FFCP PHASE1:Hg19::chr11:12217551..12217561,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9645 | |EntrezGene=9645 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24693 | |HGNC=24693 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=59bp_to_ENST00000527195,ENST00000532166_5end | |association_with_transcript=59bp_to_ENST00000527195,ENST00000532166_5end | ||
|cluster_id=chr11:12217551..12217561,+ | |||
|coexpression_cluster_id=C1618 | |||
|description=CAGE_peak_22_at_MICAL2_5end | |description=CAGE_peak_22_at_MICAL2_5end | ||
|id=chr11:12217551..12217561,+ | |id=chr11:12217551..12217561,+ | ||
|ontology_enrichment_celltype=CL:0000084!2.33e-40!25;CL:0000827!2.33e-40!25;CL:0000791!2.29e-28!18;CL:0000789!2.29e-28!18;CL:0002420!2.29e-28!18;CL:0002419!2.29e-28!18;CL:0000790!2.29e-28!18;CL:0000838!3.52e-27!52;CL:0000542!1.45e-26!53;CL:0000051!1.45e-26!53;CL:0000625!3.38e-21!11;CL:0000738!3.11e-15!140;CL:0002087!1.81e-13!119;CL:0000623!1.76e-12!3;CL:0000825!1.76e-12!3;CL:0000988!4.88e-12!182;CL:0002031!1.81e-11!124;CL:0000037!3.97e-11!172;CL:0000566!3.97e-11!172;CL:0002032!7.79e-11!165;CL:0000837!7.79e-11!165;CL:0000624!1.18e-10!6 | |ontology_enrichment_celltype=CL:0000084!2.33e-40!25;CL:0000827!2.33e-40!25;CL:0000791!2.29e-28!18;CL:0000789!2.29e-28!18;CL:0002420!2.29e-28!18;CL:0002419!2.29e-28!18;CL:0000790!2.29e-28!18;CL:0000838!3.52e-27!52;CL:0000542!1.45e-26!53;CL:0000051!1.45e-26!53;CL:0000625!3.38e-21!11;CL:0000738!3.11e-15!140;CL:0002087!1.81e-13!119;CL:0000623!1.76e-12!3;CL:0000825!1.76e-12!3;CL:0000988!4.88e-12!182;CL:0002031!1.81e-11!124;CL:0000037!3.97e-11!172;CL:0000566!3.97e-11!172;CL:0002032!7.79e-11!165;CL:0000837!7.79e-11!165;CL:0000624!1.18e-10!6 | ||
|ontology_enrichment_celltype_v019=CL:0000084;6.69e-11;25!CL:0000623;1.04e-10;3!CL:0000542;3.98e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,7.16e-11,25;CL:0000827,7.16e-11,25;CL:0000623,1.09e-10,3;CL:0000825,1.09e-10,3;CL:0000838,3.68e-09,52;CL:0000542,5.37e-09,53;CL:0000051,5.37e-09,53 | |||
|ontology_enrichment_development_v019=CL:0000051;3.98e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;9.98e-30;1!DOID:0060061;9.98e-30;1!DOID:8691;9.98e-30;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.33e-29,1;DOID:0060061,1.33e-29,1;DOID:8691,1.33e-29,1 | |||
|ontology_enrichment_uberon=UBERON:0002370!8.23e-10!4;UBERON:0005058!8.23e-10!4;UBERON:0009113!8.23e-10!4;UBERON:0003295!8.23e-10!4;UBERON:0005562!8.23e-10!4;UBERON:0004177!3.67e-09!7 | |ontology_enrichment_uberon=UBERON:0002370!8.23e-10!4;UBERON:0005058!8.23e-10!4;UBERON:0009113!8.23e-10!4;UBERON:0003295!8.23e-10!4;UBERON:0005562!8.23e-10!4;UBERON:0004177!3.67e-09!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.51e-57;2!UBERON:0005058;1.51e-57;2!UBERON:0009113;1.51e-57;2!UBERON:0004177;9.08e-24;5!UBERON:0005057;9.08e-24;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.78e-29,4;UBERON:0005058,1.78e-29,4;UBERON:0009113,1.78e-29,4;UBERON:0003295,1.78e-29,4;UBERON:0005562,1.78e-29,4;UBERON:0003351,4.86e-20,6;UBERON:0004177,2.46e-17,7;UBERON:0005057,2.46e-17,7;UBERON:0000974,1.89e-12,10;UBERON:0003408,1.89e-12,10;UBERON:0001042,1.89e-12,10;UBERON:0009145,1.89e-12,10;UBERON:0006562,2.07e-11,11;UBERON:0009722,2.07e-11,11;UBERON:0007690,2.07e-11,11;UBERON:0008814,2.44e-07,18;UBERON:0001557,5.34e-07,19 | |||
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| ||
|short_description=p22@MICAL2 | |short_description=p22@MICAL2 | ||
}} | }} |
Latest revision as of 08:08, 16 September 2015
Short description: | p22@MICAL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_MICAL2_5end |
Coexpression cluster: | C1618_mycosis_CD4_thymus_CD8_Natural_chronic_Basophils |
Association with transcript: | 59bp_to_ENST00000527195, ENST00000532166_5end |
EntrezGene: | MICAL2 |
HGNC: | 24693 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 7.16e-11 | 25 |
pro-T cell | 7.16e-11 | 25 |
natural killer cell | 1.09e-10 | 3 |
pro-NK cell | 1.09e-10 | 3 |
lymphoid lineage restricted progenitor cell | 3.68e-09 | 52 |
lymphocyte | 5.37e-09 | 53 |
common lymphoid progenitor | 5.37e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.78e-29 | 4 |
hemolymphoid system gland | 1.78e-29 | 4 |
thymic region | 1.78e-29 | 4 |
pharyngeal gland | 1.78e-29 | 4 |
thymus primordium | 1.78e-29 | 4 |
pharyngeal epithelium | 4.86e-20 | 6 |
hemopoietic organ | 2.46e-17 | 7 |
immune organ | 2.46e-17 | 7 |
neck | 1.89e-12 | 10 |
gland of gut | 1.89e-12 | 10 |
chordate pharynx | 1.89e-12 | 10 |
pharyngeal region of foregut | 1.89e-12 | 10 |
pharynx | 2.07e-11 | 11 |
entire pharyngeal arch endoderm | 2.07e-11 | 11 |
early pharyngeal endoderm | 2.07e-11 | 11 |
pharyngeal arch system | 2.44e-07 | 18 |
upper respiratory tract | 5.34e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.33e-29 | 1 |
cutaneous T cell lymphoma | 1.33e-29 | 1 |
mycosis fungoides | 1.33e-29 | 1 |