FFCP PHASE1:Hg19::chr2:25862142..25862153,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1838 | |EntrezGene=1838 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3058 | |HGNC=3058 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=43bp_to_ENST00000460418_5end | |||
|cluster_id=chr2:25862142..25862153,- | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_19_at_DTNB_5end | |||
|id=chr2:25862142..25862153,- | |||
|ontology_enrichment_celltype=CL:0002541!1.29e-22!3;CL:0002536!5.52e-15!2;CL:0002537!1.83e-13!5;CL:0002557!3.57e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0002541;4.20e-147;3!CL:0000349;3.83e-42;19!CL:0000723;3.80e-13;61!CL:0000134;3.39e-12;55!CL:0002537;3.42e-11;5!CL:0000048;5.89e-08;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,5.41e-147,3;CL:0000349,3.83e-42,19;CL:0002537,3.26e-11,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!6.29e-40!14;UBERON:0000158!6.29e-40!14;UBERON:0000305!3.78e-25!7;UBERON:0000478!1.03e-22!24;UBERON:0000476!1.29e-22!3;UBERON:0000920!1.29e-22!3;UBERON:0004871!5.41e-22!8;UBERON:0003124!7.31e-17!7;UBERON:0004923!9.85e-09!57;UBERON:0003296!6.94e-08!4;UBERON:0010133!6.94e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.20e-147;3!UBERON:0000920;4.20e-147;3!UBERON:0005631;5.78e-79;10!UBERON:0000158;5.78e-79;10!UBERON:0000478;1.33e-33;24!UBERON:0000305;2.26e-08;7!UBERON:0004923;5.05e-07;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,5.41e-147,3;UBERON:0003124,8.52e-64,7;UBERON:0005631,9.13e-57,14;UBERON:0000158,9.13e-57,14;UBERON:0000478,1.33e-33,24;UBERON:0004923,7.62e-13,66;UBERON:0000305,2.18e-08,7;UBERON:0004871,1.69e-07,8 | |||
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|short_description=p19@DTNB | |||
}} | }} |
Latest revision as of 14:09, 16 September 2015
Short description: | p19@DTNB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_DTNB_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 43bp_to_ENST00000460418_5end |
EntrezGene: | DTNB |
HGNC: | 3058 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 5.41e-147 | 3 |
extraembryonic cell | 3.83e-42 | 19 |
amnion mesenchymal stem cell | 3.26e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 5.41e-147 | 3 |
chorion | 8.52e-64 | 7 |
extraembryonic membrane | 9.13e-57 | 14 |
membranous layer | 9.13e-57 | 14 |
extraembryonic structure | 1.33e-33 | 24 |
organ component layer | 7.62e-13 | 66 |
amnion | 2.18e-08 | 7 |
somatic layer of lateral plate mesoderm | 1.69e-07 | 8 |