FFCP PHASE1:Hg19::chr3:171489162..171489172,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5337 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9067 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=2bp_to_ENST00000489995_5end | |||
|cluster_id=chr3:171489162..171489172,- | |||
|description=CAGE_peak_6_at_PLD1_5end | |||
|id=chr3:171489162..171489172,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.51e-09;1!UBERON:0010227;4.51e-09;1!UBERON:0004140;4.51e-09;1!UBERON:0006242;1.13e-08;1!UBERON:0004874;1.13e-08;1!UBERON:0005062;2.88e-08;4!UBERON:0007284;2.88e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.26e-16!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;7.34e-20;17!UBERON:0005409;2.26e-15;22!UBERON:0002108;2.08e-14;4!UBERON:0000948;1.03e-11;22!UBERON:0000059;3.50e-11;11!UBERON:0003978;9.80e-11;3!UBERON:0000946;9.80e-11;3!UBERON:0007100;3.01e-10;25!UBERON:0004921;1.61e-09;33!UBERON:0002079;4.51e-09;1!UBERON:0001052;1.03e-08;4!UBERON:0000989;1.13e-08;1!UBERON:0002135;1.13e-08;1!UBERON:0002146;1.13e-08;1!UBERON:0008811;1.13e-08;1!UBERON:0005623;1.13e-08;1!UBERON:0000922;4.14e-08;49!UBERON:0001155;4.83e-08;9!UBERON:0004907;3.94e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.40e-20,17;UBERON:0002108,1.95e-14,4;UBERON:0005409,1.17e-13,25;UBERON:0000059,2.26e-11,11;UBERON:0003978,5.98e-11,3;UBERON:0009751,5.98e-11,3;UBERON:0000946,5.98e-11,3;UBERON:0002523,5.98e-11,3;UBERON:0005983,5.98e-11,3;UBERON:0002165,5.98e-11,3;UBERON:0002062,5.98e-11,3;UBERON:0007280,5.98e-11,3;UBERON:0000948,1.06e-10,24;UBERON:0005498,1.06e-10,24;UBERON:0004140,1.06e-10,24;UBERON:0009881,1.06e-10,24;UBERON:0004141,1.06e-10,24;UBERON:0003084,1.06e-10,24;UBERON:0007005,1.06e-10,24;UBERON:0004139,1.06e-10,24;UBERON:0004291,1.06e-10,24;UBERON:0004797,4.92e-10,7;UBERON:0007100,1.86e-09,27;UBERON:0002079,5.28e-09,1;UBERON:0000989,5.70e-09,1;UBERON:0008811,5.70e-09,1;UBERON:0006258,5.70e-09,1;UBERON:0005876,5.70e-09,1;UBERON:0004874,5.70e-09,1;UBERON:0002146,6.65e-09,1;UBERON:0005623,6.65e-09,1;UBERON:0002135,9.02e-09,1;UBERON:0001052,9.39e-09,4;UBERON:0001155,3.40e-08,9;UBERON:0004907,3.66e-07,5 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.236132343941038,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0.694281003215189,0,0,0,0,0,0,0,0,0.760272105718513,0.24406205754817,0.367663080345869,0,0,0.673588117878509,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,1.14734648299525,0,1.12135520028461,0,0,0.311211035399766,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0.277064115484183,0,0,0.300476117813194,0.226864366320042,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0.484938170456436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0.614942192715568,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0.432359860250884,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0.797814349754612,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0.157702415033935,0,0.300946099727719,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0.496215615637554,0.153461973288062,0,0.128139149255701,0.511707249066704,0.321707842287215,0,0,0.177561725313127,0.0821271560138091,0,0,0.483437798366489,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.824328093181778,0,0,0,0.650060246036521,0,0,0.154048617114644,0,0,0.214840489736547,0.145016693914229,0.0852266274161009,0.356128142586949,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0.429374660225974,0,0.316379424718726,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0.731140468893853,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851692475380653,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.293016358543788,0,0.222886768554957,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0,2.19172787076177,0,0.755798243562828,0.20453736500431,0.738508832766417,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0,0,0,0,0,0,0.219385397153973,0,0.697118721393016,0.461701551022782,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,3.24582959613137,0,1.94606641907346,1.83309043480088,0,0,0,0.202203398942031,0.802577647298789,0,0,0.19566461893209,0,0,1.20990716048664,0,0.505492637027904,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0.34945333648406,0,0,0,0,0.581934098930517,0,0.90392296312213,0,0,0.0633107959558787,0,0,1.70762395791482,0.19980960958213,0,0,0.514784993585894,0,0.124252535565433,0,0,0,0,0,0,0.136905378891993,0,0,0,1.67569440763353,1.83328339209347,0,0.599037001496973,0.858452096273142,0.669514372325618,2.21705459206197,0.360299883542404,0,0,0,0,0.196854963029498,0.0846733320657845,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0.0788057072991982,0.157363764404994,0,0.179287339332845,0,2.1440859791201,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0.258565912723101,0.13223260174269,0,0,0.320362237703084,0.628817220398664,0,0.496166021811951,0,0,0,0,0.7520696820681,0,1.31149052283922,0,0,0.122026264901963,0,0,0.332787154610557,0.434674820589684,0,0,0,0.570930667089935,0,0,0,0.149254802886874,0,0,0,0,0,0.228840068396924,0.302461847526478,0,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0.231522474323834,0,0.358177682162975,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0.490696182767533,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0.636008701306837,0,0,0.352675943690684,0.3062454773532,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,1.42899623863589,0,1.56302802246618,0,0,0.147856086217045,0.135075169236789,0,0,0.19024743058172,0,0.548257766857182,1.98484471355718,0,0,0,0.336283722218824,0,0.227662191351298,0,0,0,0.135939465953663,0,0,0,0.470958557103084,0,0.560544326627578,2.73947616152849,0,0,1.21510125100316,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0.975343399858155,0,0.205325613712494,1.1598144313382,0,1.16969731731053,0,0,0,0,0,3.00979216620984,4.5897507705831,0,0.735444965261716,0,0.392616934229891,0.891139200981258,1.6906229103336,0,0.375935671919414,0.193373663920732,0.199882311849858,0.357107877211315,0,0,0,0.458729283404541,0.573358332605805,0,0.135982980381829,0,1.5870805215462,0.371995018166751,0,0,0,0,0,0,0,0,0,0.682008283964155,0,0,0.310298987585686,0,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| |||
|short_description=p6@PLD1 | |||
}} |
Latest revision as of 17:25, 16 September 2015
Short description: | p6@PLD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PLD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_ENST00000489995_5end |
EntrezGene: | PLD1 |
HGNC: | 9067 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 4.40e-20 | 17 |
small intestine | 1.95e-14 | 4 |
gastrointestinal system | 1.17e-13 | 25 |
large intestine | 2.26e-11 | 11 |
valve | 5.98e-11 | 3 |
cardiac mesenchyme | 5.98e-11 | 3 |
cardial valve | 5.98e-11 | 3 |
tunica intima | 5.98e-11 | 3 |
heart layer | 5.98e-11 | 3 |
endocardium | 5.98e-11 | 3 |
endocardial cushion | 5.98e-11 | 3 |
presumptive endocardium | 5.98e-11 | 3 |
heart | 1.06e-10 | 24 |
primitive heart tube | 1.06e-10 | 24 |
primary heart field | 1.06e-10 | 24 |
anterior lateral plate mesoderm | 1.06e-10 | 24 |
heart tube | 1.06e-10 | 24 |
heart primordium | 1.06e-10 | 24 |
cardiac mesoderm | 1.06e-10 | 24 |
cardiogenic plate | 1.06e-10 | 24 |
heart rudiment | 1.06e-10 | 24 |
blood vessel layer | 4.92e-10 | 7 |
primary circulatory organ | 1.86e-09 | 27 |
left cardiac atrium | 5.28e-09 | 1 |
penis | 5.70e-09 | 1 |
intromittent organ | 5.70e-09 | 1 |
lateral plate mesenchyme | 5.70e-09 | 1 |
undifferentiated genital tubercle | 5.70e-09 | 1 |
somatopleure | 5.70e-09 | 1 |
pulmonary valve | 6.65e-09 | 1 |
semi-lunar valve | 6.65e-09 | 1 |
mitral valve | 9.02e-09 | 1 |
rectum | 9.39e-09 | 4 |
colon | 3.40e-08 | 9 |
lower digestive tract | 3.66e-07 | 5 |