!1;UBERON:0007647!7.40e-07!1;UBERON:0010115!7.40e-07!1;UBERON:0003133!7.48e-07!48 | |ontology_enrichment_uberon=UBERON:0003135!2.18e-19!11;UBERON:0006947!4.41e-19!3;UBERON:0004054!4.41e-19!3;UBERON:0003101!2.73e-16!22;UBERON:0000079!2.73e-16!22;UBERON:0005904!1.89e-14!4;UBERON:0000473!3.20e-12!8;UBERON:0000160!9.91e-10!27;UBERON:0005409!1.50e-09!35;UBERON:0005156!2.38e-08!59;UBERON:0000990!2.38e-08!59;UBERON:0001301!1.12e-07!1;UBERON:0001000!1.74e-07!1;UBERON:0005352!1.74e-07!1;UBERON:0000998!2.52e-07!1;UBERON:0006868!2.52e-07!1;UBERON:0001154!3.85e-07!1;UBERON:0001153!3.85e-07!1;UBERON:0002363!7.40e-07!1;UBERON:0007647!7.40e-07!1;UBERON:0010115!7.40e-07!1;UBERON:0003133!7.48e-07!48 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.20e-24;4!UBERON:0003135;1.90e-19;11!UBERON:0006947;8.69e-19;3!UBERON:0004054;8.69e-19;3!UBERON:0001301;6.22e-15;1!UBERON:0003101;6.63e-15;22!UBERON:0000079;6.63e-15;22!UBERON:0001000;1.61e-14;1!UBERON:0005352;1.61e-14;1!UBERON:0005904;2.41e-14;4!UBERON:0000160;3.13e-12;17!UBERON:0005409;1.26e-09;22!UBERON:0006955;5.19e-08;2!UBERON:0004801;5.19e-08;2!UBERON:0000473;1.91e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.20e-24,4;UBERON:0003135,1.85e-19,11;UBERON:0006947,8.69e-19,3;UBERON:0004054,8.69e-19,3;UBERON:0001301,6.22e-15,1;UBERON:0003101,6.63e-15,22;UBERON:0000079,6.63e-15,22;UBERON:0001000,1.61e-14,1;UBERON:0005352,1.61e-14,1;UBERON:0005904,2.41e-14,4;UBERON:0000160,3.13e-12,17;UBERON:0005409,1.54e-08,25;UBERON:0006955,5.02e-08,2;UBERON:0004801,5.02e-08,2;UBERON:0005156,9.69e-08,59;UBERON:0000990,9.69e-08,59;UBERON:0000473,1.88e-07,8;UBERON:0003133,7.42e-07,48 | |||
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|short_description=p1@MGAM | |short_description=p1@MGAM | ||
}} | }} |
Latest revision as of 19:18, 16 September 2015
Short description: | p1@MGAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MGAM_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000475668, ENST00000497673, NM_004668, uc003vwy.2_5end |
EntrezGene: | MGAM |
HGNC: | 7043 |
UniProt: | E7ER45E9PEQ5O43451 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 5.02e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
small intestine | 1.20e-24 | 4 |
male reproductive organ | 1.85e-19 | 11 |
male genital duct | 8.69e-19 | 3 |
internal male genitalia | 8.69e-19 | 3 |
epididymis | 6.22e-15 | 1 |
male organism | 6.63e-15 | 22 |
male reproductive system | 6.63e-15 | 22 |
vas deferens | 1.61e-14 | 1 |
spermatic cord | 1.61e-14 | 1 |
duct of male reproductive system | 2.41e-14 | 4 |
intestine | 3.13e-12 | 17 |
gastrointestinal system | 1.54e-08 | 25 |
uterine epithelium | 5.02e-08 | 2 |
cervix epithelium | 5.02e-08 | 2 |
reproductive structure | 9.69e-08 | 59 |
reproductive system | 9.69e-08 | 59 |
testis | 1.88e-07 | 8 |
reproductive organ | 7.42e-07 | 48 |