FFCP PHASE1:Hg19::chr7:135412540..135412552,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26266 | |EntrezGene=26266 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15827 | |HGNC=15827 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=369bp_to_ENST00000478310_5end | |association_with_transcript=369bp_to_ENST00000478310_5end | ||
|cluster_id=chr7:135412540..135412552,- | |||
|coexpression_cluster_id=C160 | |coexpression_cluster_id=C160 | ||
|description=CAGE_peak_2_at_SLC13A4_5end | |description=CAGE_peak_2_at_SLC13A4_5end | ||
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|ontology_enrichment_celltype=CL:0002603!8.68e-12!3;CL:0000243!4.11e-08!15;CL:0000125!4.11e-08!15;CL:0000030!4.11e-08!15;CL:0000339!4.11e-08!15;CL:0000095!2.86e-07!17;CL:0000123!2.86e-07!17 | |ontology_enrichment_celltype=CL:0002603!8.68e-12!3;CL:0000243!4.11e-08!15;CL:0000125!4.11e-08!15;CL:0000030!4.11e-08!15;CL:0000339!4.11e-08!15;CL:0000095!2.86e-07!17;CL:0000123!2.86e-07!17 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;6.50e-54;3!UBERON:0005425;4.69e-19;1!UBERON:0006601;6.55e-09;82!UBERON:0006238;1.31e-07;10 | |ontology_enrichment_development_v019=UBERON:0003056;6.50e-54;3!UBERON:0005425;4.69e-19;1!UBERON:0006601;6.55e-09;82!UBERON:0006238;1.31e-07;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3093;4.78e-07;11 | |ontology_enrichment_disease_v019=DOID:3093;4.78e-07;11 | ||
|ontology_enrichment_disease_v019_2=DOID:3093,4.85e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0005743!9.28e-35!86;UBERON:0000073!1.03e-34!94;UBERON:0001016!1.03e-34!94;UBERON:0000955!3.96e-31!69;UBERON:0006238!3.96e-31!69;UBERON:0004732!5.45e-31!13;UBERON:0001017!2.99e-29!82;UBERON:0003075!5.38e-28!86;UBERON:0007284!5.38e-28!86;UBERON:0001896!1.14e-26!3;UBERON:0005290!1.14e-26!3;UBERON:0010096!1.14e-26!3;UBERON:0002346!1.24e-26!90;UBERON:0004733!7.89e-25!12;UBERON:0002028!7.89e-25!12;UBERON:0007277!7.89e-25!12;UBERON:0000033!2.02e-23!123;UBERON:0000153!3.38e-22!129;UBERON:0007811!3.38e-22!129;UBERON:0001049!4.49e-22!57;UBERON:0005068!4.49e-22!57;UBERON:0006241!4.49e-22!57;UBERON:0007135!4.49e-22!57;UBERON:0002616!2.90e-21!59;UBERON:0004121!4.20e-20!169;UBERON:0003076!8.69e-20!15;UBERON:0003057!8.69e-20!15;UBERON:0000924!1.44e-19!173;UBERON:0006601!1.44e-19!173;UBERON:0005162!4.09e-18!2;UBERON:0000122!4.09e-18!2;UBERON:0007023!6.99e-16!115;UBERON:0000966!9.07e-16!5;UBERON:0005388!9.07e-16!5;UBERON:0001802!9.07e-16!5;UBERON:0003056!2.12e-14!61;UBERON:0002037!7.06e-13!6;UBERON:0006215!7.06e-13!6;UBERON:0001894!2.87e-11!7;UBERON:0006222!2.87e-11!7;UBERON:0002298!2.34e-10!8;UBERON:0002336!5.31e-10!1;UBERON:0001018!5.31e-10!1;UBERON:0002473!5.31e-10!1;UBERON:0005340!5.31e-10!1;UBERON:0002316!5.31e-10!1;UBERON:0003544!5.31e-10!1;UBERON:0001020!5.31e-10!1;UBERON:0005970!5.31e-10!1;UBERON:0002437!5.31e-10!1;UBERON:0000941!7.50e-10!1;UBERON:0004904!7.50e-10!1;UBERON:0002464!7.50e-10!1;UBERON:0001021!7.50e-10!1;UBERON:0001785!7.50e-10!1;UBERON:0002104!8.03e-10!21;UBERON:0001882!2.67e-09!1;UBERON:0005403!2.67e-09!1;UBERON:0002780!5.83e-09!41;UBERON:0001890!5.83e-09!41;UBERON:0006240!5.83e-09!41;UBERON:0002680!9.24e-09!9;UBERON:0001895!9.24e-09!9;UBERON:0010092!9.24e-09!9;UBERON:0003080!9.82e-09!42;UBERON:0000063!1.22e-08!97;UBERON:0001032!1.43e-08!24;UBERON:0004456!1.43e-08!24;UBERON:0000349!1.61e-07!5;UBERON:0000019!3.32e-07!19;UBERON:0000047!3.32e-07!19;UBERON:0004088!3.32e-07!19;UBERON:0003072!3.32e-07!19;UBERON:0003071!3.32e-07!19;UBERON:0004128!3.32e-07!19;UBERON:0000970!7.51e-07!20 | |ontology_enrichment_uberon=UBERON:0005743!9.28e-35!86;UBERON:0000073!1.03e-34!94;UBERON:0001016!1.03e-34!94;UBERON:0000955!3.96e-31!69;UBERON:0006238!3.96e-31!69;UBERON:0004732!5.45e-31!13;UBERON:0001017!2.99e-29!82;UBERON:0003075!5.38e-28!86;UBERON:0007284!5.38e-28!86;UBERON:0001896!1.14e-26!3;UBERON:0005290!1.14e-26!3;UBERON:0010096!1.14e-26!3;UBERON:0002346!1.24e-26!90;UBERON:0004733!7.89e-25!12;UBERON:0002028!7.89e-25!12;UBERON:0007277!7.89e-25!12;UBERON:0000033!2.02e-23!123;UBERON:0000153!3.38e-22!129;UBERON:0007811!3.38e-22!129;UBERON:0001049!4.49e-22!57;UBERON:0005068!4.49e-22!57;UBERON:0006241!4.49e-22!57;UBERON:0007135!4.49e-22!57;UBERON:0002616!2.90e-21!59;UBERON:0004121!4.20e-20!169;UBERON:0003076!8.69e-20!15;UBERON:0003057!8.69e-20!15;UBERON:0000924!1.44e-19!173;UBERON:0006601!1.44e-19!173;UBERON:0005162!4.09e-18!2;UBERON:0000122!4.09e-18!2;UBERON:0007023!6.99e-16!115;UBERON:0000966!9.07e-16!5;UBERON:0005388!9.07e-16!5;UBERON:0001802!9.07e-16!5;UBERON:0003056!2.12e-14!61;UBERON:0002037!7.06e-13!6;UBERON:0006215!7.06e-13!6;UBERON:0001894!2.87e-11!7;UBERON:0006222!2.87e-11!7;UBERON:0002298!2.34e-10!8;UBERON:0002336!5.31e-10!1;UBERON:0001018!5.31e-10!1;UBERON:0002473!5.31e-10!1;UBERON:0005340!5.31e-10!1;UBERON:0002316!5.31e-10!1;UBERON:0003544!5.31e-10!1;UBERON:0001020!5.31e-10!1;UBERON:0005970!5.31e-10!1;UBERON:0002437!5.31e-10!1;UBERON:0000941!7.50e-10!1;UBERON:0004904!7.50e-10!1;UBERON:0002464!7.50e-10!1;UBERON:0001021!7.50e-10!1;UBERON:0001785!7.50e-10!1;UBERON:0002104!8.03e-10!21;UBERON:0001882!2.67e-09!1;UBERON:0005403!2.67e-09!1;UBERON:0002780!5.83e-09!41;UBERON:0001890!5.83e-09!41;UBERON:0006240!5.83e-09!41;UBERON:0002680!9.24e-09!9;UBERON:0001895!9.24e-09!9;UBERON:0010092!9.24e-09!9;UBERON:0003080!9.82e-09!42;UBERON:0000063!1.22e-08!97;UBERON:0001032!1.43e-08!24;UBERON:0004456!1.43e-08!24;UBERON:0000349!1.61e-07!5;UBERON:0000019!3.32e-07!19;UBERON:0000047!3.32e-07!19;UBERON:0004088!3.32e-07!19;UBERON:0003072!3.32e-07!19;UBERON:0003071!3.32e-07!19;UBERON:0004128!3.32e-07!19;UBERON:0000970!7.51e-07!20 | ||
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|short_description=p2@SLC13A4 | |short_description=p2@SLC13A4 | ||
}} | }} |
Latest revision as of 13:19, 16 September 2015
Short description: | p2@SLC13A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC13A4_5end |
Coexpression cluster: | C160_medulla_Hepatocyte_retina_corpus_liver_pineal_cerebral |
Association with transcript: | 369bp_to_ENST00000478310_5end |
EntrezGene: | SLC13A4 |
HGNC: | 15827 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 4.85e-07 | 11 |