FFCP PHASE1:Hg19::chr12:113587558..113587572,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=387885 | |EntrezGene=387885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37100 | |HGNC=37100 | ||
|TSSclassifier=strong | |||
|UniProt=A6NFT4 | |UniProt=A6NFT4 | ||
|association_with_transcript=-90bp_to_ENST00000335621,NM_001144872,uc010sys.1_5end | |association_with_transcript=-90bp_to_ENST00000335621,NM_001144872,uc010sys.1_5end | ||
|cluster_id=chr12:113587558..113587572,+ | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_2_at_CCDC42B_5end | |description=CAGE_peak_2_at_CCDC42B_5end | ||
|id=chr12:113587558..113587572,+ | |id=chr12:113587558..113587572,+ | ||
|ontology_enrichment_celltype=CL:0000453!8.06e-08!5 | |ontology_enrichment_celltype=CL:0000453!8.06e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0001014;6.05e-21;2!CL:0001016;6.05e-21;2!CL:0000453;6.07e-09;5!CL:0000840;1.36e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,7.05e-21,2;CL:0001016,7.05e-21,2;CL:0000453,6.44e-09,5;CL:0000840,1.43e-07,5;CL:0001029,1.43e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.43e-21;2!UBERON:0000358;2.82e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.61e-35!57;UBERON:0005068!6.61e-35!57;UBERON:0006241!6.61e-35!57;UBERON:0007135!6.61e-35!57;UBERON:0000955!3.18e-32!69;UBERON:0006238!3.18e-32!69;UBERON:0007023!4.58e-32!115;UBERON:0001017!4.06e-31!82;UBERON:0002616!5.11e-31!59;UBERON:0002780!7.10e-30!41;UBERON:0001890!7.10e-30!41;UBERON:0006240!7.10e-30!41;UBERON:0005743!3.45e-29!86;UBERON:0003080!5.31e-29!42;UBERON:0002020!4.75e-26!34;UBERON:0003528!4.75e-26!34;UBERON:0001893!1.41e-25!34;UBERON:0000073!1.94e-25!94;UBERON:0001016!1.94e-25!94;UBERON:0001869!1.28e-24!32;UBERON:0002791!3.61e-24!33;UBERON:0003075!1.24e-21!86;UBERON:0007284!1.24e-21!86;UBERON:0000153!1.11e-20!129;UBERON:0007811!1.11e-20!129;UBERON:0002346!2.95e-20!90;UBERON:0000033!1.75e-19!123;UBERON:0002619!5.76e-18!22;UBERON:0003056!8.02e-18!61;UBERON:0000956!1.90e-15!25;UBERON:0000203!1.90e-15!25;UBERON:0001950!1.77e-14!20;UBERON:0004121!6.15e-14!169;UBERON:0000924!2.31e-13!173;UBERON:0006601!2.31e-13!173;UBERON:0002308!4.43e-13!9;UBERON:0000125!4.43e-13!9;UBERON:0002298!6.27e-11!8;UBERON:0000369!1.08e-10!4;UBERON:0002435!1.08e-10!4;UBERON:0000204!1.08e-10!4;UBERON:0010082!1.08e-10!4;UBERON:0002420!3.34e-09!9;UBERON:0007245!3.34e-09!9;UBERON:0010009!3.34e-09!9;UBERON:0010011!3.34e-09!9;UBERON:0000454!3.34e-09!9;UBERON:0000025!3.96e-09!194;UBERON:0009663!7.99e-09!7;UBERON:0001896!9.82e-09!3;UBERON:0005290!9.82e-09!3;UBERON:0010096!9.82e-09!3;UBERON:0005383!1.90e-08!3;UBERON:0005382!1.90e-08!3;UBERON:0000349!6.49e-08!5;UBERON:0000988!7.73e-08!3;UBERON:0004111!1.37e-07!241;UBERON:0000475!1.67e-07!365;UBERON:0003076!2.73e-07!15;UBERON:0003057!2.73e-07!15;UBERON:0001872!4.70e-07!5;UBERON:0004733!5.51e-07!12;UBERON:0002028!5.51e-07!12;UBERON:0007277!5.51e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.22e-41;6!UBERON:0001896;7.75e-31;3!UBERON:0005290;7.75e-31;3!UBERON:0000125;1.18e-27;9!UBERON:0002308;1.18e-27;9!UBERON:0000369;3.98e-23;4!UBERON:0002435;3.98e-23;4!UBERON:0000204;3.98e-23;4!UBERON:0001873;2.43e-21;2!UBERON:0002148;6.05e-21;2!UBERON:0006331;6.05e-21;2!UBERON:0009662;6.05e-21;2!UBERON:0004733;7.65e-21;12!UBERON:0002028;7.65e-21;12!UBERON:0000341;2.35e-20;2!UBERON:0004732;3.08e-19;13!UBERON:0005383;1.46e-14;3!UBERON:0005382;1.46e-14;3!UBERON:0000988;2.68e-14;3!UBERON:0009663;1.74e-13;7!UBERON:0001301;1.52e-11;1!UBERON:0002336;2.82e-11;1!UBERON:0011215;2.82e-11;1!UBERON:0001018;2.82e-11;1!UBERON:0002473;2.82e-11;1!UBERON:0005340;2.82e-11;1!UBERON:0003544;2.82e-11;1!UBERON:0005970;2.82e-11;1!UBERON:0002316;2.82e-11;1!UBERON:0001020;2.82e-11;1!UBERON:0002437;2.82e-11;1!UBERON:0001882;4.67e-11;1!UBERON:0005403;4.67e-11;1!UBERON:0002420;1.30e-10;9!UBERON:0007245;1.30e-10;9!UBERON:0010009;1.30e-10;9!UBERON:0010011;1.30e-10;9!UBERON:0000454;1.30e-10;9!UBERON:0000073;4.24e-10;53!UBERON:0002616;4.24e-10;53!UBERON:0000974;2.11e-07;6!UBERON:0001017;7.34e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,9.47e-42,6;UBERON:0001896,6.66e-31,3;UBERON:0005290,6.66e-31,3;UBERON:0010096,6.66e-31,3;UBERON:0000125,1.15e-27,9;UBERON:0002308,1.15e-27,9;UBERON:0003076,1.47e-23,15;UBERON:0003057,1.47e-23,15;UBERON:0000369,4.29e-23,4;UBERON:0002435,4.29e-23,4;UBERON:0000204,4.29e-23,4;UBERON:0010082,4.29e-23,4;UBERON:0001873,2.55e-21,2;UBERON:0010122,2.55e-21,2;UBERON:0002148,5.20e-21,2;UBERON:0006331,5.20e-21,2;UBERON:0009662,5.20e-21,2;UBERON:0004733,6.76e-21,12;UBERON:0002028,6.76e-21,12;UBERON:0007277,6.76e-21,12;UBERON:0000341,2.12e-20,2;UBERON:0004732,2.75e-19,13;UBERON:0001049,4.40e-16,56;UBERON:0005068,4.40e-16,56;UBERON:0006241,4.40e-16,56;UBERON:0007135,4.40e-16,56;UBERON:0005383,1.51e-14,3;UBERON:0005382,1.51e-14,3;UBERON:0000988,2.42e-14,3;UBERON:0000073,7.57e-14,53;UBERON:0002616,7.57e-14,53;UBERON:0009663,1.81e-13,7;UBERON:0007023,8.22e-13,114;UBERON:0001301,1.45e-11,1;UBERON:0002336,2.42e-11,1;UBERON:0011215,2.42e-11,1;UBERON:0001018,2.42e-11,1;UBERON:0002473,2.42e-11,1;UBERON:0005340,2.42e-11,1;UBERON:0003544,2.42e-11,1;UBERON:0005970,2.42e-11,1;UBERON:0002316,2.42e-11,1;UBERON:0001020,2.42e-11,1;UBERON:0002437,2.42e-11,1;UBERON:0001882,4.91e-11,1;UBERON:0005403,4.91e-11,1;UBERON:0001017,1.33e-10,81;UBERON:0003075,1.33e-10,82;UBERON:0007284,1.33e-10,82;UBERON:0002420,1.34e-10,9;UBERON:0007245,1.34e-10,9;UBERON:0010009,1.34e-10,9;UBERON:0010011,1.34e-10,9;UBERON:0000454,1.34e-10,9;UBERON:0000955,2.08e-10,68;UBERON:0006238,2.08e-10,68;UBERON:0002346,4.77e-10,86;UBERON:0001016,2.01e-09,89;UBERON:0010371,4.44e-08,104;UBERON:0003528,4.83e-07,34;UBERON:0002020,4.83e-07,34 | |||
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|short_description=p2@CCDC42B | |short_description=p2@CCDC42B | ||
}} | }} |
Latest revision as of 12:10, 16 September 2015
Short description: | p2@CCDC42B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCDC42B_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | -90bp_to_ENST00000335621, NM_001144872, uc010sys.1_5end |
EntrezGene: | CCDC42B |
HGNC: | 37100 |
UniProt: | A6NFT4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 7.05e-21 | 2 |
immature CD1a-positive Langerhans cell | 7.05e-21 | 2 |
Langerhans cell | 6.44e-09 | 5 |
immature conventional dendritic cell | 1.43e-07 | 5 |
common dendritic progenitor | 1.43e-07 | 5 |