FFCP PHASE1:Hg19::chr10:119302232..119302265,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2018 | |EntrezGene=2018 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3341 | |HGNC=3341 | ||
|TSSclassifier=strong | |||
|UniProt=G3V305,Q04743 | |UniProt=G3V305,Q04743 | ||
|association_with_transcript=276bp_to_ENST00000553456,NM_001165924,NM_004098,uc001ldh.3,uc001ldi.3_5end | |association_with_transcript=276bp_to_ENST00000553456,NM_001165924,NM_004098,uc001ldh.3,uc001ldi.3_5end | ||
|cluster_id=chr10:119302232..119302265,+ | |||
|coexpression_cluster_id=C718 | |coexpression_cluster_id=C718 | ||
|description=CAGE_peak_1_at_EMX2_5end | |description=CAGE_peak_1_at_EMX2_5end | ||
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|ontology_enrichment_celltype=CL:0002620!2.65e-10!23 | |ontology_enrichment_celltype=CL:0002620!2.65e-10!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.92e-10;23!CL:1000507;6.63e-08;10!CL:1000494;6.63e-08;10 | |ontology_enrichment_celltype_v019=CL:0002620;1.92e-10;23!CL:1000507;6.63e-08;10!CL:1000494;6.63e-08;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.10e-10,23;CL:1000507,6.99e-08,10;CL:1000494,6.99e-08,10 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.19e-09;82!UBERON:0005795;2.43e-07;10 | |ontology_enrichment_development_v019=UBERON:0006601;9.19e-09;82!UBERON:0005795;2.43e-07;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;5.50e-07;5!DOID:450;5.50e-07;5!DOID:66;5.50e-07;5!DOID:423;5.50e-07;5!DOID:0080000;5.50e-07;5!DOID:11722;5.50e-07;5 | |ontology_enrichment_disease_v019=DOID:17;5.50e-07;5!DOID:450;5.50e-07;5!DOID:66;5.50e-07;5!DOID:423;5.50e-07;5!DOID:0080000;5.50e-07;5!DOID:11722;5.50e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,5.81e-07,5;DOID:450,5.81e-07,5;DOID:66,5.81e-07,5;DOID:423,5.81e-07,5;DOID:0080000,5.81e-07,5;DOID:11722,5.81e-07,5 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;8.54e-37;34!UBERON:0001869;1.94e-36;32!UBERON:0002791;4.36e-36;32!UBERON:0003528;4.45e-36;34!UBERON:0002020;4.45e-36;34!UBERON:0000956;3.56e-32;25!UBERON:0000203;3.56e-32;25!UBERON:0002780;1.72e-30;41!UBERON:0001890;1.72e-30;41!UBERON:0002619;1.84e-28;22!UBERON:0001950;1.34e-25;20!UBERON:0000073;1.56e-25;53!UBERON:0002616;1.56e-25;53!UBERON:0001017;1.48e-17;75!UBERON:0000955;3.62e-17;68!UBERON:0001016;1.76e-13;83!UBERON:0002420;7.51e-12;9!UBERON:0007245;7.51e-12;9!UBERON:0010009;7.51e-12;9!UBERON:0010011;7.51e-12;9!UBERON:0000454;7.51e-12;9!UBERON:0000125;5.39e-11;9!UBERON:0002308;5.39e-11;9!UBERON:0007023;1.40e-10;114!UBERON:0000200;1.88e-09;6!UBERON:0009663;4.12e-09;7!UBERON:0000349;1.92e-08;5!UBERON:0002021;4.30e-08;5!UBERON:0001871;5.48e-08;6!UBERON:0004211;6.63e-08;10!UBERON:0009773;6.63e-08;10!UBERON:0001231;6.63e-08;10!UBERON:0004810;6.63e-08;10!UBERON:0001872;7.06e-08;5!UBERON:0002298;7.54e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0001893;8.54e-37;34!UBERON:0001869;1.94e-36;32!UBERON:0002791;4.36e-36;32!UBERON:0003528;4.45e-36;34!UBERON:0002020;4.45e-36;34!UBERON:0000956;3.56e-32;25!UBERON:0000203;3.56e-32;25!UBERON:0002780;1.72e-30;41!UBERON:0001890;1.72e-30;41!UBERON:0002619;1.84e-28;22!UBERON:0001950;1.34e-25;20!UBERON:0000073;1.56e-25;53!UBERON:0002616;1.56e-25;53!UBERON:0001017;1.48e-17;75!UBERON:0000955;3.62e-17;68!UBERON:0001016;1.76e-13;83!UBERON:0002420;7.51e-12;9!UBERON:0007245;7.51e-12;9!UBERON:0010009;7.51e-12;9!UBERON:0010011;7.51e-12;9!UBERON:0000454;7.51e-12;9!UBERON:0000125;5.39e-11;9!UBERON:0002308;5.39e-11;9!UBERON:0007023;1.40e-10;114!UBERON:0000200;1.88e-09;6!UBERON:0009663;4.12e-09;7!UBERON:0000349;1.92e-08;5!UBERON:0002021;4.30e-08;5!UBERON:0001871;5.48e-08;6!UBERON:0004211;6.63e-08;10!UBERON:0009773;6.63e-08;10!UBERON:0001231;6.63e-08;10!UBERON:0004810;6.63e-08;10!UBERON:0001872;7.06e-08;5!UBERON:0002298;7.54e-07;6 | ||
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| ||
|short_description=p1@EMX2 | |short_description=p1@EMX2 | ||
}} | }} |
Latest revision as of 15:50, 16 September 2015
Short description: | p1@EMX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EMX2_5end |
Coexpression cluster: | C718_epididymis_seminal_uterus_cervix_ductus_peripheral_colon |
Association with transcript: | 276bp_to_ENST00000553456, NM_001165924, NM_004098, uc001ldh.3, uc001ldi.3_5end |
EntrezGene: | EMX2 |
HGNC: | 3341 |
UniProt: | G3V305Q04743 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.10e-10 | 23 |
kidney tubule cell | 6.99e-08 | 10 |
nephron tubule epithelial cell | 6.99e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.81e-07 | 5 |
myotonic disease | 5.81e-07 | 5 |
muscle tissue disease | 5.81e-07 | 5 |
myopathy | 5.81e-07 | 5 |
muscular disease | 5.81e-07 | 5 |
myotonic dystrophy | 5.81e-07 | 5 |