FFCP PHASE1:Hg19::chr11:130059981..130060005,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6768 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11344 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=45bp_to_ENST00000524718_5end | |||
|cluster_id=chr11:130059981..130060005,+ | |||
|coexpression_cluster_id=C190 | |||
|description=CAGE_peak_5_at_ST14_5end | |||
|id=chr11:130059981..130060005,+ | |||
|ontology_enrichment_celltype=CL:0002009!4.92e-11!65;CL:0000840!8.64e-10!5;CL:0001029!8.64e-10!5;CL:0000557!1.26e-09!71;CL:0002194!3.83e-09!63;CL:0000576!3.83e-09!63;CL:0000040!3.83e-09!63;CL:0000559!3.83e-09!63;CL:0000235!4.49e-08!10;CL:0000839!9.62e-08!70;CL:0002619!1.15e-07!3;CL:0000766!9.22e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.88e-18;6!CL:0000840;1.25e-10;5!CL:0002619;6.81e-10;3!CL:0000990;3.01e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.16e-18,6;CL:0002009,9.36e-14,61;CL:0000557,2.38e-12,67;CL:0002194,6.12e-12,59;CL:0000576,6.12e-12,59;CL:0000040,6.12e-12,59;CL:0000559,6.12e-12,59;CL:0000840,9.39e-11,5;CL:0001029,9.39e-11,5;CL:0000839,1.72e-10,66;CL:0002619,6.51e-10,3;CL:0000766,1.80e-09,72;CL:0000763,3.16e-08,108;CL:0000049,3.16e-08,108;CL:0000990,2.50e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.50e-08;1!UBERON:0010115;2.50e-08;1!UBERON:0006242;4.89e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.81e-12!115;UBERON:0005409!1.16e-10!35;UBERON:0004921!1.63e-08!129;UBERON:0004185!1.63e-08!129;UBERON:0000160!5.07e-08!27;UBERON:0002371!6.21e-08!80;UBERON:0000062!3.28e-07!511;UBERON:0001007!5.00e-07!155;UBERON:0001555!5.00e-07!155;UBERON:0007026!5.00e-07!155;UBERON:0001474!5.16e-07!86;UBERON:0002405!6.32e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;5.35e-24;17!UBERON:0005409;2.08e-23;22!UBERON:0000059;3.50e-16;11!UBERON:0004921;2.02e-14;33!UBERON:0002108;4.97e-13;4!UBERON:0001155;5.36e-13;9!UBERON:0002363;2.50e-08;1!UBERON:0001154;2.50e-08;1!UBERON:0001153;2.50e-08;1!UBERON:0009854;2.50e-08;1!UBERON:0001301;4.89e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.34e-24,17;UBERON:0005409,1.80e-20,25;UBERON:0000059,3.45e-16,11;UBERON:0001155,5.28e-13,9;UBERON:0002108,6.37e-13,4;UBERON:0002371,1.19e-10,76;UBERON:0001474,1.00e-09,82;UBERON:0004765,1.11e-08,90;UBERON:0002363,2.17e-08,1;UBERON:0007645,2.17e-08,1;UBERON:0007647,2.17e-08,1;UBERON:0010115,2.17e-08,1;UBERON:0002405,2.46e-08,93;UBERON:0001154,2.50e-08,1;UBERON:0001153,2.50e-08,1;UBERON:0001045,2.50e-08,1;UBERON:0001301,7.16e-08,1;UBERON:0002390,8.31e-08,98;UBERON:0003061,8.31e-08,98;UBERON:0001434,1.31e-07,100;UBERON:0002193,6.76e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,1.11957737119962,0.32389366601898,1.80302897343931,0.290796477559129,0,0.242584061187816,0,0,0,0,0,0,0.344745680736619,0,0,0,0.272906150057846,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,1.39303789839414,1.99436940778298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21595305478658,0.702012795417713,1.78357394746474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,6.14481528616916,6.71028323677248,6.67396566847634,0,0,0,0,0,0,2.99424864653152,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,2.48655523978033,0,0,0,0,0,0.179021174675609,0,0.887790650732402,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,4.97630965539252,6.5458597732471,26.8853263770795,0,0,0,0,0,0,0.182454789215666,0,0,0,3.62972148145992,0,2.59064976476801,0,0,0,0,0,0,0,0,0.347119476670262,0.0979923974143777,0,1.04836000945218,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,1.49417096317547,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,1.5476039091159,0,0,0.0788057072991982,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,1.32506888912221,0,0,0,0,0.854299300541557,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0.261906694481422,0,0.739280431085226,0,0,0,0,0,0,0.496211178389294,0,0.383287282918786,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,0,4.56579360254748,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,4.14520944939716,0,0,0,0,0,0,0,0,0,0,8.72067986619775,1.31135736302374,0.470317296361523,0.245148321753905,0,0,0,0,0,0.0939839179798536,0,0,0.178553938605658,0,0,2.19100916473955,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0.213233981900981,0,0,0.124149428591716,0,0.0636471582781649,0,0.435433495793923,0,0.134704106029175,0.502055437748735,0,0.0814032686109745,0,0,0.269475606319761,0,0,0,0.665756774185513,0,0 | |||
|short_description=p5@ST14 | |||
}} |
Latest revision as of 18:21, 16 September 2015
Short description: | p5@ST14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ST14_5end |
Coexpression cluster: | C190_colon_small_rectum_duodenum_appendix_temporal_oral |
Association with transcript: | 45bp_to_ENST00000524718_5end |
EntrezGene: | ST14 |
HGNC: | 11344 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.16e-18 | 6 |
macrophage dendritic cell progenitor | 9.36e-14 | 61 |
granulocyte monocyte progenitor cell | 2.38e-12 | 67 |
monopoietic cell | 6.12e-12 | 59 |
monocyte | 6.12e-12 | 59 |
monoblast | 6.12e-12 | 59 |
promonocyte | 6.12e-12 | 59 |
immature conventional dendritic cell | 9.39e-11 | 5 |
common dendritic progenitor | 9.39e-11 | 5 |
myeloid lineage restricted progenitor cell | 1.72e-10 | 66 |
adult endothelial progenitor cell | 6.51e-10 | 3 |
myeloid leukocyte | 1.80e-09 | 72 |
myeloid cell | 3.16e-08 | 108 |
common myeloid progenitor | 3.16e-08 | 108 |
conventional dendritic cell | 2.50e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.34e-24 | 17 |
gastrointestinal system | 1.80e-20 | 25 |
large intestine | 3.45e-16 | 11 |
colon | 5.28e-13 | 9 |
small intestine | 6.37e-13 | 4 |
bone marrow | 1.19e-10 | 76 |
bone element | 1.00e-09 | 82 |
skeletal element | 1.11e-08 | 90 |
dura mater | 2.17e-08 | 1 |
future meninx | 2.17e-08 | 1 |
ectomeninx | 2.17e-08 | 1 |
future dura mater | 2.17e-08 | 1 |
immune system | 2.46e-08 | 93 |
vermiform appendix | 2.50e-08 | 1 |
caecum | 2.50e-08 | 1 |
midgut | 2.50e-08 | 1 |
epididymis | 7.16e-08 | 1 |
hematopoietic system | 8.31e-08 | 98 |
blood island | 8.31e-08 | 98 |
skeletal system | 1.31e-07 | 100 |
hemolymphoid system | 6.76e-07 | 108 |