FFCP PHASE1:Hg19::chr1:23886132..23886156,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3399 | |EntrezGene=3399 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5362 | |HGNC=5362 | ||
|TSSclassifier=strong | |||
|UniProt=Q02535 | |UniProt=Q02535 | ||
|association_with_transcript=128bp_to_ENST00000374561,NM_002167_5end | |association_with_transcript=128bp_to_ENST00000374561,NM_002167_5end | ||
|cluster_id=chr1:23886132..23886156,- | |||
|description=CAGE_peak_2_at_ID3_5end | |description=CAGE_peak_2_at_ID3_5end | ||
|id=chr1:23886132..23886156,- | |id=chr1:23886132..23886156,- | ||
|ontology_enrichment_celltype=CL:0000222!5.43e-16!119;CL:0000213!5.82e-14!57;CL:0000215!5.82e-14!57;CL:0000115!1.77e-10!35;CL:0002078!1.12e-09!44;CL:0002139!3.35e-09!24;CL:0000071!3.89e-09!18;CL:0002546!3.89e-09!18;CL:0002321!3.41e-08!248;CL:0000220!4.72e-08!246;CL:0000055!7.01e-07!180 | |ontology_enrichment_celltype=CL:0000222!5.43e-16!119;CL:0000213!5.82e-14!57;CL:0000215!5.82e-14!57;CL:0000115!1.77e-10!35;CL:0002078!1.12e-09!44;CL:0002139!3.35e-09!24;CL:0000071!3.89e-09!18;CL:0002546!3.89e-09!18;CL:0002321!3.41e-08!248;CL:0000220!4.72e-08!246;CL:0000055!7.01e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0002188;2.81e-09;5!CL:0000115;4.65e-08;36!CL:0000213;1.33e-07;58!CL:0000215;1.33e-07;58!CL:0002494;3.22e-07;16!CL:0000071;8.93e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,1.85e-11,58;CL:0000215,1.85e-11,58;CL:0000115,5.47e-10,36;CL:0002188,4.63e-09,5;CL:0000222,5.37e-09,121;CL:0002078,6.06e-08,45;CL:0002494,4.12e-07,16;CL:0000071,7.96e-07,18;CL:0002546,7.96e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;8.93e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.46e-13!84;UBERON:0001981!9.07e-12!60;UBERON:0007500!9.07e-12!60;UBERON:0004537!9.07e-12!60;UBERON:0006965!9.07e-12!60;UBERON:0003914!1.50e-11!118;UBERON:0000055!7.39e-11!69;UBERON:0002049!3.96e-10!79;UBERON:0007798!3.96e-10!79;UBERON:0001986!3.89e-09!18;UBERON:0004638!3.89e-09!18;UBERON:0004852!3.89e-09!18;UBERON:0000477!4.48e-09!286;UBERON:0001009!7.28e-09!113;UBERON:0000490!1.28e-08!138;UBERON:0000487!1.63e-08!22;UBERON:0004535!1.68e-08!110;UBERON:0006914!2.62e-08!25;UBERON:0000025!9.50e-08!194;UBERON:0000119!6.30e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.91e-12;9!UBERON:0001557;6.91e-12;9!UBERON:0000487;9.66e-08;22!UBERON:0004638;8.93e-07;18!UBERON:0001986;8.93e-07;18!UBERON:0004852;8.93e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.40e-12,9;UBERON:0003914,1.62e-08,117;UBERON:0004872,3.04e-08,83;UBERON:0000487,7.47e-08,22;UBERON:0001557,1.14e-07,19;UBERON:0004638,7.96e-07,18;UBERON:0001986,7.96e-07,18;UBERON:0004852,7.96e-07,18 | |||
|phase1_expression=1.99846217197612,1.49870366723688,2.11431606143957,2.00146596706261,3.12872766099101,4.36169262050184,0,0,0.261185628199839,3.19454117451962,8.37361401566913,0,0.263766978228454,0.618831764800233,0.331397375727916,0.672325146451775,0,0,0,0.861847406537515,1.22400414746552,1.88072832886853,0.572471974262113,2.18999080116615,1.12988375635323,0.0764134057479513,0.246301768349837,0.0787107813136792,0.786728553697808,0,0.77408061658038,0,0.30120591877825,0,0.46480320348181,0,0,0,0,0,0.447830948479849,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0,0,0,0.376484679085209,0,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,1.12101712596307,0,0.196709770113833,0,0.822405995998037,0,0.32592226663359,0,0,0,0.294605907474837,0,0,0,0,0,0,0,1.03800594213442,0.535081656179426,2.09071047609954,0,0.766440987203842,0,0,0,0,0,0.301150238155546,0.255973222308837,0,0,0,0,0,0.724122019413995,0,2.68280343881454,2.9408389224012,1.44575660953827,1.50401373190767,1.44846518960824,1.5905718941022,1.45990461090791,0.756278537312543,0.443458794925128,0.087834785693126,0.261958150995425,0,0,0,0,0.132957960518865,0,0,1.48583000531826,0.39752481473341,0.860234595106124,1.04142150482278,1.69592382577203,1.25849830862972,0.825354125820202,0.835979866147242,0.258416759169329,0.35576626268671,0.66944122552934,1.61131726843659,6.0821768457481,1.95249646038536,0.735326160691737,0.81014194788176,0.892997282840798,0.898117490504679,1.23872628531654,3.06633274931766,2.84779697870439,1.28241220751285,0,0,0,1.98788780678127,0.506522046658319,0,0,0.709336764396714,0,4.2699598291882,2.22000793575444,0.622422070799533,2.42479209725439,1.47115712802113,0.151357427644931,0,0.468642863667593,0,0,0,0.23486899728753,0,0,0.204154171254893,0,0,0,0.494533858557114,0,0,0,0,0,0.438977620880838,0.612975591598039,0,0.453728732640084,0.89694817844431,0.213557388818567,0.211931901159562,1.20036438433761,0.103052529238439,0.515281080091258,0,0.337552664482532,0.389748020644795,0.252433774244115,0.368199594569197,0.161646056818812,0.710019185033229,0.403008392910561,0.508681776931463,0,0,0,0.121973706129595,0.662648841607426,0.116193942869518,0.310983165046111,0,0.72995471815166,0,0,1.38134921352481,0,0,1.41968160047813,1.18009283054671,1.68707720918437,1.65440959098591,2.61455332910887,1.66089433377768,1.07865046528132,1.76599318612811,1.53898862778556,0.738155454624648,7.01208869017229,0,1.47008711385542,0,0,0.590789906681404,1.7658523976586,0.122988438543114,0.343135620597051,0,0,0,0,0.325808305310325,0,1.44331342025273,0.463721619900307,0.352226082707465,1.15493158208859,0,1.52203321787679,0,0,0.246217006087397,0,0.445893486866185,0,0.335964256397719,0,0.179117045405697,0,0,0,0,0,0,0,0,0,1.17217447210047,1.71072446022705,0.102827492703324,0,0,0,1.30788020649984,0.7333828582095,0.646358578788889,3.57656445851882,0,0,0,0.514414748524284,0,1.3321108950805,0.285955987316295,0,2.46972101034231,0,0.355391948742546,0.791951872933429,0.904318131178758,0,0.499864955910285,0,0,0,0.239624855491583,2.29723871668228,0,0.289562613335158,0.821905290201534,1.61154866915906,0,0,0,0.256686072559497,0.76228387266739,0,3.86644406388848,1.34013012267479,0.637938751653163,0,0,0,0.613457458595699,0,0.813795071099207,0.207970861530807,0,0.630809660135739,0,0,2.27407504055985,0,0,0.553107505625109,0,0.391602314925481,0,0.413536052245775,0.215714200818617,0,0,0,0,2.97729369382532,1.99500565274481,0,1.40953064181271,0,0.965123526861645,4.45254199334973,0,0,0,0,0.464841513839837,0,1.00253235151642,0,0.229628896329213,0,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,3.4120015221269,1.19065593693561,2.15915916102139,6.16909010761157,0,0.501689773854853,0,0,0.223874754722178,0,0,0.256450125116389,2.95213181129735,1.30151357865721,0.721287081534056,0.54941678891006,0.577566499444116,0.574265537996172,0.650060246036521,1.6068392984416,0.193341436584244,0.770243085573222,0.767518373630648,0.137836572484531,0.537101224341368,1.30515024522806,0.340906509664404,0.445160178233687,0,0,0,0,0.929691098594572,0,0.6970372701606,0.616067160352178,1.59691809095107,0.869932992075073,2.40921484835096,1.14499909393593,0.744316738719335,0,0,0,0.42793898803392,0.318203247925937,2.35484592059769,0.179872457583315,0,0.117812402345686,0.808729926293264,3.17020642346017,0.421258456238981,0.48763373908959,0.974853958525138,0,0.136499911407986,0.282810863907425,0,2.75682671773062,1.32687795048244,0.438450885253763,0.578775534266688,0,0.811641507850816,0.30982349809975,0,0.286822704408103,0.785992328104969,1.07001315444375,0,0.633322905892992,0.987884678879706,0.379473173765715,0,0,0,0,0.847294206991012,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,2.02965735142199,1.92495971052672,2.94048259177238,0.185803175125719,0.432807638929335,0,0.797131363644112,0,0,0,0,0,0,0,2.50634477090067,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.222886768554957,0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| ||
|short_description=p2@ID3 | |short_description=p2@ID3 | ||
}} | }} |
Latest revision as of 16:12, 16 September 2015
Short description: | p2@ID3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ID3_5end |
Coexpression cluster: | NA |
Association with transcript: | 128bp_to_ENST00000374561, NM_002167_5end |
EntrezGene: | ID3 |
HGNC: | 5362 |
UniProt: | Q02535 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 1.85e-11 | 58 |
barrier cell | 1.85e-11 | 58 |
endothelial cell | 5.47e-10 | 36 |
glomerular endothelial cell | 4.63e-09 | 5 |
mesodermal cell | 5.37e-09 | 121 |
meso-epithelial cell | 6.06e-08 | 45 |
cardiocyte | 4.12e-07 | 16 |
blood vessel endothelial cell | 7.96e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.96e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.40e-12 | 9 |
epithelial tube | 1.62e-08 | 117 |
splanchnic layer of lateral plate mesoderm | 3.04e-08 | 83 |
simple squamous epithelium | 7.47e-08 | 22 |
upper respiratory tract | 1.14e-07 | 19 |
blood vessel endothelium | 7.96e-07 | 18 |
endothelium | 7.96e-07 | 18 |
cardiovascular system endothelium | 7.96e-07 | 18 |