FFCP PHASE1:Hg19::chr10:119303078..119303169,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2018 | |EntrezGene=2018 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3341 | |HGNC=3341 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000442245_5end | |association_with_transcript=0bp_to_ENST00000442245_5end | ||
|cluster_id=chr10:119303078..119303169,+ | |||
|coexpression_cluster_id=C1298 | |||
|description=CAGE_peak_2_at_EMX2_5end | |description=CAGE_peak_2_at_EMX2_5end | ||
|id=chr10:119303078..119303169,+ | |id=chr10:119303078..119303169,+ | ||
|ontology_enrichment_celltype=CL:0002620!3.75e-14!23;CL:0000057!5.79e-10!75;CL:0002334!7.15e-07!12;CL:0000136!9.26e-07!15 | |ontology_enrichment_celltype=CL:0002620!3.75e-14!23;CL:0000057!5.79e-10!75;CL:0002334!7.15e-07!12;CL:0000136!9.26e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.66e-18;23!CL:1000507;1.91e-08;10!CL:1000494;1.91e-08;10!CL:0000136;5.38e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.53e-18,23;CL:0000057,2.19e-09,76;CL:0000136,8.94e-09,15;CL:1000507,2.31e-08,10;CL:1000494,2.31e-08,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;3.95e-07;5!DOID:450;3.95e-07;5!DOID:66;3.95e-07;5!DOID:423;3.95e-07;5!DOID:0080000;3.95e-07;5!DOID:11722;3.95e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.88e-07,5;DOID:450,3.88e-07,5;DOID:66,3.88e-07,5;DOID:423,3.88e-07,5;DOID:0080000,3.88e-07,5;DOID:11722,3.88e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.82e-20!115;UBERON:0005743!1.15e-19!86;UBERON:0001017!1.40e-19!82;UBERON:0002616!1.50e-19!59;UBERON:0001049!4.84e-19!57;UBERON:0005068!4.84e-19!57;UBERON:0006241!4.84e-19!57;UBERON:0007135!4.84e-19!57;UBERON:0003080!1.68e-18!42;UBERON:0002780!7.56e-18!41;UBERON:0001890!7.56e-18!41;UBERON:0006240!7.56e-18!41;UBERON:0000955!1.34e-17!69;UBERON:0006238!1.34e-17!69;UBERON:0000475!1.65e-17!365;UBERON:0000073!1.96e-17!94;UBERON:0001016!1.96e-17!94;UBERON:0002199!3.00e-16!45;UBERON:0002416!3.00e-16!45;UBERON:0003075!1.51e-15!86;UBERON:0007284!1.51e-15!86;UBERON:0002020!2.30e-15!34;UBERON:0003528!2.30e-15!34;UBERON:0002346!2.37e-15!90;UBERON:0001893!3.32e-15!34;UBERON:0002791!7.31e-15!33;UBERON:0003056!1.26e-14!61;UBERON:0001869!3.48e-14!32;UBERON:0002097!1.02e-13!40;UBERON:0000924!4.70e-11!173;UBERON:0006601!4.70e-11!173;UBERON:0004121!5.36e-11!169;UBERON:0000956!9.92e-11!25;UBERON:0000203!9.92e-11!25;UBERON:0000033!5.26e-10!123;UBERON:0000153!9.61e-10!129;UBERON:0007811!9.61e-10!129;UBERON:0000468!5.82e-09!659;UBERON:0002619!5.99e-09!22;UBERON:0003102!6.17e-08!95;UBERON:0001950!7.51e-08!20;UBERON:0002113!1.30e-07!27;UBERON:0003918!1.30e-07!27;UBERON:0005095!1.30e-07!27;UBERON:0007687!1.30e-07!27;UBERON:0000489!1.68e-07!32;UBERON:0001013!2.02e-07!14;UBERON:0000467!5.85e-07!625;UBERON:0000480!7.60e-07!626;UBERON:0001008!8.51e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.95e-17;34!UBERON:0003528;4.79e-17;34!UBERON:0002020;4.79e-17;34!UBERON:0002791;6.94e-17;32!UBERON:0001869;9.02e-17;32!UBERON:0002780;3.71e-16;41!UBERON:0001890;3.71e-16;41!UBERON:0000956;5.18e-14;25!UBERON:0000203;5.18e-14;25!UBERON:0000073;8.96e-13;53!UBERON:0002616;8.96e-13;53!UBERON:0002199;5.40e-12;46!UBERON:0002416;5.40e-12;46!UBERON:0002619;1.00e-11;22!UBERON:0002097;1.30e-10;41!UBERON:0001950;2.90e-10;20!UBERON:0001013;1.60e-09;14!UBERON:0003102;1.75e-09;50!UBERON:0001017;3.98e-09;75!UBERON:0004211;1.91e-08;10!UBERON:0009773;1.91e-08;10!UBERON:0001231;1.91e-08;10!UBERON:0004810;1.91e-08;10!UBERON:0000955;2.77e-08;68!UBERON:0002420;8.46e-08;9!UBERON:0007245;8.46e-08;9!UBERON:0010009;8.46e-08;9!UBERON:0010011;8.46e-08;9!UBERON:0000454;8.46e-08;9!UBERON:0001016;1.07e-07;83!UBERON:0000125;1.55e-07;9!UBERON:0002308;1.55e-07;9!UBERON:0000489;7.04e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.52e-22,81;UBERON:0002780,2.70e-22,41;UBERON:0001890,2.70e-22,41;UBERON:0003080,2.70e-22,41;UBERON:0006240,2.70e-22,41;UBERON:0001049,1.81e-21,56;UBERON:0005068,1.81e-21,56;UBERON:0006241,1.81e-21,56;UBERON:0007135,1.81e-21,56;UBERON:0000073,2.45e-21,53;UBERON:0002616,2.45e-21,53;UBERON:0001016,4.17e-20,89;UBERON:0003528,4.68e-20,34;UBERON:0002020,4.68e-20,34;UBERON:0001893,7.62e-20,34;UBERON:0000955,2.61e-19,68;UBERON:0006238,2.61e-19,68;UBERON:0002791,1.23e-18,32;UBERON:0001869,1.67e-18,32;UBERON:0007023,1.65e-17,114;UBERON:0002199,4.67e-17,46;UBERON:0002416,4.67e-17,46;UBERON:0003056,9.72e-17,61;UBERON:0003075,1.01e-15,82;UBERON:0007284,1.01e-15,82;UBERON:0002346,2.51e-15,86;UBERON:0000956,5.81e-14,25;UBERON:0000203,5.81e-14,25;UBERON:0002097,6.38e-14,41;UBERON:0010371,3.98e-13,104;UBERON:0002619,1.29e-11,22;UBERON:0010314,7.49e-11,132;UBERON:0004121,1.49e-10,171;UBERON:0000924,1.49e-10,171;UBERON:0006601,1.49e-10,171;UBERON:0001950,3.61e-10,20;UBERON:0001013,1.87e-09,14;UBERON:0000489,2.14e-08,31;UBERON:0004810,2.31e-08,10;UBERON:0002113,3.56e-08,26;UBERON:0003918,3.56e-08,26;UBERON:0011143,3.56e-08,26;UBERON:0005095,3.56e-08,26;UBERON:0007687,3.56e-08,26;UBERON:0002420,6.94e-08,9;UBERON:0007245,6.94e-08,9;UBERON:0010009,6.94e-08,9;UBERON:0010011,6.94e-08,9;UBERON:0000454,6.94e-08,9;UBERON:0000125,1.12e-07,9;UBERON:0002308,1.12e-07,9;UBERON:0000479,4.97e-07,773 | |||
|phase1_expression=7.44881355009282,2.35510576280081,1.40954404095971,6.00439790118782,0,6.10636966870258,5.06599756336621,3.15859936713415,2.08948502559871,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,6.29719171688325,5.88560027813402,3.64073654824928,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,2.00535164254356,2.31754430337318,4.7717156823066,0,0,0,0,2.94702919869853,0,0.370784442784429,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0.835979866147242,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47274756525787,0,0,0,0.709336764396714,0,0,0.24666754841716,0,0,0.163461903113459,1.66493170409425,0.576175924479999,2.81185718200556,1.87296046098192,1.71141546463335,3.28787097213962,4.3450764498193,4.85618833104395,4.9157782345787,0,0.368502951935304,0,0,0,0,0,0.505008341862199,0.625592599359821,0,0,0,0,0.113432183160021,16.6832361190642,32.0336083227851,26.4914876449452,12.9039171316293,26.8967101312326,7.9868567414145,11.353128236227,9.95780360223471,27.2823614451356,14.1362913576704,33.9664125990085,15.1947293409683,14.2003837006646,24.5835119675442,6.61286310010902,0,0,0,0.243947412259191,0,0,0.725627385107593,0.252320850875628,0,1.56449532329816,3.21620469096443,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,2.23038153388083,3.29250856225877,0,1.70899253099772,0,7.81939932744779,0,0,0,0.70445216541493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.50496973370552,0.063497894292169,0,0,0,0,0,0,0.672786506072164,0.43596006883328,0.80672114403045,0.387815147273333,0,1.690605505112,9.83971031364021,5.2003718455683,0.257207374262142,0,0.266422179016099,0,0,0,1.30294473717494,0,0.791951872933429,0.301439377059586,0,0,0,0,0,0,0,0,3.04040744001916,0,0.537182889719687,0,0,0,0,15.2456774533478,10.4111883086097,2.31986643833309,4.35542289869307,1.27587750330633,0,0,0,0,0,0,0,0,0,0,1.20378439891088,0,2.0694614258501,0,1.29058417979192,1.56390506042549,0.391602314925481,0,0,0,0,0,0,0,5.70647957983187,5.83155498494637,7.29716245525991,0.896974044789907,7.67560873600055,0.160853921143607,1.48418066444991,8.3273234653434,2.84098760501003,3.53146770859379,0.519254429183621,8.94819914141686,0.241718899183244,0.200506470303285,0,0,0,0.131124414959424,3.15839729035188,4.38987421495164,1.56869953835371,4.38417673959782,5.17202981575091,0,0.170093705276516,0.215915916102139,1.54227252690289,2.43851793789468,4.01351819083883,5.3524017339458,4.15538004464362,3.35812132083267,0,0,0,0.328014645699706,0.325378394664303,0.412164046590889,0,0,3.44559322797703,0.650060246036521,0,3.86682873168488,2.00263202249038,1.5350367472613,0.964856007391714,3.43744783578476,1.74020032697074,2.21589231281862,3.11612124763581,0,0,0,0,0,0,0,0.924100740528266,0,0,0,0.286249773483982,1.48863347743867,2.21465597303108,0,0,0,0,0,0.359744915166629,1.09814811894422,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0.578775534266688,0,0.202910376962704,0,0.845086807596724,1.86434757865267,0.196498082026242,0.7133421029625,4.25713276884717,11.1887046707762,12.1839110395164,3.03578539012572,3.84928192269481,0,0,0,0.753150406214233,0.43050537267123,1.68471475667626,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07667176470977,0,0,0,0,0.296964680832639,0,4.97073823883149,5.06409899077846,0,0,0,0.19924798825107,0.276283915531148,0,0,0,13.6857418571195,0,0,0,2.76201535783414,0,0,0.969332746095218,3.24688343566479,3.99227596002388,0,0,5.79999660347835,0,0,0,1.03423011972439,0.583209226766509,2.43074992906609,14.1718621730214,4.82385754501632,0,0.774054819518572,0.591095237907095,4.38770794307945,0,0.83654246567162,8.61842895242527,0,0,0,0.108647371922008,0,5.12946523050429,0,0,0,0,0,0,0,0,0,0,0,2.26164914294305,2.59666367690509,0,0.0884575645033392,0,0,0,0,4.44847477672468,0.802577647298789,3.74823113160543,0,0.978323094660449,0,12.2321164883311,0,2.44858209304392,4.7389934721366,0.751617097072463,1.55532287095871,0,0,0.627865836814451,0,0,0,5.0332324117188,0,0,12.4055934451841,1.71986032471617,0,0,0,0.484945082442097,0,4.06765333404958,0,0,2.40581024632339,1.17330829640882,0,1.28071796843612,0.39961921916426,0,0.343609788497747,0,0,0,0,1.49494626680975,1.04602846312333,0,0,3.60252173225874,3.01191833562385,0,0,0,0.558564802544508,0.687481272035051,0,0.399358000997982,0,0.89268582976749,0.201550417460179,0,0,0,0,0,0,0,3.18091875923721,6.81017030557878,0,0,0,0,0,2.61223093629506,0.670869375198532,13.2393588262653,9.38937127616466,0,0,0,2.85878130549347,0,18.307334711142,10.8599920350743,10.3706578944152,16.002780645361,0,0,0,0,0,0,5.30060121082357,2.90911723833918,0,0,0,0,0,0.992332043623902,0,0,0,3.26410682021684,1.5041393641362,0,4.26234419922746,0.157054096250234,0,3.05065662254908,4.50687350543399,3.44045517414043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| ||
|short_description=p2@EMX2 | |short_description=p2@EMX2 | ||
}} | }} |
Latest revision as of 15:54, 16 September 2015
Short description: | p2@EMX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EMX2_5end |
Coexpression cluster: | C1298_ductus_seminal_Fibroblast_kidney_uterus_epididymis_mesenchymal |
Association with transcript: | 0bp_to_ENST00000442245_5end |
EntrezGene: | EMX2 |
HGNC: | 3341 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.53e-18 | 23 |
fibroblast | 2.19e-09 | 76 |
fat cell | 8.94e-09 | 15 |
kidney tubule cell | 2.31e-08 | 10 |
nephron tubule epithelial cell | 2.31e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.88e-07 | 5 |
myotonic disease | 3.88e-07 | 5 |
muscle tissue disease | 3.88e-07 | 5 |
myopathy | 3.88e-07 | 5 |
muscular disease | 3.88e-07 | 5 |
myotonic dystrophy | 3.88e-07 | 5 |