FFCP PHASE1:Hg19::chr14:95080900..95080909,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=12 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=16 | |||
|TSSclassifier=strong | |||
|UniProt=P01011 | |||
|association_with_transcript=58bp_to_J05176_5end | |||
|cluster_id=chr14:95080900..95080909,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_17_at_SERPINA3_5end | |||
|id=chr14:95080900..95080909,+ | |||
|ontology_enrichment_celltype=CL:0000181!6.45e-14!12;CL:0000417!6.45e-14!12;CL:0000668!6.45e-14!12;CL:0000414!6.45e-14!12;CL:0000412!6.45e-14!12;CL:0000182!6.45e-14!12;CL:0002549!2.66e-10!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.42e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.42e-22,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.90e-11;11!UBERON:0009497;1.11e-09;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.29e-17!115;UBERON:0002107!4.23e-15!19;UBERON:0006925!4.23e-15!19;UBERON:0008836!4.23e-15!19;UBERON:0005057!2.48e-13!26;UBERON:0008835!7.37e-13!22;UBERON:0003894!7.37e-13!22;UBERON:0009854!3.05e-12!23;UBERON:0007499!3.72e-11!25;UBERON:0009497!3.72e-11!25;UBERON:0000015!3.72e-11!25;UBERON:0002423!3.72e-11!25;UBERON:0006235!3.72e-11!25;UBERON:0004161!3.72e-11!25;UBERON:0000949!8.85e-11!45;UBERON:0009856!1.12e-10!26;UBERON:0001873!1.66e-10!2;UBERON:0010122!1.66e-10!2;UBERON:0003947!2.66e-10!2;UBERON:0005629!2.66e-10!2;UBERON:0005358!2.66e-10!2;UBERON:0001886!2.66e-10!2;UBERON:0004086!2.66e-10!2;UBERON:0005282!2.66e-10!2;UBERON:0005281!2.66e-10!2;UBERON:0002368!1.31e-09!35;UBERON:0005177!7.56e-09!107;UBERON:0002365!9.67e-09!31;UBERON:0002330!9.67e-09!31;UBERON:0002417!1.08e-08!61;UBERON:0000916!1.08e-08!61;UBERON:0002308!1.97e-08!9;UBERON:0000125!1.97e-08!9;UBERON:0005743!2.60e-08!86;UBERON:0005172!3.05e-08!55;UBERON:0005173!3.05e-08!55;UBERON:0001017!1.25e-07!82;UBERON:0001049!2.41e-07!57;UBERON:0005068!2.41e-07!57;UBERON:0006241!2.41e-07!57;UBERON:0007135!2.41e-07!57;UBERON:0005383!2.85e-07!3;UBERON:0005382!2.85e-07!3;UBERON:0000073!2.95e-07!94;UBERON:0001016!2.95e-07!94;UBERON:0002240!3.13e-07!3;UBERON:0003075!3.53e-07!86;UBERON:0007284!3.53e-07!86;UBERON:0002300!3.89e-07!3;UBERON:0002616!5.20e-07!59;UBERON:0002346!9.64e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.71e-37;19!UBERON:0006925;1.71e-37;19!UBERON:0002423;1.24e-28;25!UBERON:0002365;4.01e-23;31!UBERON:0002330;4.01e-23;31!UBERON:0002368;5.41e-20;33!UBERON:0000949;4.57e-19;43!UBERON:0005172;1.90e-10;52!UBERON:0005173;1.90e-10;52!UBERON:0002417;4.29e-08;58!UBERON:0000916;4.29e-08;58!UBERON:0002530;1.25e-07;57!UBERON:0001007;1.69e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.77e-37,19;UBERON:0006925,1.77e-37,19;UBERON:0008836,1.77e-37,19;UBERON:0008835,1.90e-32,22;UBERON:0003894,1.90e-32,22;UBERON:0009854,4.62e-31,23;UBERON:0007499,1.27e-28,25;UBERON:0009497,1.27e-28,25;UBERON:0000015,1.27e-28,25;UBERON:0002423,1.27e-28,25;UBERON:0006235,1.27e-28,25;UBERON:0004161,1.27e-28,25;UBERON:0009856,1.53e-27,26;UBERON:0002365,3.50e-23,31;UBERON:0002330,3.50e-23,31;UBERON:0000949,7.09e-23,45;UBERON:0002368,1.37e-20,35;UBERON:0003929,1.72e-13,54;UBERON:0005172,1.72e-13,54;UBERON:0005173,1.72e-13,54;UBERON:0002530,2.23e-12,59;UBERON:0002417,3.53e-12,60;UBERON:0000916,3.53e-12,60;UBERON:0005177,2.38e-10,101;UBERON:0005911,5.41e-09,82;UBERON:0001041,1.72e-08,87 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.0132552232746,15.725235466842,17.7236972004421,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485560759068186,0,0,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.157566364614447,0.247247575143499,0.26961417541674,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.551639951094387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.20692508597262,5.30027555648885,0,0.13223260174269,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.47059807863165,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.891139200981258,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0.430333232356058,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p17@SERPINA3 | |||
}} |
Latest revision as of 18:45, 16 September 2015
Short description: | p17@SERPINA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_SERPINA3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 58bp_to_J05176_5end |
EntrezGene: | SERPINA3 |
HGNC: | 16 |
UniProt: | P01011 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.42e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.77e-37 | 19 |
digestive gland | 1.77e-37 | 19 |
liver bud | 1.77e-37 | 19 |
hepatic diverticulum | 1.90e-32 | 22 |
liver primordium | 1.90e-32 | 22 |
digestive tract diverticulum | 4.62e-31 | 23 |
epithelial sac | 1.27e-28 | 25 |
epithelium of foregut-midgut junction | 1.27e-28 | 25 |
anatomical boundary | 1.27e-28 | 25 |
hepatobiliary system | 1.27e-28 | 25 |
foregut-midgut junction | 1.27e-28 | 25 |
septum transversum | 1.27e-28 | 25 |
sac | 1.53e-27 | 26 |
exocrine gland | 3.50e-23 | 31 |
exocrine system | 3.50e-23 | 31 |
endocrine system | 7.09e-23 | 45 |
endocrine gland | 1.37e-20 | 35 |
gut epithelium | 1.72e-13 | 54 |
abdomen element | 1.72e-13 | 54 |
abdominal segment element | 1.72e-13 | 54 |
gland | 2.23e-12 | 59 |
abdominal segment of trunk | 3.53e-12 | 60 |
abdomen | 3.53e-12 | 60 |
trunk region element | 2.38e-10 | 101 |
endo-epithelium | 5.41e-09 | 82 |
foregut | 1.72e-08 | 87 |