FFCP PHASE1:Hg19::chr11:125821678..125821700,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=E9PP39 | |UniProt=E9PP39 | ||
|association_with_transcript=0bp_to_ENST00000531193,uc001qda.2_5end | |association_with_transcript=0bp_to_ENST00000531193,uc001qda.2_5end | ||
|cluster_id=chr11:125821678..125821700,+ | |||
|coexpression_cluster_id=C106 | |coexpression_cluster_id=C106 | ||
|description=CAGE_peak_1_at_ENST00000531193_5end,CAGE_peak_1_at_uc001qda.2_5end | |description=CAGE_peak_1_at_ENST00000531193_5end,CAGE_peak_1_at_uc001qda.2_5end | ||
|id=chr11:125821678..125821700,+ | |id=chr11:125821678..125821700,+ | ||
|ontology_enrichment_celltype=CL:0002195!1.62e-09!2;CL:0002571!1.62e-09!2 | |ontology_enrichment_celltype=CL:0002195!1.62e-09!2;CL:0002571!1.62e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000333;3.76e-10;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.87e-32;29!UBERON:0008801;7.68e-13;1!UBERON:0006595;3.36e-08;86!UBERON:0004872;1.68e-07;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;1.31e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.36e-08,6;DOID:0050687,1.49e-08,143;DOID:305,5.01e-08,106 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001737;2.14e-105;9!UBERON:0001557;2.14e-105;9!UBERON:0000072;2.55e-23;37!UBERON:0000065;1.20e-19;44!UBERON:0002106;2.78e-16;3!UBERON:0005795;7.68e-13;1!UBERON:0001831;7.68e-13;1!UBERON:0001567;7.68e-13;1!UBERON:0001004;2.57e-11;65!UBERON:0000013;3.76e-10;5!UBERON:0002410;3.76e-10;5!UBERON:0004177;3.76e-10;5!UBERON:0005057;3.76e-10;5!UBERON:0001829;4.69e-07;2!UBERON:0004089;4.69e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.90e-105,9;UBERON:0001557,1.53e-49,19;UBERON:0008947,2.59e-24,38;UBERON:0003258,2.59e-24,38;UBERON:0000072,1.82e-19,47;UBERON:0001041,6.47e-18,87;UBERON:0000065,8.24e-17,54;UBERON:0002106,3.01e-16,3;UBERON:0004854,3.01e-16,3;UBERON:0009034,3.01e-16,3;UBERON:0002095,3.01e-16,3;UBERON:0004782,3.01e-16,3;UBERON:0003281,3.01e-16,3;UBERON:0009664,3.01e-16,3;UBERON:0002296,3.01e-16,3;UBERON:0005602,3.01e-16,3;UBERON:0001179,3.01e-16,3;UBERON:0006293,3.01e-16,3;UBERON:0001004,9.26e-15,74;UBERON:0001831,1.09e-12,1;UBERON:0001567,1.09e-12,1;UBERON:0008801,1.09e-12,1;UBERON:0004921,1.14e-12,118;UBERON:0000013,3.93e-10,5;UBERON:0002410,3.93e-10,5;UBERON:0001007,5.07e-10,145;UBERON:0001555,5.07e-10,145;UBERON:0007026,5.07e-10,145;UBERON:0001048,5.35e-09,160;UBERON:0004119,6.24e-09,160;UBERON:0000925,6.24e-09,160;UBERON:0006595,6.24e-09,160;UBERON:0011216,2.85e-08,223;UBERON:0004177,1.74e-07,7;UBERON:0005057,1.74e-07,7;UBERON:0001829,5.60e-07,2;UBERON:0004089,5.60e-07,2 | |||
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| ||
|short_description=p1@ENST00000531193,p1@uc001qda.2 | |short_description=p1@ENST00000531193,p1@uc001qda.2 | ||
}} | }} |
Latest revision as of 13:48, 16 September 2015
Short description: | p1@ENST00000531193, p1@uc001qda.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000531193_5end, CAGE_peak_1_at_uc001qda.2_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | 0bp_to_ENST00000531193, uc001qda.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.36e-08 | 6 |
cell type cancer | 1.49e-08 | 143 |
carcinoma | 5.01e-08 | 106 |