FFCP PHASE1:Hg19::chr17:55162595..55162624,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8165 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=367 | |||
|TSSclassifier=strong | |||
|UniProt=Q92667 | |||
|association_with_transcript=42bp_to_ENST00000314126,NM_003488,uc002iux.2_5end | |||
|cluster_id=chr17:55162595..55162624,+ | |||
|description=CAGE_peak_1_at_AKAP1_5end | |||
|id=chr17:55162595..55162624,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.68e-10!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.89e-10,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.01e-07;29 | |||
|ontology_enrichment_disease=DOID:162!3.74e-15!235;DOID:305!9.94e-15!106;DOID:14566!3.38e-14!239;DOID:0050687!5.48e-12!143;DOID:0050686!4.94e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.71e-15,235;DOID:305,1.02e-14,106;DOID:14566,3.36e-14,239;DOID:0050687,5.57e-12,143;DOID:0050686,4.83e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.35e-21!115;UBERON:0004921!3.60e-11!129;UBERON:0004185!3.60e-11!129;UBERON:0001041!8.39e-10!98;UBERON:0001007!2.49e-09!155;UBERON:0001555!2.49e-09!155;UBERON:0007026!2.49e-09!155;UBERON:0000077!3.13e-09!130;UBERON:0004119!3.19e-09!169;UBERON:0000925!3.19e-09!169;UBERON:0006595!3.19e-09!169;UBERON:0001049!3.33e-09!57;UBERON:0005068!3.33e-09!57;UBERON:0006241!3.33e-09!57;UBERON:0007135!3.33e-09!57;UBERON:0000955!1.79e-08!69;UBERON:0006238!1.79e-08!69;UBERON:0001017!6.86e-08!82;UBERON:0003080!7.21e-08!42;UBERON:0002616!8.81e-08!59;UBERON:0000073!1.12e-07!94;UBERON:0001016!1.12e-07!94;UBERON:0002780!1.65e-07!41;UBERON:0001890!1.65e-07!41;UBERON:0006240!1.65e-07!41;UBERON:0005743!2.07e-07!86;UBERON:0000064!4.55e-07!219 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.73e-21,114;UBERON:0011216,8.21e-15,223;UBERON:0004921,8.62e-11,118;UBERON:0001041,1.62e-09,87;UBERON:0001049,7.48e-09,56;UBERON:0005068,7.48e-09,56;UBERON:0006241,7.48e-09,56;UBERON:0007135,7.48e-09,56;UBERON:0000073,8.62e-09,53;UBERON:0002616,8.62e-09,53;UBERON:0001007,1.48e-08,145;UBERON:0001555,1.48e-08,145;UBERON:0007026,1.48e-08,145;UBERON:0004119,1.80e-08,160;UBERON:0000925,1.80e-08,160;UBERON:0006595,1.80e-08,160;UBERON:0000955,3.76e-08,68;UBERON:0006238,3.76e-08,68;UBERON:0001016,7.72e-08,89;UBERON:0001017,1.36e-07,81;UBERON:0002780,1.65e-07,41;UBERON:0001890,1.65e-07,41;UBERON:0003080,1.65e-07,41;UBERON:0006240,1.65e-07,41;UBERON:0005177,8.30e-07,101 | |||
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| |||
|short_description=p1@AKAP1 | |||
}} |
Latest revision as of 08:38, 16 September 2015
Short description: | p1@AKAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AKAP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 42bp_to_ENST00000314126, NM_003488, uc002iux.2_5end |
EntrezGene: | AKAP1 |
HGNC: | 367 |
UniProt: | Q92667 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.89e-10 | 253 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.73e-21 | 114 |
organ system subdivision | 8.21e-15 | 223 |
subdivision of digestive tract | 8.62e-11 | 118 |
foregut | 1.62e-09 | 87 |
neural tube | 7.48e-09 | 56 |
neural rod | 7.48e-09 | 56 |
future spinal cord | 7.48e-09 | 56 |
neural keel | 7.48e-09 | 56 |
regional part of nervous system | 8.62e-09 | 53 |
regional part of brain | 8.62e-09 | 53 |
digestive system | 1.48e-08 | 145 |
digestive tract | 1.48e-08 | 145 |
primitive gut | 1.48e-08 | 145 |
endoderm-derived structure | 1.80e-08 | 160 |
endoderm | 1.80e-08 | 160 |
presumptive endoderm | 1.80e-08 | 160 |
brain | 3.76e-08 | 68 |
future brain | 3.76e-08 | 68 |
nervous system | 7.72e-08 | 89 |
central nervous system | 1.36e-07 | 81 |
regional part of forebrain | 1.65e-07 | 41 |
forebrain | 1.65e-07 | 41 |
anterior neural tube | 1.65e-07 | 41 |
future forebrain | 1.65e-07 | 41 |
trunk region element | 8.30e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.71e-15 | 235 |
carcinoma | 1.02e-14 | 106 |
disease of cellular proliferation | 3.36e-14 | 239 |
cell type cancer | 5.57e-12 | 143 |
organ system cancer | 4.83e-07 | 137 |