FFCP PHASE1:Hg19::chr16:48281444..48281451,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85320 | |EntrezGene=85320 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14639 | |HGNC=14639 | ||
|TSSclassifier=strong | |||
|UniProt=F5H410 | |UniProt=F5H410 | ||
|association_with_transcript=27bp_to_ENST00000537808,uc010vgl.1_5end | |association_with_transcript=27bp_to_ENST00000537808,uc010vgl.1_5end | ||
|cluster_id=chr16:48281444..48281451,- | |||
|coexpression_cluster_id=C108 | |coexpression_cluster_id=C108 | ||
|description=CAGE_peak_2_at_ABCC11_5end | |description=CAGE_peak_2_at_ABCC11_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002327!1.31e-07!4 | |ontology_enrichment_celltype=CL:0002327!1.31e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002327;7.35e-18;4 | |ontology_enrichment_celltype_v019=CL:0002327;7.35e-18;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002327,7.35e-18,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.23e-66;1!UBERON:0007297;5.96e-34;2!UBERON:0003056;3.66e-23;3 | |ontology_enrichment_development_v019=UBERON:0008425;1.23e-66;1!UBERON:0007297;5.96e-34;2!UBERON:0003056;3.66e-23;3 | ||
|ontology_enrichment_disease=DOID:5093!1.31e-07!4;DOID:1612!1.31e-07!4 | |ontology_enrichment_disease=DOID:5093!1.31e-07!4;DOID:1612!1.31e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:5093;7.35e-18;4!DOID:1612;7.35e-18;4 | |ontology_enrichment_disease_v019=DOID:5093;7.35e-18;4!DOID:1612;7.35e-18;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,7.35e-18,4;DOID:1612,7.35e-18,4 | |||
|ontology_enrichment_uberon=UBERON:0002950!5.15e-50!2;UBERON:0001891!5.15e-50!2;UBERON:0009616!5.15e-50!2;UBERON:0001301!2.78e-26!1;UBERON:0006122!4.61e-26!1;UBERON:0002038!7.62e-26!1;UBERON:0009661!7.62e-26!1;UBERON:0000007!1.07e-13!2;UBERON:0002298!2.34e-13!8;UBERON:0000310!5.41e-11!10;UBERON:0001443!4.42e-10!11;UBERON:0006947!1.10e-09!3;UBERON:0004054!1.10e-09!3;UBERON:0006331!1.54e-09!3;UBERON:0007023!7.59e-08!115;UBERON:0001911!1.31e-07!4;UBERON:0005333!1.31e-07!4;UBERON:0008425!1.31e-07!4;UBERON:0005311!1.31e-07!4;UBERON:0005904!1.40e-07!4;UBERON:0003296!1.69e-07!4;UBERON:0010133!1.69e-07!4;UBERON:0002370!2.04e-07!4;UBERON:0005058!2.04e-07!4;UBERON:0009113!2.04e-07!4;UBERON:0003295!2.04e-07!4;UBERON:0005562!2.04e-07!4;UBERON:0003056!8.13e-07!61 | |ontology_enrichment_uberon=UBERON:0002950!5.15e-50!2;UBERON:0001891!5.15e-50!2;UBERON:0009616!5.15e-50!2;UBERON:0001301!2.78e-26!1;UBERON:0006122!4.61e-26!1;UBERON:0002038!7.62e-26!1;UBERON:0009661!7.62e-26!1;UBERON:0000007!1.07e-13!2;UBERON:0002298!2.34e-13!8;UBERON:0000310!5.41e-11!10;UBERON:0001443!4.42e-10!11;UBERON:0006947!1.10e-09!3;UBERON:0004054!1.10e-09!3;UBERON:0006331!1.54e-09!3;UBERON:0007023!7.59e-08!115;UBERON:0001911!1.31e-07!4;UBERON:0005333!1.31e-07!4;UBERON:0008425!1.31e-07!4;UBERON:0005311!1.31e-07!4;UBERON:0005904!1.40e-07!4;UBERON:0003296!1.69e-07!4;UBERON:0010133!1.69e-07!4;UBERON:0002370!2.04e-07!4;UBERON:0005058!2.04e-07!4;UBERON:0009113!2.04e-07!4;UBERON:0003295!2.04e-07!4;UBERON:0005562!2.04e-07!4;UBERON:0003056!8.13e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;3.34e-66;1!UBERON:0006947;3.66e-23;3!UBERON:0004054;3.66e-23;3!UBERON:0001911;7.35e-18;4!UBERON:0005904;9.45e-18;4!UBERON:0000966;1.71e-14;5!UBERON:0005388;1.71e-14;5!UBERON:0001802;1.71e-14;5!UBERON:0000310;5.73e-08;10!UBERON:0000058;6.34e-08;10!UBERON:0001443;2.32e-07;11!UBERON:0003135;2.55e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0001301;3.34e-66;1!UBERON:0006947;3.66e-23;3!UBERON:0004054;3.66e-23;3!UBERON:0001911;7.35e-18;4!UBERON:0005904;9.45e-18;4!UBERON:0000966;1.71e-14;5!UBERON:0005388;1.71e-14;5!UBERON:0001802;1.71e-14;5!UBERON:0000310;5.73e-08;10!UBERON:0000058;6.34e-08;10!UBERON:0001443;2.32e-07;11!UBERON:0003135;2.55e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,2.39e-66,1;UBERON:0006947,3.27e-23,3;UBERON:0004054,3.27e-23,3;UBERON:0001911,7.35e-18,4;UBERON:0005333,7.35e-18,4;UBERON:0008425,7.35e-18,4;UBERON:0005311,7.35e-18,4;UBERON:0005904,8.69e-18,4;UBERON:0000966,2.74e-12,6;UBERON:0005388,2.74e-12,6;UBERON:0001802,2.74e-12,6;UBERON:0005085,1.20e-09,31;UBERON:0000076,1.24e-09,8;UBERON:0005103,1.35e-09,8;UBERON:0000083,1.35e-09,8;UBERON:0009201,1.35e-09,8;UBERON:0006553,1.35e-09,8;UBERON:0003074,1.35e-09,8;UBERON:0003060,1.35e-09,8;UBERON:0000080,1.12e-08,9;UBERON:0002120,1.12e-08,9;UBERON:0004875,1.12e-08,9;UBERON:0005721,1.12e-08,9;UBERON:0005754,1.12e-08,9;UBERON:0007297,1.12e-08,9;UBERON:0000310,5.73e-08,10;UBERON:0001443,2.32e-07,11;UBERON:0003135,2.47e-07,11;UBERON:0004876,2.47e-07,11;UBERON:0003887,7.92e-07,12 | |||
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|short_description=p2@ABCC11 | |short_description=p2@ABCC11 | ||
}} | }} |
Latest revision as of 18:51, 16 September 2015
Short description: | p2@ABCC11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ABCC11_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | 27bp_to_ENST00000537808, uc010vgl.1_5end |
EntrezGene: | ABCC11 |
HGNC: | 14639 |
UniProt: | F5H410 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 7.35e-18 | 4 |
Ontology term | p-value | n |
---|---|---|
epididymis | 2.39e-66 | 1 |
male genital duct | 3.27e-23 | 3 |
internal male genitalia | 3.27e-23 | 3 |
mammary gland | 7.35e-18 | 4 |
mammary bud | 7.35e-18 | 4 |
mammary ridge | 7.35e-18 | 4 |
mammary placode | 7.35e-18 | 4 |
duct of male reproductive system | 8.69e-18 | 4 |
retina | 2.74e-12 | 6 |
photoreceptor array | 2.74e-12 | 6 |
posterior segment of eyeball | 2.74e-12 | 6 |
ectodermal placode | 1.20e-09 | 31 |
external ectoderm | 1.24e-09 | 8 |
mesonephric epithelium | 1.35e-09 | 8 |
mesonephric tubule | 1.35e-09 | 8 |
nephric duct | 1.35e-09 | 8 |
renal duct | 1.35e-09 | 8 |
mesonephric duct | 1.35e-09 | 8 |
pronephric duct | 1.35e-09 | 8 |
mesonephros | 1.12e-08 | 9 |
pronephros | 1.12e-08 | 9 |
nephrogenic cord | 1.12e-08 | 9 |
pronephric mesoderm | 1.12e-08 | 9 |
rostral part of nephrogenic cord | 1.12e-08 | 9 |
presumptive pronephric mesoderm | 1.12e-08 | 9 |
breast | 5.73e-08 | 10 |
chest | 2.32e-07 | 11 |
male reproductive organ | 2.47e-07 | 11 |
urogenital ridge | 2.47e-07 | 11 |
intraembryonic coelom | 7.92e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 7.35e-18 | 4 |
breast cancer | 7.35e-18 | 4 |