FFCP PHASE1:Hg19::chr14:95081081..95081092,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=12 | |EntrezGene=12 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=16 | |HGNC=16 | ||
|TSSclassifier=strong | |||
|UniProt=P01011 | |UniProt=P01011 | ||
|association_with_transcript=239bp_to_J05176_5end | |association_with_transcript=239bp_to_J05176_5end | ||
|cluster_id=chr14:95081081..95081092,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_13_at_SERPINA3_5end | |description=CAGE_peak_13_at_SERPINA3_5end | ||
|id=chr14:95081081..95081092,+ | |id=chr14:95081081..95081092,+ | ||
|ontology_enrichment_celltype=CL:0000746!2.75e-11!3;CL:0000513!2.75e-11!3;CL:0000181!6.54e-10!12;CL:0000417!6.54e-10!12;CL:0000668!6.54e-10!12;CL:0000414!6.54e-10!12;CL:0000412!6.54e-10!12;CL:0000182!6.54e-10!12;CL:0000737!1.47e-08!4 | |ontology_enrichment_celltype=CL:0000746!2.75e-11!3;CL:0000513!2.75e-11!3;CL:0000181!6.54e-10!12;CL:0000417!6.54e-10!12;CL:0000668!6.54e-10!12;CL:0000414!6.54e-10!12;CL:0000412!6.54e-10!12;CL:0000182!6.54e-10!12;CL:0000737!1.47e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0000746;6.60e-25;3!CL:0000737;5.90e-19;4!CL:0000182;2.00e-14;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,7.02e-25,3;CL:0000513,7.02e-25,3;CL:0000737,6.18e-19,4;CL:0000182,2.00e-14,12 | |||
|ontology_enrichment_development_v019=CL:0000513;6.60e-25;3!UBERON:0004161;1.56e-07;11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;4.64e-24;19!UBERON:0006925;4.64e-24;19!UBERON:0002423;2.47e-18;25!UBERON:0002365;8.72e-15;31!UBERON:0002330;8.72e-15;31!UBERON:0002368;8.10e-13;33!UBERON:0000949;3.00e-12;43!UBERON:0003127;3.27e-10;2!UBERON:0005172;1.01e-09;52!UBERON:0005173;1.01e-09;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.64e-24,19;UBERON:0006925,4.64e-24,19;UBERON:0008836,4.64e-24,19;UBERON:0008835,8.28e-21,22;UBERON:0003894,8.28e-21,22;UBERON:0009854,6.52e-20,23;UBERON:0007499,2.47e-18,25;UBERON:0009497,2.47e-18,25;UBERON:0000015,2.47e-18,25;UBERON:0002423,2.47e-18,25;UBERON:0006235,2.47e-18,25;UBERON:0004161,2.47e-18,25;UBERON:0009856,1.23e-17,26;UBERON:0002365,8.16e-15,31;UBERON:0002330,8.16e-15,31;UBERON:0000949,1.85e-14,45;UBERON:0002368,3.91e-13,35;UBERON:0005172,5.50e-12,54;UBERON:0005173,5.50e-12,54;UBERON:0005177,5.25e-11,101;UBERON:0002417,8.99e-11,60;UBERON:0000916,8.99e-11,60;UBERON:0003127,3.58e-10,2;UBERON:0003929,1.56e-08,54;UBERON:0002100,2.04e-08,199;UBERON:0002530,8.22e-08,59;UBERON:0009569,1.39e-07,112;UBERON:0001041,2.31e-07,87;UBERON:0003914,2.85e-07,117;UBERON:0005256,5.90e-07,122;UBERON:0003104,9.53e-07,160;UBERON:0009142,9.53e-07,160;UBERON:0001048,9.61e-07,160 | |||
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| ||
|short_description=p13@SERPINA3 | |short_description=p13@SERPINA3 | ||
}} | }} |
Latest revision as of 18:51, 16 September 2015
Short description: | p13@SERPINA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SERPINA3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 239bp_to_J05176_5end |
EntrezGene: | SERPINA3 |
HGNC: | 16 |
UniProt: | P01011 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 7.02e-25 | 3 |
cardiac muscle myoblast | 7.02e-25 | 3 |
striated muscle cell | 6.18e-19 | 4 |
hepatocyte | 2.00e-14 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 4.64e-24 | 19 |
digestive gland | 4.64e-24 | 19 |
liver bud | 4.64e-24 | 19 |
hepatic diverticulum | 8.28e-21 | 22 |
liver primordium | 8.28e-21 | 22 |
digestive tract diverticulum | 6.52e-20 | 23 |
epithelial sac | 2.47e-18 | 25 |
epithelium of foregut-midgut junction | 2.47e-18 | 25 |
anatomical boundary | 2.47e-18 | 25 |
hepatobiliary system | 2.47e-18 | 25 |
foregut-midgut junction | 2.47e-18 | 25 |
septum transversum | 2.47e-18 | 25 |
sac | 1.23e-17 | 26 |
exocrine gland | 8.16e-15 | 31 |
exocrine system | 8.16e-15 | 31 |
endocrine system | 1.85e-14 | 45 |
endocrine gland | 3.91e-13 | 35 |
abdomen element | 5.50e-12 | 54 |
abdominal segment element | 5.50e-12 | 54 |
trunk region element | 5.25e-11 | 101 |
abdominal segment of trunk | 8.99e-11 | 60 |
abdomen | 8.99e-11 | 60 |
open tracheal system trachea | 3.58e-10 | 2 |
gut epithelium | 1.56e-08 | 54 |
trunk | 2.04e-08 | 199 |
gland | 8.22e-08 | 59 |
subdivision of trunk | 1.39e-07 | 112 |
foregut | 2.31e-07 | 87 |
epithelial tube | 2.85e-07 | 117 |
trunk mesenchyme | 5.90e-07 | 122 |
mesenchyme | 9.53e-07 | 160 |
entire embryonic mesenchyme | 9.53e-07 | 160 |
primordium | 9.61e-07 | 160 |