FFCP PHASE1:Hg19::chr13:114566984..114567018,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2621 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4168 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000476291_5end | |||
|cluster_id=chr13:114566984..114567018,- | |||
|description=CAGE_peak_1_at_GAS6_5end | |||
|id=chr13:114566984..114567018,- | |||
|ontology_enrichment_celltype=CL:0000055!1.11e-26!180;CL:0000057!7.34e-17!75;CL:0000680!3.49e-14!57;CL:0000056!3.49e-14!57;CL:0000355!3.49e-14!57;CL:0000192!8.82e-14!42;CL:0000514!8.82e-14!42;CL:0000222!1.05e-13!119;CL:0000183!3.00e-13!59;CL:0000187!6.54e-13!54;CL:0000220!6.66e-12!246;CL:0002321!1.30e-11!248;CL:0000359!7.21e-11!32;CL:0000393!3.67e-10!60;CL:0000211!3.67e-10!60;CL:0002620!1.93e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.53e-10;32!CL:0000192;3.69e-10;43!CL:0002620;1.72e-08;23!CL:0000187;1.47e-07;55!CL:0000057;3.33e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.18e-17,76;CL:0000680,2.44e-14,58;CL:0000056,2.44e-14,58;CL:0000355,2.44e-14,58;CL:0000192,6.73e-14,43;CL:0000514,6.73e-14,43;CL:0000222,1.50e-13,121;CL:0000187,4.66e-13,55;CL:0002321,3.19e-11,250;CL:0000359,5.97e-11,32;CL:0000393,2.63e-10,61;CL:0000211,2.63e-10,61;CL:0002620,1.68e-08,23 | |||
|ontology_enrichment_development_v019=CL:0000514;3.69e-10;43!CL:0000355;9.22e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.83e-22!365;UBERON:0000468!2.25e-20!659;UBERON:0005256!5.64e-20!143;UBERON:0000914!1.12e-18!83;UBERON:0002329!1.12e-18!83;UBERON:0003077!1.12e-18!83;UBERON:0003059!1.12e-18!83;UBERON:0007282!1.12e-18!83;UBERON:0009618!1.12e-18!83;UBERON:0007285!1.12e-18!83;UBERON:0000480!2.84e-18!626;UBERON:0000467!5.62e-18!625;UBERON:0000486!1.29e-17!82;UBERON:0002100!1.78e-17!216;UBERON:0004290!3.72e-16!70;UBERON:0003102!1.58e-15!95;UBERON:0000481!4.02e-15!347;UBERON:0002385!9.86e-15!63;UBERON:0001015!9.86e-15!63;UBERON:0000383!9.86e-15!63;UBERON:0001134!2.08e-14!61;UBERON:0002036!2.08e-14!61;UBERON:0003082!2.08e-14!61;UBERON:0000483!3.67e-14!309;UBERON:0000119!1.14e-13!312;UBERON:0003104!3.56e-13!238;UBERON:0009142!3.56e-13!238;UBERON:0002050!2.92e-11!605;UBERON:0005423!2.92e-11!605;UBERON:0000923!4.04e-11!604;UBERON:0005291!4.04e-11!604;UBERON:0006598!4.04e-11!604;UBERON:0002532!4.04e-11!604;UBERON:0000922!6.69e-11!612;UBERON:0000490!2.29e-10!138;UBERON:0004111!4.59e-10!241;UBERON:0002199!6.15e-10!45;UBERON:0002416!6.15e-10!45;UBERON:0000477!1.62e-09!286;UBERON:0001637!1.72e-09!42;UBERON:0003509!1.72e-09!42;UBERON:0004572!1.72e-09!42;UBERON:0003914!1.91e-09!118;UBERON:0004872!2.27e-09!84;UBERON:0000926!2.33e-09!448;UBERON:0004120!2.33e-09!448;UBERON:0006603!2.33e-09!448;UBERON:0000062!2.93e-09!511;UBERON:0001981!3.19e-09!60;UBERON:0007500!3.19e-09!60;UBERON:0004537!3.19e-09!60;UBERON:0006965!3.19e-09!60;UBERON:0000055!8.98e-09!69;UBERON:0004573!9.47e-09!33;UBERON:0004571!9.47e-09!33;UBERON:0002097!1.19e-08!40;UBERON:0002049!4.08e-08!79;UBERON:0007798!4.08e-08!79;UBERON:0004923!6.83e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.27e-08;31!UBERON:0001015;2.27e-08;31!UBERON:0000383;2.27e-08;31!UBERON:0004573;5.51e-08;33!UBERON:0004571;5.51e-08;33!UBERON:0002199;1.91e-07;46!UBERON:0002416;1.91e-07;46!UBERON:0002097;3.14e-07;41!UBERON:0001637;5.84e-07;42!UBERON:0003509;5.84e-07;42!UBERON:0004572;5.84e-07;42!UBERON:0003102;8.80e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,8.05e-18,83;UBERON:0007503,5.58e-17,78;UBERON:0003104,7.96e-17,160;UBERON:0009142,7.96e-17,160;UBERON:0003102,1.20e-16,99;UBERON:0005256,1.50e-16,122;UBERON:0002329,2.44e-16,71;UBERON:0003059,2.44e-16,71;UBERON:0007282,2.44e-16,71;UBERON:0004290,2.44e-16,71;UBERON:0009618,2.44e-16,71;UBERON:0007524,2.69e-16,73;UBERON:0003077,4.57e-16,72;UBERON:0007285,4.57e-16,72;UBERON:0002385,6.71e-15,64;UBERON:0001015,6.71e-15,64;UBERON:0000383,6.71e-15,64;UBERON:0001134,1.43e-14,62;UBERON:0002036,1.43e-14,62;UBERON:0003082,1.43e-14,62;UBERON:0000483,1.83e-14,306;UBERON:0002100,2.54e-14,199;UBERON:0000119,5.85e-14,309;UBERON:0000490,3.26e-12,148;UBERON:0005423,1.43e-10,581;UBERON:0002199,2.32e-10,46;UBERON:0002416,2.32e-10,46;UBERON:0002050,2.73e-10,564;UBERON:0004111,5.77e-10,240;UBERON:0000923,1.27e-09,560;UBERON:0010316,1.27e-09,560;UBERON:0005291,1.27e-09,560;UBERON:0006598,1.27e-09,560;UBERON:0010317,1.27e-09,560;UBERON:0002532,1.27e-09,560;UBERON:0001637,1.47e-09,42;UBERON:0003509,1.47e-09,42;UBERON:0004572,1.47e-09,42;UBERON:0000922,1.74e-09,592;UBERON:0003914,2.12e-09,117;UBERON:0004872,4.44e-09,83;UBERON:0002097,4.67e-09,41;UBERON:0004923,5.40e-09,66;UBERON:0007500,7.54e-09,59;UBERON:0001981,7.54e-09,59;UBERON:0004537,7.54e-09,59;UBERON:0006965,7.54e-09,59;UBERON:0004573,8.18e-09,33;UBERON:0004571,8.18e-09,33;UBERON:0000055,2.01e-08,68;UBERON:0000926,6.68e-08,315;UBERON:0004120,6.68e-08,315;UBERON:0006603,6.68e-08,315;UBERON:0002049,8.61e-08,78;UBERON:0007798,8.61e-08,78 | |||
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| |||
|short_description=p1@GAS6 | |||
}} |
Latest revision as of 16:53, 16 September 2015
Short description: | p1@GAS6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GAS6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000476291_5end |
EntrezGene: | GAS6 |
HGNC: | 4168 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.18e-17 | 76 |
muscle precursor cell | 2.44e-14 | 58 |
myoblast | 2.44e-14 | 58 |
multi-potent skeletal muscle stem cell | 2.44e-14 | 58 |
smooth muscle cell | 6.73e-14 | 43 |
smooth muscle myoblast | 6.73e-14 | 43 |
mesodermal cell | 1.50e-13 | 121 |
muscle cell | 4.66e-13 | 55 |
embryonic cell | 3.19e-11 | 250 |
vascular associated smooth muscle cell | 5.97e-11 | 32 |
electrically responsive cell | 2.63e-10 | 61 |
electrically active cell | 2.63e-10 | 61 |
skin fibroblast | 1.68e-08 | 23 |