FFCP PHASE1:Hg19::chr13:113812956..113812967,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8858 | |EntrezGene=8858 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9460 | |HGNC=9460 | ||
|TSSclassifier=strong | |||
|UniProt=P22891 | |UniProt=P22891 | ||
|association_with_transcript=0bp_to_ENST00000342783,ENST00000375547,NM_003891,uc001vta.1,uc010agr.1_5end | |association_with_transcript=0bp_to_ENST00000342783,ENST00000375547,NM_003891,uc001vta.1,uc010agr.1_5end | ||
|cluster_id=chr13:113812956..113812967,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_1_at_PROZ_5end | |description=CAGE_peak_1_at_PROZ_5end | ||
|id=chr13:113812956..113812967,+ | |id=chr13:113812956..113812967,+ | ||
|ontology_enrichment_celltype=CL:0000181!2.86e-26!12;CL:0000417!2.86e-26!12;CL:0000668!2.86e-26!12;CL:0000414!2.86e-26!12;CL:0000412!2.86e-26!12;CL:0000182!2.86e-26!12;CL:0000223!9.44e-11!59;CL:0002563!1.59e-09!4 | |ontology_enrichment_celltype=CL:0000181!2.86e-26!12;CL:0000417!2.86e-26!12;CL:0000668!2.86e-26!12;CL:0000414!2.86e-26!12;CL:0000412!2.86e-26!12;CL:0000182!2.86e-26!12;CL:0000223!9.44e-11!59;CL:0002563!1.59e-09!4 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.84e-45;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.84e-45,12;CL:0000223,2.79e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.39e-34;11!UBERON:0009497;2.68e-29;13!UBERON:0003104;1.01e-23;31!UBERON:0001041;9.29e-13;30!CL:0000223;3.99e-07;58!UBERON:0003918;5.68e-07;10!UBERON:0007687;5.68e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.00e-29!19;UBERON:0006925!5.00e-29!19;UBERON:0008836!5.00e-29!19;UBERON:0005057!2.83e-26!26;UBERON:0008835!6.13e-25!22;UBERON:0003894!6.13e-25!22;UBERON:0009854!8.19e-24!23;UBERON:0007499!7.88e-22!25;UBERON:0009497!7.88e-22!25;UBERON:0000015!7.88e-22!25;UBERON:0002423!7.88e-22!25;UBERON:0006235!7.88e-22!25;UBERON:0004161!7.88e-22!25;UBERON:0005172!4.68e-21!55;UBERON:0005173!4.68e-21!55;UBERON:0009856!5.94e-21!26;UBERON:0002417!8.62e-19!61;UBERON:0000916!8.62e-19!61;UBERON:0003929!5.92e-18!54;UBERON:0002365!2.06e-17!31;UBERON:0002330!2.06e-17!31;UBERON:0002368!2.64e-15!35;UBERON:0000949!1.13e-11!45;UBERON:0005911!3.23e-11!82;UBERON:0002530!6.91e-11!59;UBERON:0001301!6.33e-10!1;UBERON:0005177!7.48e-10!107;UBERON:0001242!1.59e-09!4;UBERON:0001262!1.59e-09!4;UBERON:0004786!1.59e-09!4;UBERON:0004808!1.59e-09!4;UBERON:0001277!1.59e-09!4;UBERON:0009569!3.19e-09!113;UBERON:0004921!3.85e-09!129;UBERON:0004185!3.85e-09!129;UBERON:0003350!8.61e-08!5;UBERON:0001007!3.00e-07!155;UBERON:0001555!3.00e-07!155;UBERON:0007026!3.00e-07!155 | |ontology_enrichment_uberon=UBERON:0002107!5.00e-29!19;UBERON:0006925!5.00e-29!19;UBERON:0008836!5.00e-29!19;UBERON:0005057!2.83e-26!26;UBERON:0008835!6.13e-25!22;UBERON:0003894!6.13e-25!22;UBERON:0009854!8.19e-24!23;UBERON:0007499!7.88e-22!25;UBERON:0009497!7.88e-22!25;UBERON:0000015!7.88e-22!25;UBERON:0002423!7.88e-22!25;UBERON:0006235!7.88e-22!25;UBERON:0004161!7.88e-22!25;UBERON:0005172!4.68e-21!55;UBERON:0005173!4.68e-21!55;UBERON:0009856!5.94e-21!26;UBERON:0002417!8.62e-19!61;UBERON:0000916!8.62e-19!61;UBERON:0003929!5.92e-18!54;UBERON:0002365!2.06e-17!31;UBERON:0002330!2.06e-17!31;UBERON:0002368!2.64e-15!35;UBERON:0000949!1.13e-11!45;UBERON:0005911!3.23e-11!82;UBERON:0002530!6.91e-11!59;UBERON:0001301!6.33e-10!1;UBERON:0005177!7.48e-10!107;UBERON:0001242!1.59e-09!4;UBERON:0001262!1.59e-09!4;UBERON:0004786!1.59e-09!4;UBERON:0004808!1.59e-09!4;UBERON:0001277!1.59e-09!4;UBERON:0009569!3.19e-09!113;UBERON:0004921!3.85e-09!129;UBERON:0004185!3.85e-09!129;UBERON:0003350!8.61e-08!5;UBERON:0001007!3.00e-07!155;UBERON:0001555!3.00e-07!155;UBERON:0007026!3.00e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;8.18e-51;19!UBERON:0006925;8.18e-51;19!UBERON:0002423;1.58e-38;25!UBERON:0002365;8.17e-30;31!UBERON:0002330;8.17e-30;31!UBERON:0002368;2.67e-26;33!UBERON:0000949;3.14e-19;43!UBERON:0005172;3.91e-18;52!UBERON:0005173;3.91e-18;52!UBERON:0002417;4.18e-14;58!UBERON:0000916;4.18e-14;58!UBERON:0002530;5.26e-10;57!UBERON:0001007;4.04e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.18e-51,19;UBERON:0006925,8.18e-51,19;UBERON:0008836,8.18e-51,19;UBERON:0008835,7.79e-44,22;UBERON:0003894,7.79e-44,22;UBERON:0009854,6.52e-42,23;UBERON:0007499,1.58e-38,25;UBERON:0009497,1.58e-38,25;UBERON:0000015,1.58e-38,25;UBERON:0002423,1.58e-38,25;UBERON:0006235,1.58e-38,25;UBERON:0004161,1.58e-38,25;UBERON:0009856,4.97e-37,26;UBERON:0002365,5.48e-31,31;UBERON:0002330,5.48e-31,31;UBERON:0002368,2.16e-27,35;UBERON:0005172,2.29e-27,54;UBERON:0005173,2.29e-27,54;UBERON:0002417,1.49e-24,60;UBERON:0000916,1.49e-24,60;UBERON:0000949,3.42e-21,45;UBERON:0003929,1.44e-17,54;UBERON:0002530,4.96e-16,59;UBERON:0005177,3.08e-14,101;UBERON:0009569,9.51e-13,112;UBERON:0005911,2.33e-11,82;UBERON:0001041,1.14e-10,87;UBERON:0003104,1.26e-08,160;UBERON:0009142,1.26e-08,160;UBERON:0003914,9.42e-08,117;UBERON:0004921,1.31e-07,118;UBERON:0005256,2.10e-07,122;UBERON:0002100,1.00e-06,199 | |||
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|short_description=p1@PROZ | |short_description=p1@PROZ | ||
}} | }} |
Latest revision as of 15:25, 16 September 2015
Short description: | p1@PROZ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PROZ_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000342783, ENST00000375547, NM_003891, uc001vta.1, uc010agr.1_5end |
EntrezGene: | PROZ |
HGNC: | 9460 |
UniProt: | P22891 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.84e-45 | 12 |
endodermal cell | 2.79e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 8.18e-51 | 19 |
digestive gland | 8.18e-51 | 19 |
liver bud | 8.18e-51 | 19 |
hepatic diverticulum | 7.79e-44 | 22 |
liver primordium | 7.79e-44 | 22 |
digestive tract diverticulum | 6.52e-42 | 23 |
epithelial sac | 1.58e-38 | 25 |
epithelium of foregut-midgut junction | 1.58e-38 | 25 |
anatomical boundary | 1.58e-38 | 25 |
hepatobiliary system | 1.58e-38 | 25 |
foregut-midgut junction | 1.58e-38 | 25 |
septum transversum | 1.58e-38 | 25 |
sac | 4.97e-37 | 26 |
exocrine gland | 5.48e-31 | 31 |
exocrine system | 5.48e-31 | 31 |
endocrine gland | 2.16e-27 | 35 |
abdomen element | 2.29e-27 | 54 |
abdominal segment element | 2.29e-27 | 54 |
abdominal segment of trunk | 1.49e-24 | 60 |
abdomen | 1.49e-24 | 60 |
endocrine system | 3.42e-21 | 45 |
gut epithelium | 1.44e-17 | 54 |
gland | 4.96e-16 | 59 |
trunk region element | 3.08e-14 | 101 |
subdivision of trunk | 9.51e-13 | 112 |
endo-epithelium | 2.33e-11 | 82 |
foregut | 1.14e-10 | 87 |
mesenchyme | 1.26e-08 | 160 |
entire embryonic mesenchyme | 1.26e-08 | 160 |
epithelial tube | 9.42e-08 | 117 |
subdivision of digestive tract | 1.31e-07 | 118 |
trunk mesenchyme | 2.10e-07 | 122 |
trunk | 1.00e-06 | 199 |