FFCP PHASE1:Hg19::chr9:139249228..139249250,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26086 | |EntrezGene=26086 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17858 | |HGNC=17858 | ||
|TSSclassifier=strong | |||
|UniProt=Q86YR5 | |UniProt=Q86YR5 | ||
|association_with_transcript=-1bp_to_NM_001200003_5end | |||
|cluster_id=chr9:139249228..139249250,+ | |||
|description=CAGE_peak_5_at_GPSM1_5end | |||
|id=chr9:139249228..139249250,+ | |||
|ontology_enrichment_celltype=CL:0002537!3.08e-10!5 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.05e-42;19!CL:0002537;8.88e-42;5!CL:0002195;2.22e-17;2!CL:0002571;2.22e-17;2!CL:0002579;3.66e-12;3!CL:0000134;4.59e-12;55!CL:0002541;6.58e-12;3!CL:0000048;2.91e-10;58!CL:0002581;6.04e-10;1!CL:0002591;1.48e-09;1!CL:0000723;2.37e-09;61!CL:0000034;5.66e-08;69!CL:0002334;7.04e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.87e-42,19;CL:0002537,1.48e-41,5;CL:0002195,1.04e-17,2;CL:0002571,1.04e-17,2;CL:0002579,4.99e-12,3;CL:0002541,5.58e-12,3;CL:0002581,4.87e-10,1;CL:0002591,1.76e-09,1;CL:0002334,7.48e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.48e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!7.67e-21!14;UBERON:0000158!7.67e-21!14;UBERON:0000478!3.36e-14!24;UBERON:0000305!4.77e-13!7;UBERON:0004923!1.09e-11!57;UBERON:0004871!3.19e-11!8;UBERON:0003124!1.35e-09!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;5.55e-52;10!UBERON:0000158;5.55e-52;10!UBERON:0000305;1.89e-42;7!UBERON:0000478;3.16e-40;24!UBERON:0003124;6.58e-12;3!UBERON:0000920;6.58e-12;3!UBERON:0001987;2.41e-09;4!UBERON:0004923;4.66e-08;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.02e-57,14;UBERON:0000158,2.02e-57,14;UBERON:0000305,4.50e-42,7;UBERON:0000478,4.39e-40,24;UBERON:0004871,8.81e-37,8;UBERON:0003124,2.98e-19,7;UBERON:0004923,4.98e-16,66;UBERON:0000920,5.58e-12,3;UBERON:0001987,2.36e-09,4;UBERON:0004340,2.36e-09,4 | |||
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| ||
|short_description=p5@GPSM1 | |||
}} | }} |
Latest revision as of 11:47, 16 September 2015
Short description: | p5@GPSM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GPSM1_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_NM_001200003_5end |
EntrezGene: | GPSM1 |
HGNC: | 17858 |
UniProt: | Q86YR5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.87e-42 | 19 |
amnion mesenchymal stem cell | 1.48e-41 | 5 |
hepatic stem cell | 1.04e-17 | 2 |
hepatic mesenchymal stem cell | 1.04e-17 | 2 |
omentum preadipocyte | 4.99e-12 | 3 |
chorionic membrane mesenchymal stem cell | 5.58e-12 | 3 |
perirenal preadipocyte | 4.87e-10 | 1 |
smooth muscle cell of the pulmonary artery | 1.76e-09 | 1 |
preadipocyte | 7.48e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.02e-57 | 14 |
membranous layer | 2.02e-57 | 14 |
amnion | 4.50e-42 | 7 |
extraembryonic structure | 4.39e-40 | 24 |
somatic layer of lateral plate mesoderm | 8.81e-37 | 8 |
chorion | 2.98e-19 | 7 |
organ component layer | 4.98e-16 | 66 |
egg chorion | 5.58e-12 | 3 |
placenta | 2.36e-09 | 4 |
allantois | 2.36e-09 | 4 |