FFCP PHASE1:Hg19::chr6:158438251..158438271,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8871 | |EntrezGene=8871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11504 | |HGNC=11504 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=78bp_to_uc003qqy.1_5end | |association_with_transcript=78bp_to_uc003qqy.1_5end | ||
|cluster_id=chr6:158438251..158438271,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_SYNJ2_5end | |description=CAGE_peak_3_at_SYNJ2_5end | ||
|id=chr6:158438251..158438271,+ | |id=chr6:158438251..158438271,+ | ||
|ontology_enrichment_celltype=CL:0002139!2.96e-09!24;CL:0005020!2.61e-07!6;CL:0002138!2.61e-07!6;CL:0005022!2.61e-07!6 | |ontology_enrichment_celltype=CL:0002139!2.96e-09!24;CL:0005020!2.61e-07!6;CL:0002138!2.61e-07!6;CL:0005022!2.61e-07!6 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.45e-21;82!UBERON:0006241;2.14e-09;3!UBERON:0003057;2.14e-09;3!UBERON:0005425;4.27e-08;1!UBERON:0006222;1.79e-07;1!UBERON:0002532;8.37e-07;206!UBERON:0010316;8.37e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.98e-38!57;UBERON:0005068!6.98e-38!57;UBERON:0006241!6.98e-38!57;UBERON:0007135!6.98e-38!57;UBERON:0001017!4.07e-37!82;UBERON:0005743!1.01e-34!86;UBERON:0003075!3.28e-34!86;UBERON:0007284!3.28e-34!86;UBERON:0002346!1.69e-33!90;UBERON:0000073!2.23e-33!94;UBERON:0001016!2.23e-33!94;UBERON:0000955!1.99e-32!69;UBERON:0006238!1.99e-32!69;UBERON:0002616!1.01e-31!59;UBERON:0002780!7.03e-31!41;UBERON:0001890!7.03e-31!41;UBERON:0006240!7.03e-31!41;UBERON:0001893!7.47e-31!34;UBERON:0002020!1.22e-30!34;UBERON:0003528!1.22e-30!34;UBERON:0003080!6.24e-30!42;UBERON:0002791!3.54e-29!33;UBERON:0007023!7.93e-28!115;UBERON:0001869!1.15e-27!32;UBERON:0003056!6.10e-27!61;UBERON:0002619!9.69e-27!22;UBERON:0000956!2.20e-25!25;UBERON:0000203!2.20e-25!25;UBERON:0001950!9.28e-24!20;UBERON:0000033!3.98e-23!123;UBERON:0000153!1.88e-22!129;UBERON:0007811!1.88e-22!129;UBERON:0004121!9.91e-22!169;UBERON:0000924!1.01e-21!173;UBERON:0006601!1.01e-21!173;UBERON:0004111!1.74e-16!241;UBERON:0000477!6.04e-15!286;UBERON:0000025!2.28e-14!194;UBERON:0000119!1.31e-11!312;UBERON:0002298!1.58e-11!8;UBERON:0000483!2.30e-11!309;UBERON:0002021!8.47e-10!5;UBERON:0000349!1.53e-09!5;UBERON:0000475!3.01e-09!365;UBERON:0003076!4.87e-09!15;UBERON:0003057!4.87e-09!15;UBERON:0000467!6.65e-09!625;UBERON:0000480!7.60e-09!626;UBERON:0001871!1.10e-08!7;UBERON:0000200!1.33e-08!6;UBERON:0004732!1.63e-08!13;UBERON:0000468!5.82e-08!659;UBERON:0000064!2.96e-07!219;UBERON:0004733!4.50e-07!12;UBERON:0002028!4.50e-07!12;UBERON:0007277!4.50e-07!12;UBERON:0001872!6.16e-07!5;UBERON:0002420!6.25e-07!9;UBERON:0007245!6.25e-07!9;UBERON:0010009!6.25e-07!9;UBERON:0010011!6.25e-07!9;UBERON:0000454!6.25e-07!9;UBERON:0002308!7.05e-07!9;UBERON:0000125!7.05e-07!9;UBERON:0002771!7.89e-07!3;UBERON:0000488!9.45e-07!4 | |ontology_enrichment_uberon=UBERON:0001049!6.98e-38!57;UBERON:0005068!6.98e-38!57;UBERON:0006241!6.98e-38!57;UBERON:0007135!6.98e-38!57;UBERON:0001017!4.07e-37!82;UBERON:0005743!1.01e-34!86;UBERON:0003075!3.28e-34!86;UBERON:0007284!3.28e-34!86;UBERON:0002346!1.69e-33!90;UBERON:0000073!2.23e-33!94;UBERON:0001016!2.23e-33!94;UBERON:0000955!1.99e-32!69;UBERON:0006238!1.99e-32!69;UBERON:0002616!1.01e-31!59;UBERON:0002780!7.03e-31!41;UBERON:0001890!7.03e-31!41;UBERON:0006240!7.03e-31!41;UBERON:0001893!7.47e-31!34;UBERON:0002020!1.22e-30!34;UBERON:0003528!1.22e-30!34;UBERON:0003080!6.24e-30!42;UBERON:0002791!3.54e-29!33;UBERON:0007023!7.93e-28!115;UBERON:0001869!1.15e-27!32;UBERON:0003056!6.10e-27!61;UBERON:0002619!9.69e-27!22;UBERON:0000956!2.20e-25!25;UBERON:0000203!2.20e-25!25;UBERON:0001950!9.28e-24!20;UBERON:0000033!3.98e-23!123;UBERON:0000153!1.88e-22!129;UBERON:0007811!1.88e-22!129;UBERON:0004121!9.91e-22!169;UBERON:0000924!1.01e-21!173;UBERON:0006601!1.01e-21!173;UBERON:0004111!1.74e-16!241;UBERON:0000477!6.04e-15!286;UBERON:0000025!2.28e-14!194;UBERON:0000119!1.31e-11!312;UBERON:0002298!1.58e-11!8;UBERON:0000483!2.30e-11!309;UBERON:0002021!8.47e-10!5;UBERON:0000349!1.53e-09!5;UBERON:0000475!3.01e-09!365;UBERON:0003076!4.87e-09!15;UBERON:0003057!4.87e-09!15;UBERON:0000467!6.65e-09!625;UBERON:0000480!7.60e-09!626;UBERON:0001871!1.10e-08!7;UBERON:0000200!1.33e-08!6;UBERON:0004732!1.63e-08!13;UBERON:0000468!5.82e-08!659;UBERON:0000064!2.96e-07!219;UBERON:0004733!4.50e-07!12;UBERON:0002028!4.50e-07!12;UBERON:0007277!4.50e-07!12;UBERON:0001872!6.16e-07!5;UBERON:0002420!6.25e-07!9;UBERON:0007245!6.25e-07!9;UBERON:0010009!6.25e-07!9;UBERON:0010011!6.25e-07!9;UBERON:0000454!6.25e-07!9;UBERON:0002308!7.05e-07!9;UBERON:0000125!7.05e-07!9;UBERON:0002771!7.89e-07!3;UBERON:0000488!9.45e-07!4 | ||
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| ||
|short_description=p3@SYNJ2 | |short_description=p3@SYNJ2 | ||
}} | }} |
Latest revision as of 11:13, 16 September 2015
Short description: | p3@SYNJ2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SYNJ2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 78bp_to_uc003qqy.1_5end |
EntrezGene: | SYNJ2 |
HGNC: | 11504 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data