FFCP PHASE1:Hg19::chr2:25720514..25720525,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:25720514..25720525,-
|short_description=p16@DTNB
|description=CAGE_peak_16_at_DTNB_5end
|association_with_transcript=0bp_to_ENST00000481841_5end
|EntrezGe...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1838 | |EntrezGene=1838 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3058 | |HGNC=3058 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000481841_5end | |||
|cluster_id=chr2:25720514..25720525,- | |||
|coexpression_cluster_id=C162 | |||
|description=CAGE_peak_16_at_DTNB_5end | |||
|id=chr2:25720514..25720525,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.17e-25;3!UBERON:0003057;3.17e-25;3!UBERON:0006222;2.47e-19;1!UBERON:0005425;2.47e-19;1!UBERON:0006601;6.93e-08;82!UBERON:0003056;2.55e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.45e-85!57;UBERON:0005068!8.45e-85!57;UBERON:0006241!8.45e-85!57;UBERON:0007135!8.45e-85!57;UBERON:0002616!1.58e-65!59;UBERON:0001017!7.86e-65!82;UBERON:0005743!1.32e-61!86;UBERON:0000073!3.79e-59!94;UBERON:0001016!3.79e-59!94;UBERON:0000955!9.49e-59!69;UBERON:0006238!9.49e-59!69;UBERON:0003075!2.28e-58!86;UBERON:0007284!2.28e-58!86;UBERON:0002780!3.10e-57!41;UBERON:0001890!3.10e-57!41;UBERON:0006240!3.10e-57!41;UBERON:0003080!8.56e-56!42;UBERON:0002346!1.55e-55!90;UBERON:0002020!2.40e-51!34;UBERON:0003528!2.40e-51!34;UBERON:0001893!5.14e-51!34;UBERON:0007023!9.20e-49!115;UBERON:0002791!4.97e-47!33;UBERON:0001869!6.18e-43!32;UBERON:0002308!3.51e-38!9;UBERON:0000125!3.51e-38!9;UBERON:0003056!3.08e-37!61;UBERON:0002298!4.82e-34!8;UBERON:0000033!7.86e-31!123;UBERON:0004121!1.31e-30!169;UBERON:0000924!9.09e-30!173;UBERON:0006601!9.09e-30!173;UBERON:0003076!1.91e-29!15;UBERON:0003057!1.91e-29!15;UBERON:0000153!3.79e-29!129;UBERON:0007811!3.79e-29!129;UBERON:0009663!1.71e-27!7;UBERON:0002619!9.28e-26!22;UBERON:0001950!3.42e-23!20;UBERON:0000956!1.50e-22!25;UBERON:0000203!1.50e-22!25;UBERON:0002420!2.82e-21!9;UBERON:0007245!2.82e-21!9;UBERON:0010009!2.82e-21!9;UBERON:0010011!2.82e-21!9;UBERON:0000454!2.82e-21!9;UBERON:0000025!6.26e-21!194;UBERON:0004732!9.71e-21!13;UBERON:0000988!4.66e-18!3;UBERON:0002240!5.85e-18!3;UBERON:0006331!7.32e-18!3;UBERON:0001896!1.28e-17!3;UBERON:0005290!1.28e-17!3;UBERON:0010096!1.28e-17!3;UBERON:0004733!1.15e-16!12;UBERON:0002028!1.15e-16!12;UBERON:0007277!1.15e-16!12;UBERON:0004111!1.19e-15!241;UBERON:0000200!2.70e-14!6;UBERON:0000483!6.71e-13!309;UBERON:0002148!1.02e-12!2;UBERON:0009662!1.02e-12!2;UBERON:0000119!1.03e-12!312;UBERON:0000369!1.77e-12!4;UBERON:0002435!1.77e-12!4;UBERON:0000204!1.77e-12!4;UBERON:0010082!1.77e-12!4;UBERON:0005162!1.91e-12!2;UBERON:0000122!1.91e-12!2;UBERON:0001875!2.40e-12!2;UBERON:0006514!2.40e-12!2;UBERON:0000477!3.27e-12!286;UBERON:0001897!4.19e-12!2;UBERON:0005174!5.66e-11!5;UBERON:0001137!5.66e-11!5;UBERON:0002021!2.55e-10!5;UBERON:0000064!3.92e-10!219;UBERON:0000475!5.11e-09!365;UBERON:0002771!5.25e-08!3;UBERON:0000062!6.12e-08!511;UBERON:0005383!6.50e-08!3;UBERON:0005382!6.50e-08!3;UBERON:0001894!9.32e-08!7;UBERON:0006222!9.32e-08!7;UBERON:0000941!4.18e-07!1;UBERON:0004904!4.18e-07!1;UBERON:0002464!4.18e-07!1;UBERON:0001021!4.18e-07!1;UBERON:0001785!4.18e-07!1;UBERON:0002336!5.26e-07!1;UBERON:0001018!5.26e-07!1;UBERON:0002473!5.26e-07!1;UBERON:0005340!5.26e-07!1;UBERON:0002316!5.26e-07!1;UBERON:0003544!5.26e-07!1;UBERON:0001020!5.26e-07!1;UBERON:0005970!5.26e-07!1;UBERON:0002437!5.26e-07!1;UBERON:0002038!7.39e-07!1;UBERON:0009661!7.39e-07!1;UBERON:0002902!9.25e-07!1;UBERON:0009899!9.25e-07!1;UBERON:0007190!9.79e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000988;2.85e-54;3!UBERON:0002298;4.66e-48;6!UBERON:0002148;8.17e-37;2!UBERON:0005162;8.17e-37;2!UBERON:0000122;8.17e-37;2!UBERON:0006331;8.17e-37;2!UBERON:0009662;8.17e-37;2!UBERON:0004732;1.43e-34;13!UBERON:0002240;3.17e-25;3!UBERON:0005174;3.17e-25;3!UBERON:0001137;3.17e-25;3!UBERON:0004733;2.60e-24;12!UBERON:0002028;2.60e-24;12!UBERON:0002336;2.47e-19;1!UBERON:0000941;2.47e-19;1!UBERON:0001785;2.47e-19;1!UBERON:0002464;2.47e-19;1!UBERON:0004904;2.47e-19;1!UBERON:0011215;2.47e-19;1!UBERON:0001018;2.47e-19;1!UBERON:0001021;2.47e-19;1!UBERON:0002473;2.47e-19;1!UBERON:0005340;2.47e-19;1!UBERON:0003544;2.47e-19;1!UBERON:0005970;2.47e-19;1!UBERON:0002316;2.47e-19;1!UBERON:0001020;2.47e-19;1!UBERON:0002437;2.47e-19;1!UBERON:0002680;1.21e-18;9!UBERON:0000125;1.21e-18;9!UBERON:0002308;1.21e-18;9!UBERON:0001895;1.21e-18;9!UBERON:0000073;4.26e-12;53!UBERON:0002616;4.26e-12;53!UBERON:0001954;2.37e-10;2!UBERON:0003714;2.37e-10;2!UBERON:0001875;2.37e-10;2!UBERON:0003022;2.37e-10;2!UBERON:0002421;2.37e-10;2!UBERON:0006514;2.37e-10;2!UBERON:0002600;2.37e-10;2!UBERON:0001016;4.27e-09;83!UBERON:0001017;1.53e-08;75!UBERON:0007023;2.33e-08;114!UBERON:0000955;9.79e-08;68!UBERON:0001896;2.55e-07;3!UBERON:0005290;2.55e-07;3!UBERON:0003528;2.61e-07;34!UBERON:0002020;2.61e-07;34!UBERON:0002780;9.41e-07;41!UBERON:0001890;9.41e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000988,1.51e-54,3;UBERON:0002298,1.99e-48,6;UBERON:0003076,2.97e-43,15;UBERON:0003057,2.97e-43,15;UBERON:0002148,2.73e-37,2;UBERON:0006331,2.73e-37,2;UBERON:0009662,2.73e-37,2;UBERON:0005162,2.04e-36,2;UBERON:0000122,2.04e-36,2;UBERON:0004732,9.10e-35,13;UBERON:0001049,6.12e-31,56;UBERON:0005068,6.12e-31,56;UBERON:0006241,6.12e-31,56;UBERON:0007135,6.12e-31,56;UBERON:0003075,1.34e-25,82;UBERON:0007284,1.34e-25,82;UBERON:0002240,2.99e-25,3;UBERON:0005174,2.99e-25,3;UBERON:0001137,2.99e-25,3;UBERON:0004733,1.71e-24,12;UBERON:0002028,1.71e-24,12;UBERON:0007277,1.71e-24,12;UBERON:0002346,2.13e-24,86;UBERON:0001016,4.81e-23,89;UBERON:0001017,4.27e-21,81;UBERON:0000073,7.40e-21,53;UBERON:0002616,7.40e-21,53;UBERON:0010371,4.01e-20,104;UBERON:0000941,2.71e-19,1;UBERON:0001785,2.71e-19,1;UBERON:0002464,2.71e-19,1;UBERON:0004904,2.71e-19,1;UBERON:0001021,2.71e-19,1;UBERON:0003902,2.71e-19,1;UBERON:0005425,2.71e-19,1;UBERON:0002336,5.62e-19,1;UBERON:0011215,5.62e-19,1;UBERON:0001018,5.62e-19,1;UBERON:0002473,5.62e-19,1;UBERON:0005340,5.62e-19,1;UBERON:0003544,5.62e-19,1;UBERON:0005970,5.62e-19,1;UBERON:0002316,5.62e-19,1;UBERON:0001020,5.62e-19,1;UBERON:0002437,5.62e-19,1;UBERON:0002680,9.79e-19,9;UBERON:0001895,9.79e-19,9;UBERON:0010092,9.79e-19,9;UBERON:0000125,1.04e-18,9;UBERON:0002308,1.04e-18,9;UBERON:0007023,1.73e-18,114;UBERON:0000955,5.29e-16,68;UBERON:0006238,5.29e-16,68;UBERON:0010314,9.24e-16,132;UBERON:0004121,6.88e-12,171;UBERON:0000924,6.88e-12,171;UBERON:0006601,6.88e-12,171;UBERON:0001954,1.89e-10,2;UBERON:0003022,1.89e-10,2;UBERON:0002421,1.89e-10,2;UBERON:0002600,1.89e-10,2;UBERON:0003714,2.49e-10,2;UBERON:0001875,3.27e-10,2;UBERON:0006514,3.27e-10,2;UBERON:0011216,6.17e-09,223;UBERON:0000025,1.08e-08,192;UBERON:0003528,1.27e-08,34;UBERON:0002020,1.27e-08,34;UBERON:0001896,2.05e-07,3;UBERON:0005290,2.05e-07,3;UBERON:0010096,2.05e-07,3;UBERON:0003056,2.71e-07,61;UBERON:0002780,3.84e-07,41;UBERON:0001890,3.84e-07,41;UBERON:0003080,3.84e-07,41;UBERON:0006240,3.84e-07,41;UBERON:0004111,8.43e-07,240 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07841812769083,0,1.40558667435203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.958337652243951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93924434542326,1.58679122091228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0.573409195690071,0.776503360757966,1.67660287941735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.478901577171454,0.205116364240755,0,0.276629009856872,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0,0,1.2914249265598,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53355240806901,1.48523200163543,0.8453114551668,0,0,0,0,0,0,0,0,0,0.573358332605805,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.517164979309476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07841812769083,0,1.40558667435203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.958337652243951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93924434542326,1.58679122091228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0.573409195690071,0.776503360757966,1.67660287941735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.478901577171454,0.205116364240755,0,0.276629009856872,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0,0,1.2914249265598,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53355240806901,1.48523200163543,0.8453114551668,0,0,0,0,0,0,0,0,0,0.573358332605805,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.517164979309476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p16@DTNB | |||
}} | }} |
Latest revision as of 14:01, 16 September 2015
Short description: | p16@DTNB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_DTNB_5end |
Coexpression cluster: | C162_spinal_locus_medulla_substantia_thalamus_globus_diencephalon |
Association with transcript: | 0bp_to_ENST00000481841_5end |
EntrezGene: | DTNB |
HGNC: | 3058 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data