FFCP PHASE1:Hg19::chr2:242447732..242447779,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10494 | |EntrezGene=10494 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11404 | |HGNC=11404 | ||
|TSSclassifier=strong | |||
|UniProt=O00506,C9J6L2,E7EM58,C9J8E8 | |UniProt=O00506,C9J6L2,E7EM58,C9J8E8 | ||
|association_with_transcript=0bp_to_ENST00000401869,ENST00000424537,ENST00000436402,ENST00000439101_5end | |association_with_transcript=0bp_to_ENST00000401869,ENST00000424537,ENST00000436402,ENST00000439101_5end | ||
|cluster_id=chr2:242447732..242447779,- | |||
|coexpression_cluster_id=C843 | |||
|description=CAGE_peak_2_at_STK25_5end | |description=CAGE_peak_2_at_STK25_5end | ||
|id=chr2:242447732..242447779,- | |id=chr2:242447732..242447779,- | ||
|ontology_enrichment_celltype=CL:0000220!1.04e-29!246;CL:0000222!2.08e-29!119;CL:0002321!3.57e-29!248;CL:0000055!2.42e-21!180;CL:0002078!3.24e-17!44;CL:0000115!9.36e-17!35;CL:0000183!3.27e-16!59;CL:0000680!2.30e-14!57;CL:0000056!2.30e-14!57;CL:0000355!2.30e-14!57;CL:0002139!2.82e-14!24;CL:0000187!1.50e-13!54;CL:0000066!1.75e-13!254;CL:0000213!2.86e-13!57;CL:0000215!2.86e-13!57;CL:0000071!5.34e-12!18;CL:0002546!5.34e-12!18;CL:0000393!1.02e-11!60;CL:0000211!1.02e-11!60;CL:0000192!2.14e-11!42;CL:0000514!2.14e-11!42;CL:0000359!9.47e-10!32;CL:0000548!4.69e-09!679;CL:0000004!4.69e-09!679;CL:0000255!4.69e-09!679;CL:0000144!7.85e-09!625;CL:0000057!8.92e-09!75;CL:0000012!1.78e-08!682;CL:0002371!2.38e-08!591;CL:1000449!7.31e-08!16;CL:1000413!5.83e-07!9;CL:0002681!8.62e-07!13;CL:0002584!8.62e-07!13 | |ontology_enrichment_celltype=CL:0000220!1.04e-29!246;CL:0000222!2.08e-29!119;CL:0002321!3.57e-29!248;CL:0000055!2.42e-21!180;CL:0002078!3.24e-17!44;CL:0000115!9.36e-17!35;CL:0000183!3.27e-16!59;CL:0000680!2.30e-14!57;CL:0000056!2.30e-14!57;CL:0000355!2.30e-14!57;CL:0002139!2.82e-14!24;CL:0000187!1.50e-13!54;CL:0000066!1.75e-13!254;CL:0000213!2.86e-13!57;CL:0000215!2.86e-13!57;CL:0000071!5.34e-12!18;CL:0002546!5.34e-12!18;CL:0000393!1.02e-11!60;CL:0000211!1.02e-11!60;CL:0000192!2.14e-11!42;CL:0000514!2.14e-11!42;CL:0000359!9.47e-10!32;CL:0000548!4.69e-09!679;CL:0000004!4.69e-09!679;CL:0000255!4.69e-09!679;CL:0000144!7.85e-09!625;CL:0000057!8.92e-09!75;CL:0000012!1.78e-08!682;CL:0002371!2.38e-08!591;CL:1000449!7.31e-08!16;CL:1000413!5.83e-07!9;CL:0002681!8.62e-07!13;CL:0002584!8.62e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000115;5.13e-15;36!CL:0002139;1.74e-14;24!CL:0000071;3.76e-12;18!CL:0002078;4.02e-12;45!CL:0000359;2.04e-09;32!CL:0000213;2.76e-09;58!CL:0000215;2.76e-09;58!CL:1000449;1.89e-08;15!CL:0000192;2.28e-08;43!CL:0000187;3.03e-08;55!CL:0002681;1.80e-07;12!CL:0002584;1.80e-07;12!CL:1000413;4.81e-07;9!CL:1000497;9.58e-07;17!CL:0002518;9.58e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.92e-30,121;CL:0002321,1.55e-29,250;CL:0002078,5.87e-18,45;CL:0000115,1.64e-17,36;CL:0002139,2.34e-14,24;CL:0000680,3.73e-14,58;CL:0000056,3.73e-14,58;CL:0000355,3.73e-14,58;CL:0000213,5.27e-14,58;CL:0000215,5.27e-14,58;CL:0000187,2.45e-13,55;CL:0000066,3.21e-13,253;CL:0000071,4.59e-12,18;CL:0002546,4.59e-12,18;CL:0000393,1.49e-11,61;CL:0000211,1.49e-11,61;CL:0000192,3.73e-11,43;CL:0000514,3.73e-11,43;CL:0000359,8.40e-10,32;CL:0000057,5.11e-09,76;CL:1000449,1.95e-08,15;CL:0002681,2.23e-07,12;CL:0002584,2.23e-07,12;CL:1000413,5.38e-07,9;CL:1000497,7.93e-07,17;CL:0002518,7.93e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002546;3.76e-12;18!CL:0000222;7.68e-09;121!CL:0000514;2.28e-08;43!CL:0000355;5.97e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.78e-26!312;UBERON:0000483!4.45e-26!309;UBERON:0002049!1.74e-22!79;UBERON:0007798!1.74e-22!79;UBERON:0003914!3.96e-21!118;UBERON:0000475!1.66e-19!365;UBERON:0000055!3.80e-19!69;UBERON:0004872!1.59e-18!84;UBERON:0000477!1.13e-17!286;UBERON:0005256!2.29e-17!143;UBERON:0000490!2.42e-17!138;UBERON:0000486!4.63e-17!82;UBERON:0001981!5.08e-17!60;UBERON:0007500!5.08e-17!60;UBERON:0004537!5.08e-17!60;UBERON:0006965!5.08e-17!60;UBERON:0000481!5.37e-17!347;UBERON:0004111!7.92e-17!241;UBERON:0000914!9.17e-17!83;UBERON:0002329!9.17e-17!83;UBERON:0003077!9.17e-17!83;UBERON:0003059!9.17e-17!83;UBERON:0007282!9.17e-17!83;UBERON:0009618!9.17e-17!83;UBERON:0007285!9.17e-17!83;UBERON:0000025!1.37e-16!194;UBERON:0002100!8.14e-16!216;UBERON:0004290!3.10e-15!70;UBERON:0001134!3.18e-14!61;UBERON:0002036!3.18e-14!61;UBERON:0003082!3.18e-14!61;UBERON:0004535!3.91e-14!110;UBERON:0001009!4.76e-14!113;UBERON:0001637!1.04e-13!42;UBERON:0003509!1.04e-13!42;UBERON:0004572!1.04e-13!42;UBERON:0002385!3.93e-13!63;UBERON:0001015!3.93e-13!63;UBERON:0000383!3.93e-13!63;UBERON:0003104!1.13e-12!238;UBERON:0009142!1.13e-12!238;UBERON:0001986!5.34e-12!18;UBERON:0004638!5.34e-12!18;UBERON:0004852!5.34e-12!18;UBERON:0000487!5.79e-11!22;UBERON:0000468!4.05e-10!659;UBERON:0006914!5.08e-10!25;UBERON:0004573!1.63e-09!33;UBERON:0004571!1.63e-09!33;UBERON:0000064!1.02e-08!219;UBERON:0000467!1.57e-08!625;UBERON:0000480!2.51e-08!626;UBERON:0004211!7.31e-08!16;UBERON:0001285!7.31e-08!16;UBERON:0007684!7.31e-08!16;UBERON:0003220!7.31e-08!16;UBERON:0004208!7.31e-08!16;UBERON:0000353!1.19e-07!17;UBERON:0006555!1.49e-07!17;UBERON:0005103!1.49e-07!17;UBERON:0000083!1.49e-07!17;UBERON:0009201!1.49e-07!17;UBERON:0004819!1.49e-07!17;UBERON:0006553!1.49e-07!17;UBERON:0003074!1.49e-07!17;UBERON:0003060!1.49e-07!17;UBERON:0002050!2.74e-07!605;UBERON:0005423!2.74e-07!605;UBERON:0000923!3.83e-07!604;UBERON:0005291!3.83e-07!604;UBERON:0006598!3.83e-07!604;UBERON:0002532!3.83e-07!604;UBERON:0000922!4.13e-07!612;UBERON:0003915!5.83e-07!9;UBERON:0004700!5.83e-07!9;UBERON:0001917!5.83e-07!9;UBERON:0003103!6.29e-07!69;UBERON:0001225!8.62e-07!13;UBERON:0008987!8.62e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;3.12e-12;74!UBERON:0004638;3.76e-12;18!UBERON:0001986;3.76e-12;18!UBERON:0004852;3.76e-12;18!UBERON:0007500;3.07e-11;56!UBERON:0001981;3.07e-11;56!UBERON:0004537;3.07e-11;56!UBERON:0000487;4.48e-11;22!UBERON:0000490;1.72e-10;33!UBERON:0000055;1.91e-10;65!UBERON:0001637;4.31e-10;42!UBERON:0003509;4.31e-10;42!UBERON:0004572;4.31e-10;42!UBERON:0006914;5.01e-10;25!UBERON:0002049;6.12e-10;75!UBERON:0007798;6.12e-10;75!UBERON:0004573;6.54e-09;33!UBERON:0004571;6.54e-09;33!UBERON:0006555;1.89e-08;15!UBERON:0004819;1.89e-08;15!UBERON:0001285;1.89e-08;15!UBERON:0007684;1.89e-08;15!UBERON:0000353;4.42e-08;15!UBERON:0000025;4.66e-08;93!UBERON:0001225;1.80e-07;12!UBERON:0008987;1.80e-07;12!UBERON:0003915;4.81e-07;9!UBERON:0004700;4.81e-07;9!UBERON:0001917;4.81e-07;9!UBERON:0000119;8.30e-07;139 | |||
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| ||
|short_description=p2@STK25 | |short_description=p2@STK25 | ||
}} | }} |
Latest revision as of 10:41, 16 September 2015
Short description: | p2@STK25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_STK25_5end |
Coexpression cluster: | C843_Alveolar_Mesenchymal_Hepatic_Placental_Renal_Smooth_Fibroblast |
Association with transcript: | 0bp_to_ENST00000401869, ENST00000424537, ENST00000436402, ENST00000439101_5end |
EntrezGene: | STK25 |
HGNC: | 11404 |
UniProt: | O00506C9J6L2E7EM58C9J8E8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.92e-30 | 121 |
embryonic cell | 1.55e-29 | 250 |
meso-epithelial cell | 5.87e-18 | 45 |
endothelial cell | 1.64e-17 | 36 |
endothelial cell of vascular tree | 2.34e-14 | 24 |
muscle precursor cell | 3.73e-14 | 58 |
myoblast | 3.73e-14 | 58 |
multi-potent skeletal muscle stem cell | 3.73e-14 | 58 |
lining cell | 5.27e-14 | 58 |
barrier cell | 5.27e-14 | 58 |
muscle cell | 2.45e-13 | 55 |
epithelial cell | 3.21e-13 | 253 |
blood vessel endothelial cell | 4.59e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.59e-12 | 18 |
electrically responsive cell | 1.49e-11 | 61 |
electrically active cell | 1.49e-11 | 61 |
smooth muscle cell | 3.73e-11 | 43 |
smooth muscle myoblast | 3.73e-11 | 43 |
vascular associated smooth muscle cell | 8.40e-10 | 32 |
fibroblast | 5.11e-09 | 76 |
epithelial cell of nephron | 1.95e-08 | 15 |
kidney cortical cell | 2.23e-07 | 12 |
renal cortical epithelial cell | 2.23e-07 | 12 |
endothelial cell of artery | 5.38e-07 | 9 |
kidney cell | 7.93e-07 | 17 |
kidney epithelial cell | 7.93e-07 | 17 |