FFCP PHASE1:Hg19::chr8:133687814..133687844,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:133687814..133687844,- to FFCP PHASE1:Hg19::chr8:133687814..133687844,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23639 | |EntrezGene=23639 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16725 | |HGNC=16725 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000518101,ENST00000519595,ENST00000520446_5end | |||
|cluster_id=chr8:133687814..133687844,- | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_3_at_LRRC6_5end | |||
|id=chr8:133687814..133687844,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.07e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.14e-23!57;UBERON:0005068!1.14e-23!57;UBERON:0006241!1.14e-23!57;UBERON:0007135!1.14e-23!57;UBERON:0002616!4.06e-21!59;UBERON:0002780!1.95e-20!41;UBERON:0001890!1.95e-20!41;UBERON:0006240!1.95e-20!41;UBERON:0005743!3.00e-20!86;UBERON:0001017!3.46e-20!82;UBERON:0002346!3.47e-20!90;UBERON:0000073!1.12e-19!94;UBERON:0001016!1.12e-19!94;UBERON:0000955!1.63e-19!69;UBERON:0006238!1.63e-19!69;UBERON:0003080!1.78e-19!42;UBERON:0003075!9.23e-19!86;UBERON:0007284!9.23e-19!86;UBERON:0002020!2.06e-16!34;UBERON:0003528!2.06e-16!34;UBERON:0001893!3.21e-16!34;UBERON:0007023!8.72e-16!115;UBERON:0002791!1.13e-15!33;UBERON:0001869!1.59e-15!32;UBERON:0003056!6.16e-15!61;UBERON:0000924!2.07e-13!173;UBERON:0006601!2.07e-13!173;UBERON:0000153!2.33e-13!129;UBERON:0007811!2.33e-13!129;UBERON:0000033!4.00e-13!123;UBERON:0004121!2.54e-12!169;UBERON:0000956!2.36e-11!25;UBERON:0000203!2.36e-11!25;UBERON:0002619!1.23e-10!22;UBERON:0001950!2.34e-09!20;UBERON:0000062!1.91e-08!511;UBERON:0000468!2.60e-07!659;UBERON:0000475!4.87e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.95e-29;41!UBERON:0001890;4.95e-29;41!UBERON:0003528;1.66e-28;34!UBERON:0002020;1.66e-28;34!UBERON:0001893;7.22e-28;34!UBERON:0001869;2.84e-27;32!UBERON:0002791;2.80e-25;32!UBERON:0000073;7.56e-25;53!UBERON:0002616;7.56e-25;53!UBERON:0002619;8.47e-25;22!UBERON:0000956;6.06e-24;25!UBERON:0000203;6.06e-24;25!UBERON:0001950;2.25e-21;20!UBERON:0000955;1.46e-14;68!UBERON:0001017;1.36e-13;75!UBERON:0001894;1.06e-10;7!UBERON:0001872;2.27e-10;5!UBERON:0001016;2.38e-10;83!UBERON:0000369;2.81e-10;4!UBERON:0002435;2.81e-10;4!UBERON:0000204;2.81e-10;4!UBERON:0002298;7.34e-10;6!UBERON:0000125;2.71e-09;9!UBERON:0002308;2.71e-09;9!UBERON:0007023;5.50e-09;114!UBERON:0005383;2.92e-08;3!UBERON:0005382;2.92e-08;3!UBERON:0000200;3.55e-08;6!UBERON:0001896;9.02e-08;3!UBERON:0005290;9.02e-08;3!UBERON:0001871;2.75e-07;6!UBERON:0000349;3.68e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.64e-43,53;UBERON:0002616,4.64e-43,53;UBERON:0001049,8.79e-43,56;UBERON:0005068,8.79e-43,56;UBERON:0006241,8.79e-43,56;UBERON:0007135,8.79e-43,56;UBERON:0002780,2.60e-41,41;UBERON:0001890,2.60e-41,41;UBERON:0003080,2.60e-41,41;UBERON:0006240,2.60e-41,41;UBERON:0000955,1.18e-34,68;UBERON:0006238,1.18e-34,68;UBERON:0003528,1.72e-32,34;UBERON:0002020,1.72e-32,34;UBERON:0001893,5.09e-32,34;UBERON:0001869,2.36e-31,32;UBERON:0001017,3.25e-29,81;UBERON:0002346,7.86e-29,86;UBERON:0002791,9.55e-29,32;UBERON:0001016,1.08e-28,89;UBERON:0007023,3.98e-28,114;UBERON:0003075,1.98e-27,82;UBERON:0007284,1.98e-27,82;UBERON:0002619,2.22e-25,22;UBERON:0003056,6.14e-25,61;UBERON:0000956,1.69e-24,25;UBERON:0000203,1.69e-24,25;UBERON:0001950,8.34e-22,20;UBERON:0010371,1.39e-20,104;UBERON:0010314,3.85e-18,132;UBERON:0000025,1.40e-16,192;UBERON:0011216,1.61e-14,223;UBERON:0004121,1.39e-13,171;UBERON:0000924,1.39e-13,171;UBERON:0006601,1.39e-13,171;UBERON:0004111,6.79e-12,240;UBERON:0001894,7.51e-11,7;UBERON:0006222,7.51e-11,7;UBERON:0001872,1.54e-10,5;UBERON:0000369,2.39e-10,4;UBERON:0002435,2.39e-10,4;UBERON:0000204,2.39e-10,4;UBERON:0010082,2.39e-10,4;UBERON:0002298,5.44e-10,6;UBERON:0000125,2.29e-09,9;UBERON:0002308,2.29e-09,9;UBERON:0000483,5.32e-09,306;UBERON:0000119,8.84e-09,309;UBERON:0000200,2.47e-08,6;UBERON:0005383,3.04e-08,3;UBERON:0005382,3.04e-08,3;UBERON:0001896,6.92e-08,3;UBERON:0005290,6.92e-08,3;UBERON:0010096,6.92e-08,3;UBERON:0000349,1.62e-07,5;UBERON:0001871,2.22e-07,6 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.422863212287913,2.00146596706261,0,0,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0,1.43117993565528,0.136874425072884,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0.671746422719773,0.32389366601898,1.03030227053675,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0,0,0.289693037921647,0.795285947051099,0.486634870302636,0.378139268656271,0.221729397462564,0.175669571386252,2.81605012320082,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,1.42306505074684,0.33472061276467,0,0,0.24406205754817,0,1.62028389576352,0.357198913136319,0.673588117878509,0,1.53316637465883,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0.286836620748814,0,0,0,0.24666754841716,0.622422070799533,0.134710672069688,0.490385709340376,0,0.576175924479999,0.234321431833797,0,0,0,1.05691048779388,0,0.140450806702248,0.408308342509787,0.245668634623536,0.413303124703062,0,0.247266929278557,0,0,0.505008341862199,0.125118519871964,0.277064115484183,0,0.30648779579902,0.600952235626387,0,0.358779271377724,0.427114777637135,0.211931901159562,0.300091096084402,0.206105058476878,0.515281080091258,0.18611685633159,0.506328996723799,0.292311015483596,0.252433774244115,0.0920498986422993,1.13152239773168,0.355009592516614,0.302256294682921,0.169560592310488,0.193260853163297,0,0,0.243947412259191,0.132529768321485,0,0.621966330092223,0.252320850875628,0,0,0.643240938192885,0,0.464367928031979,0,0.236613600079688,0,0,0.330881918197182,0,0.237270619111097,0.134831308160164,0,0.38474715694639,0,0,0,0,1.26755034821831,0,0,0.441463099414651,0,0.171567810298526,0.109750285408626,0,0.100528972411631,0.555530670951178,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0,0.462985512576611,0,0,0,0.492434012174795,0,0.594524649154913,0,0.335964256397719,0.425325291727159,0.0895585227028483,0,0,0,0.088048434013226,0,0.432359860250884,0.12624243342638,0.952468414382536,0.381988425558278,0,0,0.514137463516618,0,0.857479297891735,0.224262168690721,0,0.22001485746285,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0.65147236858747,0.355391948742546,0,0.602878754119172,0,0.899756920638513,0,0,2.10833939483032,0,0,0,0.434343920002738,0,0.358121926479791,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,0.736148950314839,0.500170521059677,0.271265023699736,0,0,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0,0.260650843404249,0,0,0,0,0.106727557803444,0,0,0.30239029332968,0,0,0.280660094433074,0.384417447767103,0,0.321707842287215,0,0,0,0.246381468041427,0.519254429183621,0.116210378459959,0.120859449591622,0.802025881213139,0.0920809889358963,0,0,0,0,0.15403067420883,0,0,0.211103257785751,0,0.340187410553031,0.215915916102139,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0,0.618246069886334,0.0915694648183434,0,1.14853107599234,0,0,0.096670718292122,0,0,0,0.322260734604821,0.145016693914229,0.170453254832202,0,0.165284915360978,0.192190067365106,0.255225424989168,0.30347334256665,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0.316379424718726,0.38126038784765,0,0,0,0,0,0,0.235624804691373,0,0,0,0.48763373908959,0.243713489631284,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.844430541190656,1.31717957183961,0,0,0.0962221127255121,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,0,0.490080431962063,0,0,0,0.318852545457645,0,0,0.211673582723883,0,0,0,0.156679895773023,0,0.677167111206413,0,0,0.425846237690326,0,0.307240764308458,0,0.333698283423817,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0.242721043499027,0,0.568272293612826,0.47748896947538,0.593929361665277,1.22864280839693,0,1.68803299692615,0,0,0.422250816255987,1.39473591775749,0.552567831062295,0,0,0,0.311039587661807,0,0,0.511572370226872,0.493217028184668,0,0,1.93866549219044,1.11321717794222,0,0,0.349839999984783,0,0.455173793141999,0,0.236387681767936,1.72371686620732,0.874813840149763,0.347249989866585,6.20018970069687,6.51220768577203,0,0.663475559587348,0.591095237907095,0.87754158861589,0,0,0.461701551022782,0.569710279235006,0,0.269272933229316,0,0,0.183195186803725,0,0,0,0.664846727600626,0,0,0,0,0.158936578980379,0.843992258112108,2.61172493054636,0,0.216388639742091,0,0.442287822516696,0.611030144933625,0.296521128680622,0,0.104421949505455,2.3590396543237,0.802577647298789,2.34264445725339,0,0,0,0,0,3.0607276163049,0.379119477770928,0.300646838828985,0,0,0.330991955875499,0.627865836814451,0,0.853828638089378,0,0.173559738335131,0.489961987071888,0,4.01871336956669,0,0,0,0,0.387956065953678,0,0.451961481561065,0,0.397429223405979,1.64608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|short_description=p3@LRRC6 | |||
}} | }} |
Latest revision as of 10:57, 16 September 2015
Short description: | p3@LRRC6 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LRRC6_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 0bp_to_ENST00000518101, ENST00000519595, ENST00000520446_5end |
EntrezGene: | LRRC6 |
HGNC: | 16725 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data