FFCP PHASE1:Hg19::chr17:56358047..56358058,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:56358047..56358058,- to FFCP PHASE1:Hg19::chr17:56358047..56358058,-: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4353 | |EntrezGene=4353 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7218 | |HGNC=7218 | ||
|TSSclassifier=strong | |||
|UniProt=P05164 | |UniProt=P05164 | ||
|association_with_transcript=60bp_to_HQ258645,S56200_5end | |||
|cluster_id=chr17:56358047..56358058,- | |||
|coexpression_cluster_id=C209 | |||
|description=CAGE_peak_3_at_MPO_5end | |||
|id=chr17:56358047..56358058,- | |||
|ontology_enrichment_celltype=CL:0000764!3.86e-10!2;CL:0000765!3.86e-10!2;CL:0000050!3.86e-10!2;CL:0000038!3.86e-10!2;CL:0000558!3.86e-10!2;CL:0000547!3.86e-10!2;CL:0000549!3.86e-10!2;CL:0000550!3.86e-10!2;CL:0000552!3.86e-10!2 | |||
|ontology_enrichment_celltype_v019=CL:0002032;1.78e-11;1!CL:0000557;1.78e-11;1!CL:0000037;2.68e-11;1!CL:0001024;2.68e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,2.68e-11,1 | |||
|ontology_enrichment_development_v019=UBERON:0010226;3.82e-11;1!UBERON:0004140;3.82e-11;1 | |||
|ontology_enrichment_disease=DOID:8692!1.03e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:225;9.57e-12;1!DOID:8692;3.55e-11;31!DOID:1240;1.24e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:225,9.57e-12,1;DOID:8692,1.83e-11,31;DOID:1240,5.05e-09,39;DOID:2531,8.63e-07,51;DOID:0060083,8.63e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0004177!5.03e-11!7;UBERON:0007023!1.68e-08!115;UBERON:0002106!3.33e-07!3;UBERON:0004854!3.33e-07!3;UBERON:0009034!3.33e-07!3;UBERON:0002095!3.33e-07!3;UBERON:0004782!3.33e-07!3;UBERON:0003281!3.33e-07!3;UBERON:0009664!3.33e-07!3;UBERON:0002296!3.33e-07!3;UBERON:0005602!3.33e-07!3;UBERON:0001179!3.33e-07!3;UBERON:0006293!3.33e-07!3;UBERON:0004151!3.66e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.74e-20;2!UBERON:0005058;1.74e-20;2!UBERON:0009113;1.74e-20;2!UBERON:0004177;2.53e-18;5!UBERON:0005057;2.53e-18;5!UBERON:0002084;3.82e-11;1!UBERON:0002082;3.82e-11;1!UBERON:0002405;4.31e-09;27!UBERON:0002390;6.69e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.77e-13,7;UBERON:0005057,2.77e-13,7;UBERON:0002084,4.01e-11,1;UBERON:0002082,4.01e-11,1;UBERON:0010226,4.01e-11,1;UBERON:0002370,9.42e-11,4;UBERON:0005058,9.42e-11,4;UBERON:0009113,9.42e-11,4;UBERON:0003295,9.42e-11,4;UBERON:0005562,9.42e-11,4;UBERON:0000974,2.45e-09,10;UBERON:0003351,1.86e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.04641054403633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,81.1222981107237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.784306353074702,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,280.797978337491,0,32.4093244227133,164.513890561674,10.0253790836027,0,0.481764225311099,89.3972702856341,31.9384678267745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.7169199713853,0,0,0,0,0,0,0,0.89268582976749,2.88888931692923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,2.09818352539992,0,0,0,0.714695326373367,2.64836788146173,0,0,0,0,0,0,0,0,0.146552233678082,14.5757577803443,0,0,0,0,0.747511887973863,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,269.183234018317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.469919589899268,11.5379619472703,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0661699095049,0,1.16260037704811,6.70406914395265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.04641054403633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,81.1222981107237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.784306353074702,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,280.797978337491,0,32.4093244227133,164.513890561674,10.0253790836027,0,0.481764225311099,89.3972702856341,31.9384678267745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.7169199713853,0,0,0,0,0,0,0,0.89268582976749,2.88888931692923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,2.09818352539992,0,0,0,0.714695326373367,2.64836788146173,0,0,0,0,0,0,0,0,0.146552233678082,14.5757577803443,0,0,0,0,0.747511887973863,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,269.183234018317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.469919589899268,11.5379619472703,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0661699095049,0,1.16260037704811,6.70406914395265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@MPO | |||
}} | }} |
Latest revision as of 10:44, 16 September 2015
Short description: | p3@MPO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MPO_5end |
Coexpression cluster: | C209_acute_myelodysplastic_CD34_granulocyte_CD133_liver_spleen |
Association with transcript: | 60bp_to_HQ258645, S56200_5end |
EntrezGene: | MPO |
HGNC: | 7218 |
UniProt: | P05164 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 2.68e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.77e-13 | 7 |
immune organ | 2.77e-13 | 7 |
heart left ventricle | 4.01e-11 | 1 |
cardiac ventricle | 4.01e-11 | 1 |
future cardiac ventricle | 4.01e-11 | 1 |
thymus | 9.42e-11 | 4 |
hemolymphoid system gland | 9.42e-11 | 4 |
thymic region | 9.42e-11 | 4 |
pharyngeal gland | 9.42e-11 | 4 |
thymus primordium | 9.42e-11 | 4 |
neck | 2.45e-09 | 10 |
pharyngeal epithelium | 1.86e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
syndrome | 9.57e-12 | 1 |
myeloid leukemia | 1.83e-11 | 31 |
leukemia | 5.05e-09 | 39 |
hematologic cancer | 8.63e-07 | 51 |
immune system cancer | 8.63e-07 | 51 |