FFCP PHASE1:Hg19::chr9:139693759..139693793,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84960 | |EntrezGene=84960 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28236 | |HGNC=28236 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-73bp_to_ENST00000430612_5end | |association_with_transcript=-73bp_to_ENST00000430612_5end | ||
|cluster_id=chr9:139693759..139693793,+ | |||
|description=CAGE_peak_4_at_KIAA1984_5end | |description=CAGE_peak_4_at_KIAA1984_5end | ||
|id=chr9:139693759..139693793,+ | |id=chr9:139693759..139693793,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.07e-17;12!CL:0002535;1.36e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.25e-17,12;CL:0002535,1.36e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.46e-28;11!UBERON:0009497;3.51e-24;13!UBERON:0003104;2.64e-14;31!UBERON:0008425;3.50e-14;1!UBERON:0001041;1.79e-10;30 | |||
|ontology_enrichment_disease=DOID:5093!2.21e-12!4;DOID:1612!2.21e-12!4;DOID:305!3.61e-10!106;DOID:7!3.99e-08!39 | |ontology_enrichment_disease=DOID:5093!2.21e-12!4;DOID:1612!2.21e-12!4;DOID:305!3.61e-10!106;DOID:7!3.99e-08!39 | ||
|ontology_enrichment_disease_v019=DOID:5093;1.65e-28;4!DOID:1612;1.65e-28;4!DOID:7;6.84e-16;39!DOID:305;4.60e-10;106!DOID:299;4.22e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.99e-28,4;DOID:1612,1.99e-28,4;DOID:7,1.19e-19,39;DOID:305,2.24e-15,106;DOID:0050687,5.28e-11,143;DOID:299,4.55e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004921!7.16e-12!129;UBERON:0004185!7.16e-12!129;UBERON:0001007!3.86e-10!155;UBERON:0001555!3.86e-10!155;UBERON:0007026!3.86e-10!155;UBERON:0007023!5.09e-10!115;UBERON:0009856!5.14e-09!26;UBERON:0004119!1.19e-08!169;UBERON:0000925!1.19e-08!169;UBERON:0006595!1.19e-08!169;UBERON:0005911!3.84e-08!82;UBERON:0001155!7.76e-08!9;UBERON:0007499!1.14e-07!25;UBERON:0003929!8.47e-07!54;UBERON:0009854!9.00e-07!23;UBERON:0000481!9.96e-07!347 | |ontology_enrichment_uberon=UBERON:0004921!7.16e-12!129;UBERON:0004185!7.16e-12!129;UBERON:0001007!3.86e-10!155;UBERON:0001555!3.86e-10!155;UBERON:0007026!3.86e-10!155;UBERON:0007023!5.09e-10!115;UBERON:0009856!5.14e-09!26;UBERON:0004119!1.19e-08!169;UBERON:0000925!1.19e-08!169;UBERON:0006595!1.19e-08!169;UBERON:0005911!3.84e-08!82;UBERON:0001155!7.76e-08!9;UBERON:0007499!1.14e-07!25;UBERON:0003929!8.47e-07!54;UBERON:0009854!9.00e-07!23;UBERON:0000481!9.96e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.47e-16;19!UBERON:0006925;1.47e-16;19!UBERON:0002365;1.51e-13;31!UBERON:0002330;1.51e-13;31!UBERON:0002423;1.40e-12;25!UBERON:0000310;8.42e-12;10!UBERON:0001443;8.83e-11;11!UBERON:0002368;4.53e-09;33!UBERON:0006955;1.36e-07;2!UBERON:0004801;1.36e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.47e-16,19;UBERON:0006925,1.47e-16,19;UBERON:0008836,1.47e-16,19;UBERON:0002365,2.30e-14,31;UBERON:0002330,2.30e-14,31;UBERON:0008835,2.67e-14,22;UBERON:0003894,2.67e-14,22;UBERON:0009854,1.12e-13,23;UBERON:0007499,1.40e-12,25;UBERON:0009497,1.40e-12,25;UBERON:0000015,1.40e-12,25;UBERON:0002423,1.40e-12,25;UBERON:0006235,1.40e-12,25;UBERON:0004161,1.40e-12,25;UBERON:0009856,4.29e-12,26;UBERON:0000310,9.07e-12,10;UBERON:0001443,9.44e-11,11;UBERON:0002368,5.77e-09,35;UBERON:0005172,4.91e-08,54;UBERON:0005173,4.91e-08,54;UBERON:0009569,5.28e-08,112;UBERON:0006955,1.36e-07,2;UBERON:0004801,1.36e-07,2;UBERON:0002530,2.23e-07,59;UBERON:0002417,3.41e-07,60;UBERON:0000916,3.41e-07,60;UBERON:0000949,6.01e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68426486367398,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,2.51932747854276,0,0,0,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,1.04171104434093,4.72283999979457,0,0,0.254253650292766,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0.591095237907095,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,1.99052386215701,0.353830258013357,2.4441205797345,0,0,0,0,0,0,0,0,0,0,3.62972148145992,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15272333723285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,4.72699093843342,3.79112948553366,4.17901971895946,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0.129282956361551,0,0.171086837884329,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.0679697329768317,0.0657727735628491,0,0.444925607568277,0.235479278551542,0.157115589916002,0,0,1.29556554731173,0.9555033757741,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0.609589624911347,0,0,0,0.485710993059139,0,1.98950775161368,0,0,0,0.301925687133347,0.0771741581079447,0.437119121007915,0.940634592723046,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0.886889507080059,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68426486367398,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,2.51932747854276,0,0,0,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,1.04171104434093,4.72283999979457,0,0,0.254253650292766,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0.591095237907095,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,1.99052386215701,0.353830258013357,2.4441205797345,0,0,0,0,0,0,0,0,0,0,3.62972148145992,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15272333723285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,4.72699093843342,3.79112948553366,4.17901971895946,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0.129282956361551,0,0.171086837884329,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.0679697329768317,0.0657727735628491,0,0.444925607568277,0.235479278551542,0.157115589916002,0,0,1.29556554731173,0.9555033757741,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0.609589624911347,0,0,0,0.485710993059139,0,1.98950775161368,0,0,0,0.301925687133347,0.0771741581079447,0.437119121007915,0.940634592723046,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0.886889507080059,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@KIAA1984 | |short_description=p4@KIAA1984 | ||
}} | }} |
Latest revision as of 13:22, 16 September 2015
Short description: | p4@KIAA1984 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KIAA1984_5end |
Coexpression cluster: | NA |
Association with transcript: | -73bp_to_ENST00000430612_5end |
EntrezGene: | KIAA1984 |
HGNC: | 28236 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.25e-17 | 12 |
epithelial cell of cervix | 1.36e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 1.47e-16 | 19 |
digestive gland | 1.47e-16 | 19 |
liver bud | 1.47e-16 | 19 |
exocrine gland | 2.30e-14 | 31 |
exocrine system | 2.30e-14 | 31 |
hepatic diverticulum | 2.67e-14 | 22 |
liver primordium | 2.67e-14 | 22 |
digestive tract diverticulum | 1.12e-13 | 23 |
epithelial sac | 1.40e-12 | 25 |
epithelium of foregut-midgut junction | 1.40e-12 | 25 |
anatomical boundary | 1.40e-12 | 25 |
hepatobiliary system | 1.40e-12 | 25 |
foregut-midgut junction | 1.40e-12 | 25 |
septum transversum | 1.40e-12 | 25 |
sac | 4.29e-12 | 26 |
breast | 9.07e-12 | 10 |
chest | 9.44e-11 | 11 |
endocrine gland | 5.77e-09 | 35 |
abdomen element | 4.91e-08 | 54 |
abdominal segment element | 4.91e-08 | 54 |
subdivision of trunk | 5.28e-08 | 112 |
uterine epithelium | 1.36e-07 | 2 |
cervix epithelium | 1.36e-07 | 2 |
gland | 2.23e-07 | 59 |
abdominal segment of trunk | 3.41e-07 | 60 |
abdomen | 3.41e-07 | 60 |
endocrine system | 6.01e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.99e-28 | 4 |
breast cancer | 1.99e-28 | 4 |
disease of anatomical entity | 1.19e-19 | 39 |
carcinoma | 2.24e-15 | 106 |
cell type cancer | 5.28e-11 | 143 |
adenocarcinoma | 4.55e-08 | 25 |