FFCP PHASE1:Hg19::chr4:156824840..156824858,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:156824840..156824858,+
|short_description=p1@TDO2
|description=CAGE_peak_1_at_TDO2_5end
|association_with_transcript=0bp_to_ENST00000509738,ENST00000536354...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6999 | |EntrezGene=6999 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11708 | |HGNC=11708 | ||
|TSSclassifier=strong | |||
|UniProt=P48775 | |UniProt=P48775 | ||
|association_with_transcript=0bp_to_ENST00000509738,ENST00000536354,NM_005651,uc003ipf.1_5end | |||
|cluster_id=chr4:156824840..156824858,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_TDO2_5end | |||
|id=chr4:156824840..156824858,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001155!4.02e-10!9;UBERON:0007023!7.87e-09!115;UBERON:0000059!7.91e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;9.86e-15;17!UBERON:0005409;3.66e-13;22!UBERON:0001155;1.60e-12;9!UBERON:0000059;4.79e-10;11!UBERON:0004921;6.56e-09;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.05e-15,25;UBERON:0000160,8.66e-15,17;UBERON:0001155,1.24e-12,9;UBERON:0004921,3.51e-10,118;UBERON:0000059,3.91e-10,11;UBERON:0001007,5.20e-07,145;UBERON:0001555,5.20e-07,145;UBERON:0007026,5.20e-07,145 | |||
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| ||
|short_description=p1@TDO2 | |||
}} | }} |
Latest revision as of 08:31, 16 September 2015
Short description: | p1@TDO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TDO2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000509738, ENST00000536354, NM_005651, uc003ipf.1_5end |
EntrezGene: | TDO2 |
HGNC: | 11708 |
UniProt: | P48775 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.05e-15 | 25 |
intestine | 8.66e-15 | 17 |
colon | 1.24e-12 | 9 |
subdivision of digestive tract | 3.51e-10 | 118 |
large intestine | 3.91e-10 | 11 |
digestive system | 5.20e-07 | 145 |
digestive tract | 5.20e-07 | 145 |
primitive gut | 5.20e-07 | 145 |