FFCP PHASE1:Hg19::chr17:56406117..56406165,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:56406117..56406165,-
|short_description=p1@BZRAP1
|description=CAGE_peak_1_at_BZRAP1_5end
|association_with_transcript=0bp_to_ENST00000268893,ENST00000343...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9256 | |EntrezGene=9256 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16831 | |HGNC=16831 | ||
|TSSclassifier=strong | |||
|UniProt=O95153,A7E2C5 | |UniProt=O95153,A7E2C5 | ||
|association_with_transcript=0bp_to_ENST00000268893,ENST00000343736,ENST00000355701,NM_004758,NM_024418,uc002ivx.3,uc010dcs.2,uc010wnt.1_5end | |||
|cluster_id=chr17:56406117..56406165,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_BZRAP1_5end | |||
|id=chr17:56406117..56406165,- | |||
|ontology_enrichment_celltype=CL:0000542!3.58e-17!53;CL:0000051!3.58e-17!53;CL:0000838!5.05e-17!52;CL:0000037!2.39e-13!172;CL:0000566!2.39e-13!172;CL:0000988!1.61e-12!182;CL:0000084!3.43e-12!25;CL:0000827!3.43e-12!25;CL:0002032!9.17e-12!165;CL:0000837!9.17e-12!165;CL:0000791!1.41e-10!18;CL:0000789!1.41e-10!18;CL:0002420!1.41e-10!18;CL:0002419!1.41e-10!18;CL:0000790!1.41e-10!18;CL:0000738!5.90e-09!140;CL:0002087!5.74e-08!119;CL:0000625!8.76e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000084;2.51e-12;25!CL:0000791;1.52e-11;18!CL:0000789;1.52e-11;18!CL:0002419;1.52e-11;18!CL:0000625;2.16e-10;11!CL:0000542;4.42e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.96e-13,52;CL:0000084,1.26e-12,25;CL:0000827,1.26e-12,25;CL:0000542,1.30e-12,53;CL:0000051,1.30e-12,53;CL:0000791,8.34e-12,18;CL:0000789,8.34e-12,18;CL:0002420,8.34e-12,18;CL:0002419,8.34e-12,18;CL:0000790,8.34e-12,18;CL:0000625,1.67e-10,11;CL:0000037,2.05e-08,168;CL:0000988,1.08e-07,177;CL:0002032,9.85e-07,161;CL:0000837,9.85e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;1.52e-11;18!UBERON:0006601;8.17e-11;82!CL:0000051;4.42e-07;53 | |||
|ontology_enrichment_disease=DOID:2531!6.16e-07!51;DOID:0060083!6.16e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.80e-46!115;UBERON:0001049!3.62e-37!57;UBERON:0005068!3.62e-37!57;UBERON:0006241!3.62e-37!57;UBERON:0007135!3.62e-37!57;UBERON:0001017!1.58e-34!82;UBERON:0005743!7.55e-33!86;UBERON:0000073!1.23e-31!94;UBERON:0001016!1.23e-31!94;UBERON:0002616!4.87e-31!59;UBERON:0002780!1.54e-30!41;UBERON:0001890!1.54e-30!41;UBERON:0006240!1.54e-30!41;UBERON:0003080!2.22e-29!42;UBERON:0000955!7.18e-28!69;UBERON:0006238!7.18e-28!69;UBERON:0002020!2.60e-26!34;UBERON:0003528!2.60e-26!34;UBERON:0001893!2.88e-26!34;UBERON:0002791!2.00e-25!33;UBERON:0001869!8.23e-25!32;UBERON:0003075!1.47e-22!86;UBERON:0007284!1.47e-22!86;UBERON:0002346!1.69e-20!90;UBERON:0002619!8.51e-20!22;UBERON:0000956!1.02e-18!25;UBERON:0000203!1.02e-18!25;UBERON:0003056!1.21e-18!61;UBERON:0001950!6.10e-18!20;UBERON:0000153!7.29e-14!129;UBERON:0007811!7.29e-14!129;UBERON:0000033!1.42e-11!123;UBERON:0004121!1.96e-10!169;UBERON:0000178!7.76e-10!15;UBERON:0000179!7.76e-10!15;UBERON:0000463!7.76e-10!15;UBERON:0000924!1.17e-09!173;UBERON:0006601!1.17e-09!173;UBERON:0002420!2.16e-09!9;UBERON:0007245!2.16e-09!9;UBERON:0010009!2.16e-09!9;UBERON:0010011!2.16e-09!9;UBERON:0000454!2.16e-09!9;UBERON:0002308!4.38e-09!9;UBERON:0000125!4.38e-09!9;UBERON:0003076!6.89e-09!15;UBERON:0003057!6.89e-09!15;UBERON:0009663!1.66e-07!7;UBERON:0004732!2.16e-07!13;UBERON:0000200!6.66e-07!6;UBERON:0004733!9.81e-07!12;UBERON:0002028!9.81e-07!12;UBERON:0007277!9.81e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.00e-29;34!UBERON:0003528;2.79e-29;34!UBERON:0002020;2.79e-29;34!UBERON:0001869;5.80e-29;32!UBERON:0002791;7.66e-29;32!UBERON:0002619;4.09e-28;22!UBERON:0002780;4.15e-28;41!UBERON:0001890;4.15e-28;41!UBERON:0000073;4.34e-26;53!UBERON:0002616;4.34e-26;53!UBERON:0001950;1.91e-25;20!UBERON:0000956;7.32e-24;25!UBERON:0000203;7.32e-24;25!UBERON:0001017;5.28e-18;75!UBERON:0000955;1.19e-17;68!UBERON:0001016;7.02e-16;83!UBERON:0002420;8.31e-13;9!UBERON:0007245;8.31e-13;9!UBERON:0010009;8.31e-13;9!UBERON:0010011;8.31e-13;9!UBERON:0000454;8.31e-13;9!UBERON:0000125;2.28e-12;9!UBERON:0002308;2.28e-12;9!UBERON:0007023;1.05e-11;114!UBERON:0000178;1.12e-10;15!UBERON:0000179;1.12e-10;15!UBERON:0000463;1.12e-10;15!UBERON:0009663;4.18e-10;7!UBERON:0000200;3.06e-09;6!UBERON:0004732;3.46e-09;13!UBERON:0000349;2.87e-08;5!UBERON:0004733;2.90e-08;12!UBERON:0002028;2.90e-08;12!UBERON:0002390;2.90e-08;32!UBERON:0002298;3.14e-08;6!UBERON:0001871;6.15e-08;6!UBERON:0002021;6.95e-08;5!UBERON:0001872;9.00e-08;5!UBERON:0000369;7.76e-07;4!UBERON:0002435;7.76e-07;4!UBERON:0000204;7.76e-07;4!UBERON:0011216;9.62e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.81e-49,56;UBERON:0005068,1.81e-49,56;UBERON:0006241,1.81e-49,56;UBERON:0007135,1.81e-49,56;UBERON:0000073,4.66e-46,53;UBERON:0002616,4.66e-46,53;UBERON:0001017,2.42e-44,81;UBERON:0001016,1.44e-42,89;UBERON:0007023,5.24e-41,114;UBERON:0002780,3.85e-39,41;UBERON:0001890,3.85e-39,41;UBERON:0003080,3.85e-39,41;UBERON:0006240,3.85e-39,41;UBERON:0000955,5.29e-37,68;UBERON:0006238,5.29e-37,68;UBERON:0003528,1.09e-34,34;UBERON:0002020,1.09e-34,34;UBERON:0001893,1.26e-34,34;UBERON:0001869,1.55e-32,32;UBERON:0002791,2.32e-32,32;UBERON:0003075,8.08e-31,82;UBERON:0007284,8.08e-31,82;UBERON:0002346,1.53e-28,86;UBERON:0002619,4.13e-28,22;UBERON:0001950,1.96e-25,20;UBERON:0003056,1.11e-24,61;UBERON:0000956,7.38e-24,25;UBERON:0000203,7.38e-24,25;UBERON:0010371,1.47e-20,104;UBERON:0011216,8.37e-15,223;UBERON:0004121,1.50e-14,171;UBERON:0000924,1.50e-14,171;UBERON:0006601,1.50e-14,171;UBERON:0010314,2.76e-14,132;UBERON:0002420,8.29e-13,9;UBERON:0007245,8.29e-13,9;UBERON:0010009,8.29e-13,9;UBERON:0010011,8.29e-13,9;UBERON:0000454,8.29e-13,9;UBERON:0000125,2.28e-12,9;UBERON:0002308,2.28e-12,9;UBERON:0003076,2.71e-11,15;UBERON:0003057,2.71e-11,15;UBERON:0000178,1.10e-10,15;UBERON:0000179,1.10e-10,15;UBERON:0000463,1.10e-10,15;UBERON:0009663,4.17e-10,7;UBERON:0000200,3.05e-09,6;UBERON:0004732,3.47e-09,13;UBERON:0000349,2.84e-08,5;UBERON:0004733,2.93e-08,12;UBERON:0002028,2.93e-08,12;UBERON:0007277,2.93e-08,12;UBERON:0002298,3.16e-08,6;UBERON:0001871,6.20e-08,6;UBERON:0002021,7.07e-08,5;UBERON:0001872,9.02e-08,5;UBERON:0000369,7.78e-07,4;UBERON:0002435,7.78e-07,4;UBERON:0000204,7.78e-07,4;UBERON:0010082,7.78e-07,4 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0,0.85870796139317,0,0.125542639594803,1.91033514369878,1.23150884174919,1.73163718890094,9.4407426443737,8.82807615623589,10.6823125088092,0,0,0,0.154934401160603,1.13735385989937,37.5808562348604,8.86392653651004,6.21687787157439,4.12320654360118,0.223915474239924,0.647787332037959,0,0.145398238779565,0.377875943688809,0,0.697287110717054,0,0,0,0,0,0.689491361473237,1.29096936716765,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0,0.56738522469114,1.24564449799115,0,0,0,0,0.736555271975129,0,0,0.212604299965044,0,0,0,0.16072558669708,0.285012743741249,0,0,0,0,0.889509253863555,0.426730222566507,0,1.14950487990897,0,0.954053754535364,0.569212969109448,1.17447437874188,1.14681968437569,1.32171328579026,6.1655941927969,26.0750243927326,1.7703879310245,1.96505381374582,1.43921049299656,0.501559486172034,0.977766799900771,0.473447805734733,1.94826728407911,0.222820913770347,0.294605907474837,0,1.62482318259009,0,0,0.328875809207352,0.276350017785848,0.289803085735052,2.07601188426885,1.60524496853828,2.09071047609954,0,1.91610246800961,0.34362744548263,4.30133476433155,3.50421955756506,5.85975108470777,1.90090408889675,5.42070428679982,6.65530378002976,3.74792179657038,2.60454977248419,2.46338399076314,11.289977620585,6.68600489458768,3.47578569318718,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,19.0574554849172,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0.300091096084402,0.206105058476878,0,0,0,0.0974370051611986,0,0,0,3.90510551768276,0.403008392910561,0,0,0,0,2.07355300420312,0.662648841607426,1.2781333715647,2.38420426535352,0.504641701751257,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,10.153651286537,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.26800176769578,36.6477213975585,29.3253501808944,26.3103224373484,3.81141936333695,27.3293693101006,6.95959931499926,13.5688174920822,6.37938751653163,1.49801404789436,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0.368738337083406,0,0,0,8.68425709716127,8.84428223356329,9.71220776011343,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.515205058238611,0,0,0,0,0,0.386682873168488,0,0,0,0.214840489736547,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.239293992399,0,0.143411352204052,0,0,0,0,0,0,0,0,0.670302275535787,0,0.282431402330337,0,0,0,0,3.55213326462519,5.35246044999663,6.26611905891579,5.95579438644473,5.34770955012053,5.18778648954174,7.56044012133361,6.34500141035416,0,0,0,0.185803175125719,1.00988449083511,40.4797088652476,0.159426272728822,0,40.4076330979294,2.11673582723883,4.22008522356922,4.7735520279288,0.912938716132769,7.99067468442419,270.685235257272,0,22.1611543643105,0,223.995121025112,294.727585800446,0,0,0,0,0.278406173895242,2.46174797895425,0.540911356951966,2.99764771198038,1.4098700508785,0,0.293016358543788,0,4.90350890820905,0,0,0.890894042497916,0,160.057771290374,201.579273716265,0,0.16480387422676,0,1.39473591775749,8.84108529699673,0,0,0.738508832766417,0,0,0,0,0.0986434056369336,7.18449277040819,0,105.657269324379,58.3511337438044,89.8262091005374,0,0,0,0,0,0,0,0,0.347249989866585,146.147328659283,145.198112104991,112.910484874642,107.040723613425,42.8544047482644,53.9688076998772,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0.158936578980379,0,0,0,0,1.99052386215701,0.530745387020035,1.83309043480088,0.296521128680622,0.741383633679017,1.56632924258183,23.994803341121,0,37.2480468703289,0.364909578431332,0,0,0.394584402849391,0,82.3335728786018,2.0851571277401,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,2.48578814858586,0,0,128.774158974257,0,0,4.26905989478705,0,0,0,0,0,0,0,0,0,0,0,79.2554781096922,40.5239921520299,195.452279742468,0,2.62887354279315,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0.338693328263138,139.960425406437,181.831547158953,0.643012593860077,0.275078873194468,0,0,0,193.183590172518,0,0,0.944182586429966,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,53.1352950645973,41.5210369472047,0,0,0.961086713109252,2.04365596629566,0.828478110694391,0.992332043623902,0,0.121792598380896,0,0,0,0,0,0,107.214249776005,138.743863193532,140.714606114106,30.9640965672638,29.9508439149501,45.0819885354444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,183.883720081802,0,0.265729680626726,0.163565394255844,0,0,0.211312123358627,2.99981093782395,1.28030075632969,0,0,0,0,0,17.0099513833857,0.323474434190045,0,2.51182167841632,0,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| ||
|short_description=p1@BZRAP1 | |||
}} | }} |
Latest revision as of 10:56, 16 September 2015
Short description: | p1@BZRAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BZRAP1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000268893, ENST00000343736, ENST00000355701, NM_004758, NM_024418, uc002ivx.3, uc010dcs.2, uc010wnt.1_5end |
EntrezGene: | BZRAP1 |
HGNC: | 16831 |
UniProt: | O95153A7E2C5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 4.96e-13 | 52 |
T cell | 1.26e-12 | 25 |
pro-T cell | 1.26e-12 | 25 |
lymphocyte | 1.30e-12 | 53 |
common lymphoid progenitor | 1.30e-12 | 53 |
mature alpha-beta T cell | 8.34e-12 | 18 |
alpha-beta T cell | 8.34e-12 | 18 |
immature T cell | 8.34e-12 | 18 |
mature T cell | 8.34e-12 | 18 |
immature alpha-beta T cell | 8.34e-12 | 18 |
CD8-positive, alpha-beta T cell | 1.67e-10 | 11 |
hematopoietic stem cell | 2.05e-08 | 168 |
hematopoietic cell | 1.08e-07 | 177 |
hematopoietic oligopotent progenitor cell | 9.85e-07 | 161 |
hematopoietic multipotent progenitor cell | 9.85e-07 | 161 |