FFCP PHASE1:Hg19::chr20:45947733..45947837,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:45947733..45947837,-
|short_description=p3@ZMYND8
|description=CAGE_peak_3_at_ZMYND8_5end
|association_with_transcript=0bp_to_ENST00000468376,uc002xtg.2_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23613 | |EntrezGene=23613 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9397 | |HGNC=9397 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JV90 | |UniProt=Q5JV90 | ||
|association_with_transcript=0bp_to_ENST00000468376,uc002xtg.2_5end | |||
|cluster_id=chr20:45947733..45947837,- | |||
|description=CAGE_peak_3_at_ZMYND8_5end | |||
|id=chr20:45947733..45947837,- | |||
|ontology_enrichment_celltype=CL:0000066!1.12e-11!254;CL:0000057!3.29e-08!75;CL:0000220!1.16e-07!246;CL:0002368!1.17e-07!13;CL:0002321!1.85e-07!248;CL:0002620!8.62e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002368;6.30e-08;13!CL:0002620;4.86e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.85e-11,253;CL:0000057,1.20e-08,76;CL:0002368,8.08e-08,13;CL:0002620,5.80e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.45e-23!659;UBERON:0000467!7.06e-22!625;UBERON:0000480!1.73e-21!626;UBERON:0002050!2.40e-13!605;UBERON:0005423!2.40e-13!605;UBERON:0000923!3.45e-13!604;UBERON:0005291!3.45e-13!604;UBERON:0006598!3.45e-13!604;UBERON:0002532!3.45e-13!604;UBERON:0002100!3.56e-13!216;UBERON:0000922!6.75e-13!612;UBERON:0000926!1.13e-12!448;UBERON:0004120!1.13e-12!448;UBERON:0006603!1.13e-12!448;UBERON:0003102!2.43e-12!95;UBERON:0000062!7.75e-12!511;UBERON:0003104!8.22e-12!238;UBERON:0009142!8.22e-12!238;UBERON:0000475!2.41e-11!365;UBERON:0004119!4.28e-11!169;UBERON:0000925!4.28e-11!169;UBERON:0006595!4.28e-11!169;UBERON:0000464!9.08e-11!104;UBERON:0000481!1.29e-09!347;UBERON:0004872!1.39e-09!84;UBERON:0000466!1.40e-08!126;UBERON:0000486!1.56e-08!82;UBERON:0002553!4.15e-08!70;UBERON:0004923!5.48e-08!57;UBERON:0000119!5.78e-08!312;UBERON:0003914!6.48e-08!118;UBERON:0001007!7.67e-08!155;UBERON:0001555!7.67e-08!155;UBERON:0007026!7.67e-08!155;UBERON:0000483!2.21e-07!309;UBERON:0000914!2.57e-07!83;UBERON:0002329!2.57e-07!83;UBERON:0003077!2.57e-07!83;UBERON:0003059!2.57e-07!83;UBERON:0007282!2.57e-07!83;UBERON:0009618!2.57e-07!83;UBERON:0007285!2.57e-07!83;UBERON:0000055!2.69e-07!69;UBERON:0005256!2.71e-07!143;UBERON:0002199!3.40e-07!45;UBERON:0002416!3.40e-07!45;UBERON:0000477!3.93e-07!286;UBERON:0002049!4.52e-07!79;UBERON:0007798!4.52e-07!79;UBERON:0001048!4.69e-07!168;UBERON:0001981!4.77e-07!60;UBERON:0007500!4.77e-07!60;UBERON:0004537!4.77e-07!60;UBERON:0006965!4.77e-07!60;UBERON:0004111!6.45e-07!241;UBERON:0003886!7.00e-07!63;UBERON:0001004!8.29e-07!72;UBERON:0002097!8.94e-07!40 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.80e-13,99;UBERON:0002100,6.11e-12,199;UBERON:0004923,2.24e-10,66;UBERON:0004872,1.60e-09,83;UBERON:0004119,1.98e-09,160;UBERON:0000925,1.98e-09,160;UBERON:0006595,1.98e-09,160;UBERON:0000922,2.39e-09,592;UBERON:0005423,2.85e-09,581;UBERON:0002050,6.47e-09,564;UBERON:0000486,2.45e-08,83;UBERON:0000923,2.90e-08,560;UBERON:0010316,2.90e-08,560;UBERON:0005291,2.90e-08,560;UBERON:0006598,2.90e-08,560;UBERON:0010317,2.90e-08,560;UBERON:0002532,2.90e-08,560;UBERON:0003914,5.51e-08,117;UBERON:0002553,1.42e-07,61;UBERON:0000119,2.47e-07,309;UBERON:0002199,2.97e-07,46;UBERON:0002416,2.97e-07,46;UBERON:0000055,3.42e-07,68;UBERON:0002049,6.49e-07,78;UBERON:0007798,6.49e-07,78;UBERON:0007500,7.30e-07,59;UBERON:0001981,7.30e-07,59;UBERON:0004537,7.30e-07,59;UBERON:0006965,7.30e-07,59;UBERON:0000483,9.06e-07,306;UBERON:0002097,9.73e-07,41 | |||
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| ||
|short_description=p3@ZMYND8 | |||
}} | }} |
Latest revision as of 15:31, 16 September 2015
Short description: | p3@ZMYND8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZMYND8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000468376, uc002xtg.2_5end |
EntrezGene: | ZMYND8 |
HGNC: | 9397 |
UniProt: | Q5JV90 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.85e-11 | 253 |
fibroblast | 1.20e-08 | 76 |
respiratory epithelial cell | 8.08e-08 | 13 |
skin fibroblast | 5.80e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
surface structure | 3.80e-13 | 99 |
trunk | 6.11e-12 | 199 |
organ component layer | 2.24e-10 | 66 |
splanchnic layer of lateral plate mesoderm | 1.60e-09 | 83 |
endoderm-derived structure | 1.98e-09 | 160 |
endoderm | 1.98e-09 | 160 |
presumptive endoderm | 1.98e-09 | 160 |
embryo | 2.39e-09 | 592 |
developing anatomical structure | 2.85e-09 | 581 |
embryonic structure | 6.47e-09 | 564 |
multilaminar epithelium | 2.45e-08 | 83 |
germ layer | 2.90e-08 | 560 |
germ layer / neural crest | 2.90e-08 | 560 |
embryonic tissue | 2.90e-08 | 560 |
presumptive structure | 2.90e-08 | 560 |
germ layer / neural crest derived structure | 2.90e-08 | 560 |
epiblast (generic) | 2.90e-08 | 560 |
epithelial tube | 5.51e-08 | 117 |
anatomical cavity | 1.42e-07 | 61 |
cell layer | 2.47e-07 | 309 |
integument | 2.97e-07 | 46 |
integumental system | 2.97e-07 | 46 |
vessel | 3.42e-07 | 68 |
vasculature | 6.49e-07 | 78 |
vascular system | 6.49e-07 | 78 |
epithelial tube open at both ends | 7.30e-07 | 59 |
blood vessel | 7.30e-07 | 59 |
blood vasculature | 7.30e-07 | 59 |
vascular cord | 7.30e-07 | 59 |
epithelium | 9.06e-07 | 306 |
skin of body | 9.73e-07 | 41 |