FFCP PHASE1:Hg19::chr1:11751665..11751698,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10459 | |EntrezGene=10459 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6764 | |HGNC=6764 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UI95 | |UniProt=Q9UI95 | ||
|association_with_transcript=0bp_to_ENST00000376667,NM_001127325,uc001asq.3,uc009vnc.2_5end | |association_with_transcript=0bp_to_ENST00000376667,NM_001127325,uc001asq.3,uc009vnc.2_5end | ||
|cluster_id=chr1:11751665..11751698,- | |||
|coexpression_cluster_id=C1814 | |coexpression_cluster_id=C1814 | ||
|description=CAGE_peak_5_at_MAD2L2_5end | |description=CAGE_peak_5_at_MAD2L2_5end | ||
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|ontology_enrichment_celltype=CL:0002319!2.43e-15!25;CL:0000047!8.86e-10!8;CL:0000133!2.27e-09!59;CL:0000095!4.12e-08!17;CL:0000123!4.12e-08!17;CL:0000128!6.45e-08!7;CL:0000126!6.45e-08!7;CL:0000127!6.45e-08!7;CL:0002453!6.45e-08!7;CL:0000540!6.89e-08!6;CL:0000031!6.89e-08!6;CL:0000404!6.89e-08!6;CL:0002322!8.23e-07!5 | |ontology_enrichment_celltype=CL:0002319!2.43e-15!25;CL:0000047!8.86e-10!8;CL:0000133!2.27e-09!59;CL:0000095!4.12e-08!17;CL:0000123!4.12e-08!17;CL:0000128!6.45e-08!7;CL:0000126!6.45e-08!7;CL:0000127!6.45e-08!7;CL:0002453!6.45e-08!7;CL:0000540!6.89e-08!6;CL:0000031!6.89e-08!6;CL:0000404!6.89e-08!6;CL:0002322!8.23e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.47e-30;25!CL:0000128;1.41e-18;7!CL:0000126;1.41e-18;7!CL:0000127;1.41e-18;7!CL:0000540;1.94e-18;6!CL:0000404;1.94e-18;6!CL:0002322;1.34e-15;5!CL:0000095;6.96e-13;17!CL:0002603;3.02e-09;3!CL:0000243;4.36e-09;15!CL:0000125;4.36e-09;15!CL:0002321;8.92e-09;15!CL:0000064;9.14e-09;3!CL:0000067;9.14e-09;3!CL:0005012;9.14e-09;3!CL:0002605;9.14e-09;3!CL:0002304;9.14e-09;3!CL:0000123;3.00e-07;2!CL:0000242;3.00e-07;2!CL:0000047;9.34e-07;2 | |ontology_enrichment_celltype_v019=CL:0002319;1.47e-30;25!CL:0000128;1.41e-18;7!CL:0000126;1.41e-18;7!CL:0000127;1.41e-18;7!CL:0000540;1.94e-18;6!CL:0000404;1.94e-18;6!CL:0002322;1.34e-15;5!CL:0000095;6.96e-13;17!CL:0002603;3.02e-09;3!CL:0000243;4.36e-09;15!CL:0000125;4.36e-09;15!CL:0002321;8.92e-09;15!CL:0000064;9.14e-09;3!CL:0000067;9.14e-09;3!CL:0005012;9.14e-09;3!CL:0002605;9.14e-09;3!CL:0002304;9.14e-09;3!CL:0000123;3.00e-07;2!CL:0000242;3.00e-07;2!CL:0000047;9.34e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.85e-30,25;CL:0000047,1.84e-23,8;CL:0000133,5.94e-23,59;CL:0000128,1.69e-18,7;CL:0000126,1.69e-18,7;CL:0000127,1.69e-18,7;CL:0002453,1.69e-18,7;CL:0000540,2.02e-18,6;CL:0000031,2.02e-18,6;CL:0000404,2.02e-18,6;CL:0000221,9.85e-18,72;CL:0002322,1.45e-15,5;CL:0000095,7.96e-13,17;CL:0000123,7.96e-13,17;CL:0000333,1.24e-09,41;CL:0002603,2.15e-09,3;CL:0000243,4.79e-09,15;CL:0000125,4.79e-09,15;CL:0000030,4.79e-09,15;CL:0000339,4.79e-09,15;CL:0000064,6.30e-09,3;CL:0000067,6.30e-09,3;CL:0005012,6.30e-09,3;CL:0002304,6.30e-09,3;CL:0002605,1.19e-08,3;CL:0000242,3.19e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000031;1.94e-18;6!CL:0000133;2.82e-12;59!CL:0000339;4.36e-09;15 | |ontology_enrichment_development_v019=CL:0000031;1.94e-18;6!CL:0000133;2.82e-12;59!CL:0000339;4.36e-09;15 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;7.78e-09;22!DOID:2994;7.78e-09;22 | |ontology_enrichment_disease_v019=DOID:3095;7.78e-09;22!DOID:2994;7.78e-09;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,1.06e-08,22;DOID:2994,1.06e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0001017!9.78e-20!82;UBERON:0000073!5.34e-19!94;UBERON:0001016!5.34e-19!94;UBERON:0005743!7.55e-19!86;UBERON:0000955!2.06e-13!69;UBERON:0006238!2.06e-13!69;UBERON:0002346!3.67e-13!90;UBERON:0003075!1.70e-12!86;UBERON:0007284!1.70e-12!86;UBERON:0000924!1.74e-12!173;UBERON:0006601!1.74e-12!173;UBERON:0004121!7.42e-12!169;UBERON:0001049!1.71e-11!57;UBERON:0005068!1.71e-11!57;UBERON:0006241!1.71e-11!57;UBERON:0007135!1.71e-11!57;UBERON:0002616!1.27e-10!59;UBERON:0001893!9.58e-10!34;UBERON:0003056!1.67e-09!61;UBERON:0002791!2.00e-09!33;UBERON:0001869!4.99e-09!32;UBERON:0002020!5.29e-09!34;UBERON:0003528!5.29e-09!34;UBERON:0000033!7.52e-09!123;UBERON:0000153!1.30e-08!129;UBERON:0007811!1.30e-08!129;UBERON:0002780!2.53e-08!41;UBERON:0001890!2.53e-08!41;UBERON:0006240!2.53e-08!41;UBERON:0003080!5.94e-08!42;UBERON:0000956!7.22e-08!25;UBERON:0000203!7.22e-08!25 | |ontology_enrichment_uberon=UBERON:0001017!9.78e-20!82;UBERON:0000073!5.34e-19!94;UBERON:0001016!5.34e-19!94;UBERON:0005743!7.55e-19!86;UBERON:0000955!2.06e-13!69;UBERON:0006238!2.06e-13!69;UBERON:0002346!3.67e-13!90;UBERON:0003075!1.70e-12!86;UBERON:0007284!1.70e-12!86;UBERON:0000924!1.74e-12!173;UBERON:0006601!1.74e-12!173;UBERON:0004121!7.42e-12!169;UBERON:0001049!1.71e-11!57;UBERON:0005068!1.71e-11!57;UBERON:0006241!1.71e-11!57;UBERON:0007135!1.71e-11!57;UBERON:0002616!1.27e-10!59;UBERON:0001893!9.58e-10!34;UBERON:0003056!1.67e-09!61;UBERON:0002791!2.00e-09!33;UBERON:0001869!4.99e-09!32;UBERON:0002020!5.29e-09!34;UBERON:0003528!5.29e-09!34;UBERON:0000033!7.52e-09!123;UBERON:0000153!1.30e-08!129;UBERON:0007811!1.30e-08!129;UBERON:0002780!2.53e-08!41;UBERON:0001890!2.53e-08!41;UBERON:0006240!2.53e-08!41;UBERON:0003080!5.94e-08!42;UBERON:0000956!7.22e-08!25;UBERON:0000203!7.22e-08!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0000488;4.81e-11;4!UBERON:0000922;1.71e-09;49!UBERON:0001778;9.14e-09;3!UBERON:0001775;9.14e-09;3!UBERON:0007625;2.43e-08;11!UBERON:0002203;2.23e-07;6!UBERON:0001768;2.23e-07;6!UBERON:0002200;2.23e-07;6!UBERON:0002104;6.01e-07;21 | |ontology_enrichment_uberon_v019=UBERON:0000488;4.81e-11;4!UBERON:0000922;1.71e-09;49!UBERON:0001778;9.14e-09;3!UBERON:0001775;9.14e-09;3!UBERON:0007625;2.43e-08;11!UBERON:0002203;2.23e-07;6!UBERON:0001768;2.23e-07;6!UBERON:0002200;2.23e-07;6!UBERON:0002104;6.01e-07;21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,2.53e-11,4;UBERON:0001016,1.28e-09,89;UBERON:0001017,4.46e-09,81;UBERON:0001778,6.30e-09,3;UBERON:0001775,6.30e-09,3;UBERON:0004121,8.77e-09,171;UBERON:0000924,8.77e-09,171;UBERON:0006601,8.77e-09,171;UBERON:0007625,1.69e-08,11;UBERON:0002203,1.47e-07,6;UBERON:0001768,1.47e-07,6;UBERON:0002200,1.47e-07,6;UBERON:0000019,1.78e-07,20;UBERON:0000047,1.78e-07,20;UBERON:0010312,1.78e-07,20;UBERON:0004088,1.78e-07,20;UBERON:0010230,1.78e-07,20;UBERON:0003072,1.78e-07,20;UBERON:0004128,1.78e-07,20;UBERON:0003071,1.78e-07,20;UBERON:0002346,3.87e-07,86;UBERON:0000970,4.66e-07,21;UBERON:0002104,4.66e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0,0,0,0,0,0,0,1.72369481307503,3.4680117511523,3.13454721478088,2.0036519099174,1.09499540058307,1.63205431473244,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.260118695119756,0.164437904603676,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0.821127996921047,0,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0.795285947051099,0.973269740605272,2.45790524626576,1.33037638477538,1.75669571386252,0.0654895377488563,0,0,0.97364218096405,0,0.26591592103773,0,0,0,0,0,0.347140501607594,0,0,0.550236083880135,0,0,0,0,1.20848795132744,0,1.22031028774085,0,1.62028389576352,0.0892997282840798,0,0,0,0.949265659568129,0.916008719652036,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0.302714855289863,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0.193260853163297,0,0.286804595389004,6.70855383712775,6.09636934278832,5.6935032006064,4.35376431064556,6.56034212276634,4.74470566798579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,1.47008711385542,0,0,0,7.94633578946371,0,1.71567810298526,0,0,0,0,0,0,1.44331342025273,2.31860809950154,0.587043471179108,0.433099343283221,1.85194205030644,0.761016608938393,0,0.858486162094873,0,0.936017060556951,0.148631162288728,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0.215627574859517,0.77005821767849,1.27047312111232,6.50699269288109,4.63973287666617,8.04078073604874,9.56908127479745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0.303127571446259,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,1.00253235151642,0.276242966807689,0,0,0,0.451199612907412,0.616122696835318,0.784349769176855,0,0.316654886678627,0,0,0,0,0.270946437543853,1.00337954770971,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0.773365746336976,0,0.15350367472613,0,0,0,0.170453254832202,0.801288320820636,0,0.192190067365106,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,1.68471475667626,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0.640944426764839,0,0,0,2.45257662059956,0,1.4348364545594,0,0,0,0.973865820823666,0,1.14117339516596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36408156524854,0,0.284136146806413,0,0.296964680832639,0,0.994147647766298,0.844016498463076,0,0,2.74463030566391,0,0,0,1.1249555075237,0,0,0,0,0,0,0,0,0,0.0927680981618513,13.9729658600836,0,0,0,0,0,0,5.17115059862197,0.874813840149763,2.60437492399938,0,0.844175070377856,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,9.79432837217568,0.126373159256976,0.300646838828985,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0.343972064943233,0,0,0,0,0.0882561266915003,0.225980740780532,0,0,0.126621591911757,0.586654148204409,0,0,0,0.432271251462318,1.83258553865465,0,0,0,0.235694034616795,0.135904206073614,0.418411385249333,0,0,0,0.410716136675979,0,0,0.262887354279314,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,5.30485389934563,6.60189295666722,3.32352270423348,0,0,0.242998226632099,0,0.0788057072991982,0.996637174564964,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0.13223260174269,0,0.704815022316672,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.628216385000937,0,0.122026264901963,0.1251909307065,0.573409195690071,0.110929051536852,0.248385611765534,0.415045904808692,0.37494122388632,0,0,0,6.08835377548946,5.94176217304383,0,0,0.554805861502613,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.276516872303462,0.194860308839388,0.398594520940089,0.490696182767533,0,0,0,0,0,0,0,0,0,0,1.02315497042921,0.646948868380091,0.157265941855896,0,0,6.80239744325385,7.80795314831714,0,0,0.788617450012533,0.80057074828547,0,0.3062454773532,0.192687675289379,0,0,0,10.8390829375339,0.138314504928436,0.484426936895553,1.42769420259154,0,0.353909170043221,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,8.20462213527329,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.135939465953663,0.328863867814245,0,0,0.156986185701028,0.157115589916002,0,2.73947616152849,0,0,0,1.26410889386181,0.116241425368125,1.21700790611806,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0.971421986118279,6.78424444040106,2.78531085225916,2.49732190632894,0.67767649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| ||
|short_description=p5@MAD2L2 | |short_description=p5@MAD2L2 | ||
}} | }} |
Latest revision as of 09:55, 16 September 2015
Short description: | p5@MAD2L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MAD2L2_5end |
Coexpression cluster: | C1814_occipital_temporal_duodenum_parietal_Neurons_brain_Neural |
Association with transcript: | 0bp_to_ENST00000376667, NM_001127325, uc001asq.3, uc009vnc.2_5end |
EntrezGene: | MAD2L2 |
HGNC: | 6764 |
UniProt: | Q9UI95 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.85e-30 | 25 |
neuronal stem cell | 1.84e-23 | 8 |
neurectodermal cell | 5.94e-23 | 59 |
oligodendrocyte | 1.69e-18 | 7 |
macroglial cell | 1.69e-18 | 7 |
astrocyte | 1.69e-18 | 7 |
oligodendrocyte precursor cell | 1.69e-18 | 7 |
neuron | 2.02e-18 | 6 |
neuroblast | 2.02e-18 | 6 |
electrically signaling cell | 2.02e-18 | 6 |
ectodermal cell | 9.85e-18 | 72 |
embryonic stem cell | 1.45e-15 | 5 |
neuron associated cell | 7.96e-13 | 17 |
neuron associated cell (sensu Vertebrata) | 7.96e-13 | 17 |
migratory neural crest cell | 1.24e-09 | 41 |
astrocyte of the cerebellum | 2.15e-09 | 3 |
glial cell (sensu Vertebrata) | 4.79e-09 | 15 |
glial cell | 4.79e-09 | 15 |
glioblast | 4.79e-09 | 15 |
glioblast (sensu Vertebrata) | 4.79e-09 | 15 |
ciliated cell | 6.30e-09 | 3 |
ciliated epithelial cell | 6.30e-09 | 3 |
multi-ciliated epithelial cell | 6.30e-09 | 3 |
non-pigmented ciliary epithelial cell | 6.30e-09 | 3 |
astrocyte of the cerebral cortex | 1.19e-08 | 3 |
Merkel cell | 3.19e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
atypical epithelium | 2.53e-11 | 4 |
nervous system | 1.28e-09 | 89 |
central nervous system | 4.46e-09 | 81 |
ciliary epithelium | 6.30e-09 | 3 |
ciliary body | 6.30e-09 | 3 |
ectoderm-derived structure | 8.77e-09 | 171 |
ectoderm | 8.77e-09 | 171 |
presumptive ectoderm | 8.77e-09 | 171 |
pigment epithelium of eye | 1.69e-08 | 11 |
vasculature of eye | 1.47e-07 | 6 |
uvea | 1.47e-07 | 6 |
vasculature of head | 1.47e-07 | 6 |
camera-type eye | 1.78e-07 | 20 |
simple eye | 1.78e-07 | 20 |
immature eye | 1.78e-07 | 20 |
ocular region | 1.78e-07 | 20 |
eyeball of camera-type eye | 1.78e-07 | 20 |
optic cup | 1.78e-07 | 20 |
optic vesicle | 1.78e-07 | 20 |
eye primordium | 1.78e-07 | 20 |
neurectoderm | 3.87e-07 | 86 |
eye | 4.66e-07 | 21 |
visual system | 4.66e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.06e-08 | 22 |
germ cell cancer | 1.06e-08 | 22 |