FFCP PHASE1:Hg19::chr8:130798890..130798901,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56169 | |EntrezGene=56169 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7151 | |HGNC=7151 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BYG8 | |UniProt=Q9BYG8 | ||
|association_with_transcript=232bp_to_ENST00000276708,NM_031415,uc003ysr.2_5end | |association_with_transcript=232bp_to_ENST00000276708,NM_031415,uc003ysr.2_5end | ||
|cluster_id=chr8:130798890..130798901,- | |||
|coexpression_cluster_id=C4728 | |||
|description=CAGE_peak_3_at_GSDMC_5end | |description=CAGE_peak_3_at_GSDMC_5end | ||
|id=chr8:130798890..130798901,- | |id=chr8:130798890..130798901,- | ||
|ontology_enrichment_celltype=CL:0000066!6.32e-18!254;CL:0002076!3.74e-15!43;CL:0002159!4.02e-15!13;CL:0000076!1.42e-13!62;CL:0002251!1.90e-13!21;CL:0000223!2.41e-11!59;CL:0002621!3.13e-11!3;CL:0002166!9.45e-11!3;CL:0000240!2.67e-09!6;CL:0000311!2.67e-09!6;CL:0000079!2.67e-09!6;CL:0000237!2.67e-09!6;CL:0000036!2.67e-09!6;CL:0000357!2.67e-09!6;CL:0000114!2.67e-09!6;CL:0000362!7.68e-07!8 | |ontology_enrichment_celltype=CL:0000066!6.32e-18!254;CL:0002076!3.74e-15!43;CL:0002159!4.02e-15!13;CL:0000076!1.42e-13!62;CL:0002251!1.90e-13!21;CL:0000223!2.41e-11!59;CL:0002621!3.13e-11!3;CL:0002166!9.45e-11!3;CL:0000240!2.67e-09!6;CL:0000311!2.67e-09!6;CL:0000079!2.67e-09!6;CL:0000237!2.67e-09!6;CL:0000036!2.67e-09!6;CL:0000357!2.67e-09!6;CL:0000114!2.67e-09!6;CL:0000362!7.68e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002621;2.28e-85;3!CL:0000240;1.42e-42;6!CL:0000311;1.42e-42;6!CL:0000079;1.42e-42;6!CL:0000237;1.42e-42;6!CL:0002336;2.73e-29;1!CL:0002261;2.73e-29;1!CL:0002170;2.73e-29;1!CL:0000312;2.02e-23;5!CL:0002251;3.43e-23;20!CL:0002535;2.21e-15;2!CL:0000362;1.69e-13;9!CL:0002076;2.30e-11;42!CL:0002159;4.95e-09;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,2.28e-85,3;CL:0000240,1.33e-42,6;CL:0000311,1.33e-42,6;CL:0000079,1.33e-42,6;CL:0000237,1.33e-42,6;CL:0000036,1.33e-42,6;CL:0000357,1.33e-42,6;CL:0000114,1.33e-42,6;CL:0002336,1.78e-29,1;CL:0002261,1.78e-29,1;CL:0002170,1.78e-29,1;CL:0000312,2.27e-23,5;CL:0002251,3.15e-23,20;CL:0002535,2.37e-15,2;CL:0000362,1.80e-13,9;CL:0002076,2.33e-11,42;CL:0002159,5.15e-09,14;CL:0000223,2.37e-08,58;CL:0000076,1.25e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000357;1.42e-42;6!CL:0000114;1.42e-42;6 | |||
|ontology_enrichment_disease=DOID:1749!1.23e-16!14 | |ontology_enrichment_disease=DOID:1749!1.23e-16!14 | ||
|ontology_enrichment_disease_v019=DOID:4362;6.21e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,6.39e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001004!2.98e-15!72;UBERON:0000161!3.12e-14!35;UBERON:0004119!3.39e-14!169;UBERON:0000925!3.39e-14!169;UBERON:0006595!3.39e-14!169;UBERON:0000166!1.98e-13!21;UBERON:0000165!1.02e-11!28;UBERON:0000930!1.02e-11!28;UBERON:0001949!3.13e-11!3;UBERON:0001007!7.83e-11!155;UBERON:0001555!7.83e-11!155;UBERON:0007026!7.83e-11!155;UBERON:0003729!2.37e-10!5;UBERON:0000065!1.95e-09!53;UBERON:0000344!9.55e-09!12;UBERON:0003102!2.72e-08!95;UBERON:0001708!3.79e-08!4;UBERON:0001704!3.79e-08!4;UBERON:0005911!1.19e-07!82;UBERON:0003343!1.90e-07!4;UBERON:0004785!1.90e-07!4;UBERON:0000974!3.33e-07!10;UBERON:0003127!4.65e-07!2;UBERON:0001444!4.79e-07!48 | |ontology_enrichment_uberon=UBERON:0001004!2.98e-15!72;UBERON:0000161!3.12e-14!35;UBERON:0004119!3.39e-14!169;UBERON:0000925!3.39e-14!169;UBERON:0006595!3.39e-14!169;UBERON:0000166!1.98e-13!21;UBERON:0000165!1.02e-11!28;UBERON:0000930!1.02e-11!28;UBERON:0001949!3.13e-11!3;UBERON:0001007!7.83e-11!155;UBERON:0001555!7.83e-11!155;UBERON:0007026!7.83e-11!155;UBERON:0003729!2.37e-10!5;UBERON:0000065!1.95e-09!53;UBERON:0000344!9.55e-09!12;UBERON:0003102!2.72e-08!95;UBERON:0001708!3.79e-08!4;UBERON:0001704!3.79e-08!4;UBERON:0005911!1.19e-07!82;UBERON:0003343!1.90e-07!4;UBERON:0004785!1.90e-07!4;UBERON:0000974!3.33e-07!10;UBERON:0003127!4.65e-07!2;UBERON:0001444!4.79e-07!48 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;2.28e-85;3!UBERON:0003929;3.40e-37;7!UBERON:0003729;2.68e-35;13!UBERON:0003350;1.15e-32;8!UBERON:0001828;1.15e-32;8!UBERON:0000344;3.43e-23;20!UBERON:0010371;4.30e-23;31!UBERON:0000486;4.42e-22;12!UBERON:0000165;9.64e-17;28!UBERON:0006955;2.21e-15;2!UBERON:0004801;2.21e-15;2!UBERON:0000161;3.02e-14;19!UBERON:0000166;3.02e-14;19!UBERON:0004807;2.09e-12;22!UBERON:0001555;6.69e-09;54!UBERON:0001003;1.71e-08;15!UBERON:0007376;1.71e-08;15!UBERON:0004923;2.93e-08;55!UBERON:0005911;1.83e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.28e-85,3;UBERON:0003729,2.34e-35,13;UBERON:0003350,1.15e-32,8;UBERON:0001828,1.15e-32,8;UBERON:0000344,3.15e-23,20;UBERON:0000165,3.28e-16,29;UBERON:0000930,3.28e-16,29;UBERON:0006955,2.37e-15,2;UBERON:0004801,2.37e-15,2;UBERON:0000166,2.09e-12,22;UBERON:0003102,1.51e-10,99;UBERON:0004807,6.71e-10,28;UBERON:0001444,8.37e-10,49;UBERON:0000033,1.24e-08,56;UBERON:0001003,1.78e-08,15;UBERON:0007376,1.78e-08,15;UBERON:0007383,1.78e-08,15;UBERON:0000161,7.59e-08,36;UBERON:0000153,7.72e-08,62;UBERON:0007811,7.72e-08,62;UBERON:0004923,2.18e-07,66;UBERON:0010371,4.60e-07,104 | |||
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| ||
|short_description=p3@GSDMC | |short_description=p3@GSDMC | ||
}} | }} |
Latest revision as of 09:03, 16 September 2015
Short description: | p3@GSDMC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GSDMC_5end |
Coexpression cluster: | C4728_immature_Gingival_malignant_epidermoid_esophagus_spleen_Mallassezderived |
Association with transcript: | 232bp_to_ENST00000276708, NM_031415, uc003ysr.2_5end |
EntrezGene: | GSDMC |
HGNC: | 7151 |
UniProt: | Q9BYG8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 2.28e-85 | 3 |
stratified squamous epithelial cell | 1.33e-42 | 6 |
keratin accumulating cell | 1.33e-42 | 6 |
stratified epithelial cell | 1.33e-42 | 6 |
keratinizing barrier epithelial cell | 1.33e-42 | 6 |
epithelial fate stem cell | 1.33e-42 | 6 |
stratified epithelial stem cell | 1.33e-42 | 6 |
surface ectodermal cell | 1.33e-42 | 6 |
buccal mucosa cell | 1.78e-29 | 1 |
endothelial cell of viscerocranial mucosa | 1.78e-29 | 1 |
keratinized cell of the oral mucosa | 1.78e-29 | 1 |
keratinocyte | 2.27e-23 | 5 |
epithelial cell of alimentary canal | 3.15e-23 | 20 |
epithelial cell of cervix | 2.37e-15 | 2 |
epidermal cell | 1.80e-13 | 9 |
endo-epithelial cell | 2.33e-11 | 42 |
general ecto-epithelial cell | 5.15e-09 | 14 |
endodermal cell | 2.37e-08 | 58 |
squamous epithelial cell | 1.25e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.28e-85 | 3 |
mouth mucosa | 2.34e-35 | 13 |
epithelium of mucosa | 1.15e-32 | 8 |
gingiva | 1.15e-32 | 8 |
mucosa | 3.15e-23 | 20 |
mouth | 3.28e-16 | 29 |
stomodeum | 3.28e-16 | 29 |
uterine epithelium | 2.37e-15 | 2 |
cervix epithelium | 2.37e-15 | 2 |
oral opening | 2.09e-12 | 22 |
surface structure | 1.51e-10 | 99 |
respiratory system epithelium | 6.71e-10 | 28 |
subdivision of head | 8.37e-10 | 49 |
head | 1.24e-08 | 56 |
skin epidermis | 1.78e-08 | 15 |
outer epithelium | 1.78e-08 | 15 |
enveloping layer of ectoderm | 1.78e-08 | 15 |
orifice | 7.59e-08 | 36 |
anterior region of body | 7.72e-08 | 62 |
craniocervical region | 7.72e-08 | 62 |
organ component layer | 2.18e-07 | 66 |
ecto-epithelium | 4.60e-07 | 104 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 6.39e-07 | 5 |