FFCP PHASE1:Hg19::chr5:160973976..160974001,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2561 | |EntrezGene=2561 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4082 | |HGNC=4082 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-175bp_to_uc011deh.1,uc011dei.1_5end | |association_with_transcript=-175bp_to_uc011deh.1,uc011dei.1_5end | ||
|cluster_id=chr5:160973976..160974001,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_6_at_GABRB2_5end | |description=CAGE_peak_6_at_GABRB2_5end | ||
|id=chr5:160973976..160974001,- | |id=chr5:160973976..160974001,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.55e-16;82!UBERON:0010122;5.27e-14;2!UBERON:0006222;7.59e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!5.15e-65!34;UBERON:0002020!9.85e-65!34;UBERON:0003528!9.85e-65!34;UBERON:0002780!4.40e-64!41;UBERON:0001890!4.40e-64!41;UBERON:0006240!4.40e-64!41;UBERON:0002791!2.21e-62!33;UBERON:0003080!2.32e-62!42;UBERON:0001049!6.46e-62!57;UBERON:0005068!6.46e-62!57;UBERON:0006241!6.46e-62!57;UBERON:0007135!6.46e-62!57;UBERON:0001869!9.16e-61!32;UBERON:0002616!1.80e-59!59;UBERON:0000955!2.40e-57!69;UBERON:0006238!2.40e-57!69;UBERON:0001017!2.48e-54!82;UBERON:0005743!2.76e-51!86;UBERON:0002619!3.82e-50!22;UBERON:0000073!1.45e-47!94;UBERON:0001016!1.45e-47!94;UBERON:0001950!1.19e-45!20;UBERON:0000956!1.29e-43!25;UBERON:0000203!1.29e-43!25;UBERON:0003075!5.44e-42!86;UBERON:0007284!5.44e-42!86;UBERON:0007023!6.17e-42!115;UBERON:0002346!8.13e-42!90;UBERON:0003056!3.23e-40!61;UBERON:0000033!1.15e-30!123;UBERON:0000153!1.05e-28!129;UBERON:0007811!1.05e-28!129;UBERON:0000924!3.27e-24!173;UBERON:0006601!3.27e-24!173;UBERON:0004121!8.51e-24!169;UBERON:0002420!3.05e-23!9;UBERON:0007245!3.05e-23!9;UBERON:0010009!3.05e-23!9;UBERON:0010011!3.05e-23!9;UBERON:0000454!3.05e-23!9;UBERON:0002308!1.54e-22!9;UBERON:0000125!1.54e-22!9;UBERON:0009663!3.05e-18!7;UBERON:0000200!2.13e-17!6;UBERON:0000025!3.33e-17!194;UBERON:0001871!1.05e-16!7;UBERON:0001872!1.13e-14!5;UBERON:0000349!1.15e-13!5;UBERON:0004111!2.53e-12!241;UBERON:0000369!1.36e-11!4;UBERON:0002435!1.36e-11!4;UBERON:0000204!1.36e-11!4;UBERON:0010082!1.36e-11!4;UBERON:0000064!1.22e-10!219;UBERON:0002298!2.97e-10!8;UBERON:0002021!8.38e-10!5;UBERON:0002771!2.11e-09!3;UBERON:0000477!2.79e-09!286;UBERON:0005383!5.18e-09!3;UBERON:0005382!5.18e-09!3;UBERON:0000483!2.26e-08!309;UBERON:0000119!3.49e-08!312;UBERON:0006331!4.73e-08!3;UBERON:0000988!6.88e-08!3;UBERON:0001870!4.24e-07!2;UBERON:0004733!7.62e-07!12;UBERON:0002028!7.62e-07!12;UBERON:0007277!7.62e-07!12 | |ontology_enrichment_uberon=UBERON:0001893!5.15e-65!34;UBERON:0002020!9.85e-65!34;UBERON:0003528!9.85e-65!34;UBERON:0002780!4.40e-64!41;UBERON:0001890!4.40e-64!41;UBERON:0006240!4.40e-64!41;UBERON:0002791!2.21e-62!33;UBERON:0003080!2.32e-62!42;UBERON:0001049!6.46e-62!57;UBERON:0005068!6.46e-62!57;UBERON:0006241!6.46e-62!57;UBERON:0007135!6.46e-62!57;UBERON:0001869!9.16e-61!32;UBERON:0002616!1.80e-59!59;UBERON:0000955!2.40e-57!69;UBERON:0006238!2.40e-57!69;UBERON:0001017!2.48e-54!82;UBERON:0005743!2.76e-51!86;UBERON:0002619!3.82e-50!22;UBERON:0000073!1.45e-47!94;UBERON:0001016!1.45e-47!94;UBERON:0001950!1.19e-45!20;UBERON:0000956!1.29e-43!25;UBERON:0000203!1.29e-43!25;UBERON:0003075!5.44e-42!86;UBERON:0007284!5.44e-42!86;UBERON:0007023!6.17e-42!115;UBERON:0002346!8.13e-42!90;UBERON:0003056!3.23e-40!61;UBERON:0000033!1.15e-30!123;UBERON:0000153!1.05e-28!129;UBERON:0007811!1.05e-28!129;UBERON:0000924!3.27e-24!173;UBERON:0006601!3.27e-24!173;UBERON:0004121!8.51e-24!169;UBERON:0002420!3.05e-23!9;UBERON:0007245!3.05e-23!9;UBERON:0010009!3.05e-23!9;UBERON:0010011!3.05e-23!9;UBERON:0000454!3.05e-23!9;UBERON:0002308!1.54e-22!9;UBERON:0000125!1.54e-22!9;UBERON:0009663!3.05e-18!7;UBERON:0000200!2.13e-17!6;UBERON:0000025!3.33e-17!194;UBERON:0001871!1.05e-16!7;UBERON:0001872!1.13e-14!5;UBERON:0000349!1.15e-13!5;UBERON:0004111!2.53e-12!241;UBERON:0000369!1.36e-11!4;UBERON:0002435!1.36e-11!4;UBERON:0000204!1.36e-11!4;UBERON:0010082!1.36e-11!4;UBERON:0000064!1.22e-10!219;UBERON:0002298!2.97e-10!8;UBERON:0002021!8.38e-10!5;UBERON:0002771!2.11e-09!3;UBERON:0000477!2.79e-09!286;UBERON:0005383!5.18e-09!3;UBERON:0005382!5.18e-09!3;UBERON:0000483!2.26e-08!309;UBERON:0000119!3.49e-08!312;UBERON:0006331!4.73e-08!3;UBERON:0000988!6.88e-08!3;UBERON:0001870!4.24e-07!2;UBERON:0004733!7.62e-07!12;UBERON:0002028!7.62e-07!12;UBERON:0007277!7.62e-07!12 | ||
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|ontology_enrichment_uberon_v019_2=UBERON:0001869,2.67e-103,32;UBERON:0001950,6.72e-101,20;UBERON:0001893,3.67e-97,34;UBERON:0002791,3.12e-94,32;UBERON:0002619,7.90e-92,22;UBERON:0003528,1.28e-88,34;UBERON:0002020,1.28e-88,34;UBERON:0002780,1.35e-87,41;UBERON:0001890,1.35e-87,41;UBERON:0003080,1.35e-87,41;UBERON:0006240,1.35e-87,41;UBERON:0000956,7.74e-81,25;UBERON:0000203,7.74e-81,25;UBERON:0000073,3.74e-73,53;UBERON:0002616,3.74e-73,53;UBERON:0001049,4.50e-69,56;UBERON:0005068,4.50e-69,56;UBERON:0006241,4.50e-69,56;UBERON:0007135,4.50e-69,56;UBERON:0000955,2.94e-65,68;UBERON:0006238,2.94e-65,68;UBERON:0001017,1.25e-58,81;UBERON:0003056,5.91e-58,61;UBERON:0001016,1.92e-52,89;UBERON:0003075,4.79e-46,82;UBERON:0007284,4.79e-46,82;UBERON:0002346,1.01e-43,86;UBERON:0000200,1.93e-40,6;UBERON:0007023,3.08e-38,114;UBERON:0010371,1.87e-35,104;UBERON:0001872,1.02e-33,5;UBERON:0010314,1.70e-29,132;UBERON:0000369,3.92e-26,4;UBERON:0002435,3.92e-26,4;UBERON:0000204,3.92e-26,4;UBERON:0010082,3.92e-26,4;UBERON:0002420,1.61e-25,9;UBERON:0007245,1.61e-25,9;UBERON:0010009,1.61e-25,9;UBERON:0010011,1.61e-25,9;UBERON:0000454,1.61e-25,9;UBERON:0004121,1.69e-25,171;UBERON:0000924,1.69e-25,171;UBERON:0006601,1.69e-25,171;UBERON:0001871,1.03e-23,6;UBERON:0002021,2.58e-22,5;UBERON:0001870,1.70e-21,3;UBERON:0011216,4.73e-20,223;UBERON:0005383,8.42e-20,3;UBERON:0005382,8.42e-20,3;UBERON:0000025,3.48e-17,192;UBERON:0009663,4.78e-15,7;UBERON:0002702,6.91e-15,2;UBERON:0002771,2.21e-14,2;UBERON:0001876,4.04e-14,2;UBERON:0001873,7.87e-14,2;UBERON:0010122,7.87e-14,2;UBERON:0004111,7.99e-13,240;UBERON:0000349,1.64e-12,5;UBERON:0000125,9.53e-12,9;UBERON:0002308,9.53e-12,9;UBERON:0000483,4.83e-09,306;UBERON:0000119,6.58e-09,309;UBERON:0002902,2.19e-08,1;UBERON:0009899,2.19e-08,1;UBERON:0002581,2.71e-08,1;UBERON:0002022,3.11e-08,1;UBERON:0007190,3.58e-08,1;UBERON:0001882,4.40e-08,1;UBERON:0005403,4.40e-08,1;UBERON:0003112,6.63e-08,1;UBERON:0011158,6.63e-08,1;UBERON:0003128,6.63e-08,1;UBERON:0001703,6.63e-08,1;UBERON:0002241,6.63e-08,1;UBERON:0004761,6.63e-08,1;UBERON:0009617,6.63e-08,1;UBERON:0001874,1.06e-07,1 | |||
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|short_description=p6@GABRB2 | |short_description=p6@GABRB2 | ||
}} | }} |
Latest revision as of 17:01, 16 September 2015
Short description: | p6@GABRB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GABRB2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -175bp_to_uc011deh.1, uc011dei.1_5end |
EntrezGene: | GABRB2 |
HGNC: | 4082 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data