FFCP PHASE1:Hg19::chr8:133687814..133687844,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23639 | |EntrezGene=23639 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16725 | |HGNC=16725 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000518101,ENST00000519595,ENST00000520446_5end | |association_with_transcript=0bp_to_ENST00000518101,ENST00000519595,ENST00000520446_5end | ||
|cluster_id=chr8:133687814..133687844,- | |||
|coexpression_cluster_id=C111 | |coexpression_cluster_id=C111 | ||
|description=CAGE_peak_3_at_LRRC6_5end | |description=CAGE_peak_3_at_LRRC6_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.07e-08;82 | |ontology_enrichment_development_v019=UBERON:0006601;1.07e-08;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.14e-23!57;UBERON:0005068!1.14e-23!57;UBERON:0006241!1.14e-23!57;UBERON:0007135!1.14e-23!57;UBERON:0002616!4.06e-21!59;UBERON:0002780!1.95e-20!41;UBERON:0001890!1.95e-20!41;UBERON:0006240!1.95e-20!41;UBERON:0005743!3.00e-20!86;UBERON:0001017!3.46e-20!82;UBERON:0002346!3.47e-20!90;UBERON:0000073!1.12e-19!94;UBERON:0001016!1.12e-19!94;UBERON:0000955!1.63e-19!69;UBERON:0006238!1.63e-19!69;UBERON:0003080!1.78e-19!42;UBERON:0003075!9.23e-19!86;UBERON:0007284!9.23e-19!86;UBERON:0002020!2.06e-16!34;UBERON:0003528!2.06e-16!34;UBERON:0001893!3.21e-16!34;UBERON:0007023!8.72e-16!115;UBERON:0002791!1.13e-15!33;UBERON:0001869!1.59e-15!32;UBERON:0003056!6.16e-15!61;UBERON:0000924!2.07e-13!173;UBERON:0006601!2.07e-13!173;UBERON:0000153!2.33e-13!129;UBERON:0007811!2.33e-13!129;UBERON:0000033!4.00e-13!123;UBERON:0004121!2.54e-12!169;UBERON:0000956!2.36e-11!25;UBERON:0000203!2.36e-11!25;UBERON:0002619!1.23e-10!22;UBERON:0001950!2.34e-09!20;UBERON:0000062!1.91e-08!511;UBERON:0000468!2.60e-07!659;UBERON:0000475!4.87e-07!365 | |ontology_enrichment_uberon=UBERON:0001049!1.14e-23!57;UBERON:0005068!1.14e-23!57;UBERON:0006241!1.14e-23!57;UBERON:0007135!1.14e-23!57;UBERON:0002616!4.06e-21!59;UBERON:0002780!1.95e-20!41;UBERON:0001890!1.95e-20!41;UBERON:0006240!1.95e-20!41;UBERON:0005743!3.00e-20!86;UBERON:0001017!3.46e-20!82;UBERON:0002346!3.47e-20!90;UBERON:0000073!1.12e-19!94;UBERON:0001016!1.12e-19!94;UBERON:0000955!1.63e-19!69;UBERON:0006238!1.63e-19!69;UBERON:0003080!1.78e-19!42;UBERON:0003075!9.23e-19!86;UBERON:0007284!9.23e-19!86;UBERON:0002020!2.06e-16!34;UBERON:0003528!2.06e-16!34;UBERON:0001893!3.21e-16!34;UBERON:0007023!8.72e-16!115;UBERON:0002791!1.13e-15!33;UBERON:0001869!1.59e-15!32;UBERON:0003056!6.16e-15!61;UBERON:0000924!2.07e-13!173;UBERON:0006601!2.07e-13!173;UBERON:0000153!2.33e-13!129;UBERON:0007811!2.33e-13!129;UBERON:0000033!4.00e-13!123;UBERON:0004121!2.54e-12!169;UBERON:0000956!2.36e-11!25;UBERON:0000203!2.36e-11!25;UBERON:0002619!1.23e-10!22;UBERON:0001950!2.34e-09!20;UBERON:0000062!1.91e-08!511;UBERON:0000468!2.60e-07!659;UBERON:0000475!4.87e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.95e-29;41!UBERON:0001890;4.95e-29;41!UBERON:0003528;1.66e-28;34!UBERON:0002020;1.66e-28;34!UBERON:0001893;7.22e-28;34!UBERON:0001869;2.84e-27;32!UBERON:0002791;2.80e-25;32!UBERON:0000073;7.56e-25;53!UBERON:0002616;7.56e-25;53!UBERON:0002619;8.47e-25;22!UBERON:0000956;6.06e-24;25!UBERON:0000203;6.06e-24;25!UBERON:0001950;2.25e-21;20!UBERON:0000955;1.46e-14;68!UBERON:0001017;1.36e-13;75!UBERON:0001894;1.06e-10;7!UBERON:0001872;2.27e-10;5!UBERON:0001016;2.38e-10;83!UBERON:0000369;2.81e-10;4!UBERON:0002435;2.81e-10;4!UBERON:0000204;2.81e-10;4!UBERON:0002298;7.34e-10;6!UBERON:0000125;2.71e-09;9!UBERON:0002308;2.71e-09;9!UBERON:0007023;5.50e-09;114!UBERON:0005383;2.92e-08;3!UBERON:0005382;2.92e-08;3!UBERON:0000200;3.55e-08;6!UBERON:0001896;9.02e-08;3!UBERON:0005290;9.02e-08;3!UBERON:0001871;2.75e-07;6!UBERON:0000349;3.68e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0002780;4.95e-29;41!UBERON:0001890;4.95e-29;41!UBERON:0003528;1.66e-28;34!UBERON:0002020;1.66e-28;34!UBERON:0001893;7.22e-28;34!UBERON:0001869;2.84e-27;32!UBERON:0002791;2.80e-25;32!UBERON:0000073;7.56e-25;53!UBERON:0002616;7.56e-25;53!UBERON:0002619;8.47e-25;22!UBERON:0000956;6.06e-24;25!UBERON:0000203;6.06e-24;25!UBERON:0001950;2.25e-21;20!UBERON:0000955;1.46e-14;68!UBERON:0001017;1.36e-13;75!UBERON:0001894;1.06e-10;7!UBERON:0001872;2.27e-10;5!UBERON:0001016;2.38e-10;83!UBERON:0000369;2.81e-10;4!UBERON:0002435;2.81e-10;4!UBERON:0000204;2.81e-10;4!UBERON:0002298;7.34e-10;6!UBERON:0000125;2.71e-09;9!UBERON:0002308;2.71e-09;9!UBERON:0007023;5.50e-09;114!UBERON:0005383;2.92e-08;3!UBERON:0005382;2.92e-08;3!UBERON:0000200;3.55e-08;6!UBERON:0001896;9.02e-08;3!UBERON:0005290;9.02e-08;3!UBERON:0001871;2.75e-07;6!UBERON:0000349;3.68e-07;5 | ||
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| ||
|short_description=p3@LRRC6 | |short_description=p3@LRRC6 | ||
}} | }} |
Latest revision as of 10:57, 16 September 2015
Short description: | p3@LRRC6 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LRRC6_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 0bp_to_ENST00000518101, ENST00000519595, ENST00000520446_5end |
EntrezGene: | LRRC6 |
HGNC: | 16725 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data