FFCP PHASE1:Hg19::chrX:92928539..92928548,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4675 | |EntrezGene=4675 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7639 | |HGNC=7639 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000485425_5end | |association_with_transcript=0bp_to_ENST00000485425_5end | ||
|cluster_id=chrX:92928539..92928548,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_4_at_NAP1L3_5end | |description=CAGE_peak_4_at_NAP1L3_5end | ||
|id=chrX:92928539..92928548,- | |id=chrX:92928539..92928548,- | ||
|ontology_enrichment_celltype=CL:0000540!5.23e-07!6;CL:0000031!5.23e-07!6;CL:0000404!5.23e-07!6 | |ontology_enrichment_celltype=CL:0000540!5.23e-07!6;CL:0000031!5.23e-07!6;CL:0000404!5.23e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.07e-11;6!CL:0000404;1.07e-11;6!CL:0002322;6.21e-09;5!CL:0002321;1.03e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.43e-12,8;CL:0000540,1.05e-11,6;CL:0000031,1.05e-11,6;CL:0000404,1.05e-11,6;CL:0002322,3.31e-09,5 | |||
|ontology_enrichment_development_v019=CL:0000031;1.07e-11;6!UBERON:0006601;1.36e-11;82!UBERON:0006241;8.87e-09;3!UBERON:0003057;8.87e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.43e-42!94;UBERON:0001016!1.43e-42!94;UBERON:0005743!2.12e-42!86;UBERON:0001017!9.76e-42!82;UBERON:0001049!9.86e-42!57;UBERON:0005068!9.86e-42!57;UBERON:0006241!9.86e-42!57;UBERON:0007135!9.86e-42!57;UBERON:0002616!1.55e-35!59;UBERON:0002346!1.06e-34!90;UBERON:0003075!7.95e-34!86;UBERON:0007284!7.95e-34!86;UBERON:0002780!1.70e-32!41;UBERON:0001890!1.70e-32!41;UBERON:0006240!1.70e-32!41;UBERON:0000955!2.41e-32!69;UBERON:0006238!2.41e-32!69;UBERON:0003080!2.49e-31!42;UBERON:0002020!1.87e-27!34;UBERON:0003528!1.87e-27!34;UBERON:0003056!2.75e-27!61;UBERON:0001893!5.27e-27!34;UBERON:0001869!4.86e-26!32;UBERON:0002791!5.53e-26!33;UBERON:0000956!3.87e-22!25;UBERON:0000203!3.87e-22!25;UBERON:0000924!2.08e-21!173;UBERON:0006601!2.08e-21!173;UBERON:0002619!9.81e-21!22;UBERON:0004121!1.77e-20!169;UBERON:0007023!2.51e-19!115;UBERON:0001950!7.14e-19!20;UBERON:0000033!2.45e-18!123;UBERON:0000153!1.67e-17!129;UBERON:0007811!1.67e-17!129;UBERON:0003076!2.77e-11!15;UBERON:0003057!2.77e-11!15;UBERON:0004732!1.46e-09!13;UBERON:0004733!9.24e-09!12;UBERON:0002028!9.24e-09!12;UBERON:0007277!9.24e-09!12;UBERON:0001871!1.43e-08!7;UBERON:0000200!1.95e-07!6;UBERON:0000025!2.60e-07!194;UBERON:0001894!7.36e-07!7;UBERON:0006222!7.36e-07!7;UBERON:0002308!7.89e-07!9;UBERON:0000125!7.89e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.72e-48;22!UBERON:0003528;2.12e-44;34!UBERON:0002020;2.12e-44;34!UBERON:0001869;6.41e-44;32!UBERON:0001950;1.54e-43;20!UBERON:0000956;3.44e-42;25!UBERON:0000203;3.44e-42;25!UBERON:0002791;1.32e-40;32!UBERON:0001893;1.75e-38;34!UBERON:0002780;4.92e-35;41!UBERON:0001890;4.92e-35;41!UBERON:0000073;1.14e-31;53!UBERON:0002616;1.14e-31;53!UBERON:0000955;4.74e-22;68!UBERON:0001017;1.20e-21;75!UBERON:0001016;1.27e-20;83!UBERON:0000200;6.05e-17;6!UBERON:0001872;1.37e-14;5!UBERON:0001871;2.33e-13;6!UBERON:0000349;3.63e-13;5!UBERON:0000125;1.86e-10;9!UBERON:0002308;1.86e-10;9!UBERON:0002420;6.67e-10;9!UBERON:0007245;6.67e-10;9!UBERON:0010009;6.67e-10;9!UBERON:0010011;6.67e-10;9!UBERON:0000454;6.67e-10;9!UBERON:0000988;9.20e-10;3!UBERON:0004732;1.94e-09;13!UBERON:0001870;2.44e-09;3!UBERON:0007023;2.59e-09;114!UBERON:0002021;3.73e-09;5!UBERON:0011216;7.03e-09;132!UBERON:0002240;8.87e-09;3!UBERON:0005174;8.87e-09;3!UBERON:0001137;8.87e-09;3!UBERON:0002298;6.13e-08;6!UBERON:0004733;9.10e-08;12!UBERON:0002028;9.10e-08;12!UBERON:0002680;1.17e-07;9!UBERON:0001895;1.17e-07;9!UBERON:0002771;6.07e-07;2!UBERON:0002148;6.07e-07;2!UBERON:0006331;6.07e-07;2!UBERON:0009662;6.07e-07;2!UBERON:0002702;9.04e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.29e-66,89;UBERON:0001017,6.61e-66,81;UBERON:0001049,3.50e-64,56;UBERON:0005068,3.50e-64,56;UBERON:0006241,3.50e-64,56;UBERON:0007135,3.50e-64,56;UBERON:0000073,1.11e-57,53;UBERON:0002616,1.11e-57,53;UBERON:0002780,7.90e-52,41;UBERON:0001890,7.90e-52,41;UBERON:0003080,7.90e-52,41;UBERON:0006240,7.90e-52,41;UBERON:0003528,2.98e-51,34;UBERON:0002020,2.98e-51,34;UBERON:0001869,1.84e-50,32;UBERON:0002619,3.46e-49,22;UBERON:0000955,5.88e-48,68;UBERON:0006238,5.88e-48,68;UBERON:0001893,3.84e-47,34;UBERON:0002791,3.29e-46,32;UBERON:0003075,2.41e-45,82;UBERON:0007284,2.41e-45,82;UBERON:0001950,3.01e-44,20;UBERON:0000956,8.42e-43,25;UBERON:0000203,8.42e-43,25;UBERON:0002346,9.81e-43,86;UBERON:0003056,3.90e-37,61;UBERON:0010371,2.15e-35,104;UBERON:0004121,1.36e-31,171;UBERON:0000924,1.36e-31,171;UBERON:0006601,1.36e-31,171;UBERON:0010314,7.36e-29,132;UBERON:0007023,7.65e-27,114;UBERON:0011216,3.52e-21,223;UBERON:0000200,4.48e-17,6;UBERON:0001872,8.63e-15,5;UBERON:0000349,1.34e-13,5;UBERON:0001871,1.58e-13,6;UBERON:0003076,2.68e-13,15;UBERON:0003057,2.68e-13,15;UBERON:0000025,1.81e-12,192;UBERON:0000125,3.46e-10,9;UBERON:0002308,3.46e-10,9;UBERON:0002420,6.56e-10,9;UBERON:0007245,6.56e-10,9;UBERON:0010009,6.56e-10,9;UBERON:0010011,6.56e-10,9;UBERON:0000454,6.56e-10,9;UBERON:0000988,8.40e-10,3;UBERON:0004732,1.40e-09,13;UBERON:0001870,1.62e-09,3;UBERON:0002021,2.34e-09,5;UBERON:0002240,1.74e-08,3;UBERON:0005174,1.74e-08,3;UBERON:0001137,1.74e-08,3;UBERON:0002298,4.15e-08,6;UBERON:0004111,4.61e-08,240;UBERON:0004733,6.43e-08,12;UBERON:0002028,6.43e-08,12;UBERON:0007277,6.43e-08,12;UBERON:0002680,1.03e-07,9;UBERON:0001895,1.03e-07,9;UBERON:0010092,1.03e-07,9;UBERON:0002148,5.60e-07,2;UBERON:0006331,5.60e-07,2;UBERON:0009662,5.60e-07,2;UBERON:0002702,7.46e-07,2;UBERON:0002771,7.89e-07,2 | |||
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| ||
|short_description=p4@NAP1L3 | |short_description=p4@NAP1L3 | ||
}} | }} |
Latest revision as of 14:29, 16 September 2015
Short description: | p4@NAP1L3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NAP1L3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000485425_5end |
EntrezGene: | NAP1L3 |
HGNC: | 7639 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.43e-12 | 8 |
neuron | 1.05e-11 | 6 |
neuroblast | 1.05e-11 | 6 |
electrically signaling cell | 1.05e-11 | 6 |
embryonic stem cell | 3.31e-09 | 5 |