FFCP PHASE1:Hg19::chr2:241937787..241937803,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:241937787..241937803,+
|short_description=p5@SNED1
|description=CAGE_peak_5_at_SNED1_5end
|association_with_transcript=-451bp_to_ENST00000310397,ENST000003...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25992 | |EntrezGene=25992 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24696 | |HGNC=24696 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TER0,B5MEF5 | |UniProt=Q8TER0,B5MEF5 | ||
|association_with_transcript=-451bp_to_ENST00000310397,ENST00000342631,ENST00000401884,ENST00000405547,NM_001080437,uc002wah.1_5end | |||
|cluster_id=chr2:241937787..241937803,+ | |||
|coexpression_cluster_id=C1156 | |||
|description=CAGE_peak_5_at_SNED1_5end | |||
|id=chr2:241937787..241937803,+ | |||
|ontology_enrichment_celltype=CL:0000188!8.31e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0002564;5.89e-16;3!CL:0002602;3.29e-11;2!CL:0002575;3.91e-11;2!CL:0002549;4.84e-10;2!CL:0002552;5.62e-09;5!CL:0000135;2.67e-07;3!CL:0000388;2.67e-07;3!CL:0000214;3.08e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,5.91e-16,3;CL:0002602,2.98e-11,2;CL:0002575,3.64e-11,2;CL:0002549,5.08e-10,2;CL:0002552,5.04e-09,5;CL:0000135,2.04e-07,3;CL:0000388,2.04e-07,3;CL:0000214,3.83e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.85e-15!115;UBERON:0002616!2.21e-08!59;UBERON:0001049!5.97e-08!57;UBERON:0005068!5.97e-08!57;UBERON:0006241!5.97e-08!57;UBERON:0007135!5.97e-08!57;UBERON:0003076!5.98e-08!15;UBERON:0003057!5.98e-08!15;UBERON:0000033!1.38e-07!123;UBERON:0004733!2.36e-07!12;UBERON:0002028!2.36e-07!12;UBERON:0007277!2.36e-07!12;UBERON:0000153!3.67e-07!129;UBERON:0007811!3.67e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;1.05e-29;8!UBERON:0000982;1.05e-29;8!UBERON:0004770;1.05e-29;8!UBERON:0011135;2.13e-25;5!UBERON:0002216;2.13e-25;5!UBERON:0011134;2.13e-25;5!UBERON:0002209;2.13e-25;5!UBERON:0002213;2.13e-25;5!UBERON:0007844;2.13e-25;5!UBERON:0011138;2.13e-25;5!UBERON:0001130;2.13e-25;5!UBERON:0001066;2.13e-25;5!UBERON:0001468;2.13e-25;5!UBERON:0002242;5.89e-16;3!UBERON:0006444;3.29e-11;2!UBERON:0001995;3.29e-11;2!UBERON:0004715;3.29e-11;2!UBERON:0000075;1.13e-10;16!UBERON:0005629;4.84e-10;2!UBERON:0005358;4.84e-10;2!UBERON:0001886;4.84e-10;2!UBERON:0004086;4.84e-10;2!UBERON:0005282;4.84e-10;2!UBERON:0005281;4.84e-10;2!UBERON:0002418;9.73e-08;3!UBERON:0004755;9.73e-08;3!UBERON:0007846;2.67e-07;3!UBERON:0000043;2.67e-07;3!UBERON:0007845;2.67e-07;3!UBERON:0006915;3.08e-07;3!UBERON:0007616;3.08e-07;3!UBERON:0002217;3.08e-07;3!UBERON:0002018;3.08e-07;3!UBERON:0001434;4.91e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,1.30e-29,8;UBERON:0000982,1.30e-29,8;UBERON:0004770,1.30e-29,8;UBERON:0011135,1.94e-25,5;UBERON:0002216,1.94e-25,5;UBERON:0011134,1.94e-25,5;UBERON:0002209,1.94e-25,5;UBERON:0002213,1.94e-25,5;UBERON:0005856,1.94e-25,5;UBERON:0005866,1.94e-25,5;UBERON:0005863,1.94e-25,5;UBERON:0007844,1.94e-25,5;UBERON:0011138,1.94e-25,5;UBERON:0001130,1.94e-25,5;UBERON:0001066,1.94e-25,5;UBERON:0001468,1.94e-25,5;UBERON:0002242,5.91e-16,3;UBERON:0003068,5.91e-16,3;UBERON:0002328,5.91e-16,3;UBERON:0004880,5.91e-16,3;UBERON:0006444,2.98e-11,2;UBERON:0001995,2.98e-11,2;UBERON:0004715,2.98e-11,2;UBERON:0000075,1.10e-10,16;UBERON:0005629,5.08e-10,2;UBERON:0005358,5.08e-10,2;UBERON:0001886,5.08e-10,2;UBERON:0004086,5.08e-10,2;UBERON:0005282,5.08e-10,2;UBERON:0005281,5.08e-10,2;UBERON:0002418,9.13e-08,3;UBERON:0004755,9.13e-08,3;UBERON:0007846,2.04e-07,3;UBERON:0000043,2.04e-07,3;UBERON:0007845,2.04e-07,3;UBERON:0006915,3.83e-07,3;UBERON:0007616,3.83e-07,3;UBERON:0002217,3.83e-07,3;UBERON:0002018,3.83e-07,3 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0.783556884599516,0,0,0,0,6.55961670688247,11.2675107747491,0,0,0,0,0.246242116153576,2.04000691244253,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,1.42506371870624,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0.443067789167242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289648807765598,2.43806866313962,0,0,0,0.50133791063589,0.579386075843295,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,0,0,0.35576626268671,0,0.402829317109147,0,0.488124115096339,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0.622422070799533,0.134710672069688,0.163461903113459,1.66493170409425,1.15235184896,0.234321431833797,0.312160076830321,0,0.597794722207204,0.117434498643765,0.323745888736263,0.280901613404497,1.22492502752936,1.84251475967652,4.95963749643674,0,0,0,0,0.505008341862199,1.37630371859161,0.277064115484183,0.877955241761676,0,0.300476117813194,0,0,0,0,0,0,0.515281080091258,0,0.337552664482532,0.0974370051611986,0,0,2.10139873864455,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0.464367928031979,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.336393253036082,0.43596006883328,0,0,7.15312891703765,0,0,0,0.257207374262142,0,0.532844358032199,0.285955987316295,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,2.85273810081437,0.289562613335158,1.02738161275192,0.179060963239896,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,8.34302143690151,9.50323990013386,6.23909554509392,0,0.178428988797162,0,0,0.300946099727719,2.27407504055985,1.03473071292505,0,0,0.347534457872331,7.63624514104688,6.51972505240626,0,0,0.213455115606889,0,0,0,0,0,0.280660094433074,0,0,0,1.48418066444991,0,0.355123450626254,0.0821271560138091,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.48335359146061,0.462145851343933,0.767518373630648,0.275673144969061,0.751941714077915,0.725083469571143,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0.42793898803392,0.95460974377781,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.282810863907425,3.39024349860728,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,1.05553817648832,3.95153871551882,0.75894634753143,1.39973888097993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69338866179106,0.324621940274555,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0.140669416410513,0,0,1.26675244876796,0.996239941255349,0.276283915531148,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0.0874599999961957,2.17499872630438,0,0,0,0,0,0,0,0,0,0.552896299656123,0.295547618953547,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0.19566461893209,0,0.394584402849391,0,0,1.70603764996917,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0.698906672968121,0.859930162358083,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0.316553979779393,0,0,0.213452994739353,0,0,0,0,0,0.248505071130865,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0,0.229160424011684,0.717873024576814,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.121499113316049,0,0.157611414598396,0.104909176269996,0,0,0,0.714695326373367,0.662091970365432,0,0.542999601753713,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0.26446520348538,0,0,0.533937062838473,0.471612915298998,0,0.496166021811951,0,0,0,0,0,0.612691153526923,0,0,0,0,0.1251909307065,1.72022758707021,0.332787154610557,0.372578417648301,0,0.249960815924213,0.151649117541648,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,6.22867855117575,0.228840068396924,0.151230923763239,0.621748802331122,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0.567515953566836,0.368211900503681,0,0,0,0.107824811396682,0,0,0,0,0.619678821295011,0,0,0,0,0.705351887381368,0.6124909547064,0.192687675289379,0,0,0.615349092722265,0,0,0.161475645631851,0,0,0,0,0,0,0.690359926060101,0.198916222116275,0,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0,0,0,0.992422356778588,0,0.127762427639595,0,0,0,0.227662191351298,0,0,0,0.0679697329768317,0.197318320688547,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0,0.801711364730253,0.207216164163037,0.85359238546975,1.38251932362818,0,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,1.29485767437579,0.205325613712494,0,0,0,0,0,0,0,0,0,0.218559560503957,0.470317296361523,0.980593287015622,0,0,0.594092800654172,0.4226557275834,0,0.281951753939561,0.193373663920732,0,0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| ||
|short_description=p5@SNED1 | |||
}} | }} |
Latest revision as of 09:16, 16 September 2015
Short description: | p5@SNED1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SNED1_5end |
Coexpression cluster: | C1156_Nucleus_Anulus_Mesenchymal_tenocyte_Pericytes_mesenchymal_Synoviocyte |
Association with transcript: | -451bp_to_ENST00000310397, ENST00000342631, ENST00000401884, ENST00000405547, NM_001080437, uc002wah.1_5end |
EntrezGene: | SNED1 |
HGNC: | 24696 |
UniProt: | Q8TER0B5MEF5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 5.91e-16 | 3 |
annulus pulposus cell | 2.98e-11 | 2 |
central nervous system pericyte | 3.64e-11 | 2 |
fibroblast of choroid plexus | 5.08e-10 | 2 |
fibroblast of gingiva | 5.04e-09 | 5 |
fibrocyte | 2.04e-07 | 3 |
tendon cell | 2.04e-07 | 3 |
synovial cell | 3.83e-07 | 3 |