FFCP PHASE1:Hg19::chr20:43192823..43192835,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:43192823..43192835,+
|short_description=p5@PKIG
|description=CAGE_peak_5_at_PKIG_5end
|association_with_transcript=-6bp_to_ENST00000477390_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11142 | |EntrezGene=11142 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9019 | |HGNC=9019 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_ENST00000477390_5end | |||
|cluster_id=chr20:43192823..43192835,+ | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_5_at_PKIG_5end | |||
|id=chr20:43192823..43192835,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.49e-24;2!UBERON:0009143;2.78e-13;1!UBERON:0001045;4.77e-13;1!UBERON:0005754;4.77e-13;1!UBERON:0006242;8.15e-13;1!UBERON:0006603;1.20e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.34e-29!115;UBERON:0006947!5.62e-20!3;UBERON:0004054!5.62e-20!3;UBERON:0005904!3.99e-15!4;UBERON:0003127!3.94e-13!2;UBERON:0003135!1.63e-09!11;UBERON:0004175!9.42e-09!25;UBERON:0006834!5.96e-08!1;UBERON:0000996!6.80e-08!1;UBERON:0001154!7.26e-08!1;UBERON:0001153!7.26e-08!1;UBERON:0000998!7.76e-08!1;UBERON:0006868!7.76e-08!1;UBERON:0001000!8.28e-08!1;UBERON:0005352!8.28e-08!1;UBERON:0001301!9.44e-08!1;UBERON:0005409!9.86e-08!35;UBERON:0000160!1.33e-07!27;UBERON:0002146!1.91e-07!1;UBERON:0005623!1.91e-07!1;UBERON:0003133!2.39e-07!48;UBERON:0005156!2.47e-07!59;UBERON:0000990!2.47e-07!59;UBERON:0002336!2.98e-07!1;UBERON:0001018!2.98e-07!1;UBERON:0002473!2.98e-07!1;UBERON:0005340!2.98e-07!1;UBERON:0002316!2.98e-07!1;UBERON:0003544!2.98e-07!1;UBERON:0001020!2.98e-07!1;UBERON:0005970!2.98e-07!1;UBERON:0002437!2.98e-07!1;UBERON:0003101!3.84e-07!22;UBERON:0000079!3.84e-07!22;UBERON:0001155!5.36e-07!9;UBERON:0004921!9.57e-07!129;UBERON:0004185!9.57e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;2.68e-35;3!UBERON:0004054;2.68e-35;3!UBERON:0005904;1.14e-26;4!UBERON:0003135;4.30e-17;11!UBERON:0004175;6.84e-14;21!UBERON:0006834;2.78e-13;1!UBERON:0003101;3.39e-13;22!UBERON:0000079;3.39e-13;22!UBERON:0000996;3.54e-13;1!UBERON:0001154;4.77e-13;1!UBERON:0001000;4.77e-13;1!UBERON:0000998;4.77e-13;1!UBERON:0001153;4.77e-13;1!UBERON:0006868;4.77e-13;1!UBERON:0009854;4.77e-13;1!UBERON:0005352;4.77e-13;1!UBERON:0001301;8.15e-13;1!UBERON:0001155;2.92e-12;9!UBERON:0000058;4.70e-11;10!UBERON:0000160;1.40e-10;17!UBERON:0000059;3.91e-10;11!UBERON:0005409;2.51e-08;22!UBERON:0004921;4.62e-08;33!UBERON:0001255;2.28e-07;2!UBERON:0001556;2.28e-07;2!UBERON:0007023;9.18e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,2.53e-35,3;UBERON:0004054,2.53e-35,3;UBERON:0005904,1.09e-26,4;UBERON:0007023,2.14e-24,114;UBERON:0003135,4.68e-17,11;UBERON:0006834,2.95e-13,1;UBERON:0003101,3.57e-13,22;UBERON:0000079,3.57e-13,22;UBERON:0000996,3.76e-13,1;UBERON:0001154,4.23e-13,1;UBERON:0001153,4.23e-13,1;UBERON:0001045,4.23e-13,1;UBERON:0000998,4.77e-13,1;UBERON:0006868,4.77e-13,1;UBERON:0001000,5.38e-13,1;UBERON:0005352,5.38e-13,1;UBERON:0001301,6.82e-13,1;UBERON:0001155,2.92e-12,9;UBERON:0004175,1.17e-11,25;UBERON:0000160,1.38e-10,17;UBERON:0003064,1.70e-10,28;UBERON:0001046,2.79e-10,19;UBERON:0000059,3.91e-10,11;UBERON:0005156,4.24e-09,59;UBERON:0000990,4.24e-09,59;UBERON:0003133,2.18e-08,48;UBERON:0000162,2.88e-08,14;UBERON:0001353,2.88e-08,14;UBERON:0000163,2.88e-08,14;UBERON:0006866,2.88e-08,14;UBERON:0000164,2.88e-08,14;UBERON:0000931,2.88e-08,14;UBERON:0004122,9.50e-08,15;UBERON:0005409,2.17e-07,25;UBERON:0001255,2.28e-07,2;UBERON:0001556,2.28e-07,2 | |||
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|short_description=p5@PKIG | |||
}} | }} |
Latest revision as of 08:20, 16 September 2015
Short description: | p5@PKIG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PKIG_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | -6bp_to_ENST00000477390_5end |
EntrezGene: | PKIG |
HGNC: | 9019 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 2.53e-35 | 3 |
internal male genitalia | 2.53e-35 | 3 |
duct of male reproductive system | 1.09e-26 | 4 |
adult organism | 2.14e-24 | 114 |
male reproductive organ | 4.68e-17 | 11 |
uterus or analog | 2.95e-13 | 1 |
male organism | 3.57e-13 | 22 |
male reproductive system | 3.57e-13 | 22 |
vagina | 3.76e-13 | 1 |
vermiform appendix | 4.23e-13 | 1 |
caecum | 4.23e-13 | 1 |
midgut | 4.23e-13 | 1 |
seminal vesicle | 4.77e-13 | 1 |
seminal fluid secreting gland | 4.77e-13 | 1 |
vas deferens | 5.38e-13 | 1 |
spermatic cord | 5.38e-13 | 1 |
epididymis | 6.82e-13 | 1 |
colon | 2.92e-12 | 9 |
internal genitalia | 1.17e-11 | 25 |
intestine | 1.38e-10 | 17 |
intermediate mesoderm | 1.70e-10 | 28 |
hindgut | 2.79e-10 | 19 |
large intestine | 3.91e-10 | 11 |
reproductive structure | 4.24e-09 | 59 |
reproductive system | 4.24e-09 | 59 |
reproductive organ | 2.18e-08 | 48 |
cloaca | 2.88e-08 | 14 |
anal region | 2.88e-08 | 14 |
embryonic cloaca | 2.88e-08 | 14 |
terminal part of digestive tract | 2.88e-08 | 14 |
primitive urogenital sinus | 2.88e-08 | 14 |
proctodeum | 2.88e-08 | 14 |
genitourinary system | 9.50e-08 | 15 |
gastrointestinal system | 2.17e-07 | 25 |
urinary bladder | 2.28e-07 | 2 |
lower urinary tract | 2.28e-07 | 2 |