FFCP PHASE1:Hg19::chr1:116311296..116311307,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:116311296..116311307,-
|short_description=p4@CASQ2
|description=CAGE_peak_4_at_CASQ2_5end
|association_with_transcript=27bp_to_ENST00000456138_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=845 | |EntrezGene=845 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1513 | |HGNC=1513 | ||
|TSSclassifier=strong | |||
|UniProt=B4DIB0 | |UniProt=B4DIB0 | ||
|association_with_transcript=27bp_to_ENST00000456138_5end | |||
|cluster_id=chr1:116311296..116311307,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_4_at_CASQ2_5end | |||
|id=chr1:116311296..116311307,- | |||
|ontology_enrichment_celltype=CL:0000188!2.46e-09!9 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;5.98e-15;4!UBERON:0007284;5.98e-15;4!UBERON:0006603;5.55e-11;65!UBERON:0003104;9.40e-09;31!UBERON:0010226;4.28e-08;1!UBERON:0010227;4.89e-08;1!UBERON:0004140;7.03e-08;1!UBERON:0000358;1.07e-07;1!UBERON:0009143;2.62e-07;1!UBERON:0006242;2.62e-07;1!UBERON:0004874;2.62e-07;1 | |||
|ontology_enrichment_disease=DOID:114!7.61e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:114;3.74e-14;2!DOID:178;8.84e-08;1!DOID:326;8.84e-08;1!DOID:3978;8.84e-08;1!DOID:3394;8.84e-08;1!DOID:5844;8.84e-08;1!DOID:1287;1.69e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.74e-14,2;DOID:178,8.84e-08,1;DOID:326,8.84e-08,1;DOID:3978,8.84e-08,1;DOID:3394,8.84e-08,1;DOID:5844,8.84e-08,1;DOID:1287,1.69e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.42e-52!115;UBERON:0004151!2.17e-09!3;UBERON:0003978!3.24e-09!3;UBERON:0009751!3.24e-09!3;UBERON:0000946!3.24e-09!3;UBERON:0002523!3.24e-09!3;UBERON:0005983!3.24e-09!3;UBERON:0002165!3.24e-09!3;UBERON:0002062!3.24e-09!3;UBERON:0007280!3.24e-09!3;UBERON:0003103!4.56e-08!69;UBERON:0007100!6.57e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;3.58e-20;3!UBERON:0003978;9.67e-20;3!UBERON:0000946;9.67e-20;3!UBERON:0007100;1.27e-19;25!UBERON:0002081;8.11e-14;2!UBERON:0000341;9.52e-14;2!UBERON:0005090;9.52e-14;2!UBERON:0001630;9.52e-14;2!UBERON:0002133;1.64e-13;2!UBERON:0000948;4.01e-10;22!UBERON:0001134;6.94e-10;16!UBERON:0002036;6.94e-10;16!UBERON:0001723;1.49e-09;3!UBERON:0001033;1.49e-09;3!UBERON:0002084;4.28e-08;1!UBERON:0002082;4.28e-08;1!UBERON:0002079;4.89e-08;1!UBERON:0002146;5.77e-08;1!UBERON:0002426;5.77e-08;1!UBERON:0003831;5.77e-08;1!UBERON:0003898;5.77e-08;1!UBERON:0004830;5.77e-08;1!UBERON:0005623;5.77e-08;1!UBERON:0003830;5.77e-08;1!UBERON:0005175;5.77e-08;1!UBERON:0001774;5.77e-08;1!UBERON:0001103;5.77e-08;1!UBERON:0002135;1.01e-07;1!UBERON:0007029;1.15e-07;1!UBERON:0002134;1.80e-07;1!UBERON:0001389;1.80e-07;1!UBERON:0000026;1.80e-07;1!UBERON:0008784;1.80e-07;1!UBERON:0006058;1.80e-07;1!UBERON:0003663;1.80e-07;1!UBERON:0004256;1.80e-07;1!UBERON:0004708;1.80e-07;1!UBERON:0002101;1.80e-07;1!UBERON:0004709;1.80e-07;1!UBERON:0005208;1.80e-07;1!UBERON:0002529;1.80e-07;1!UBERON:0010538;1.80e-07;1!UBERON:0003661;1.80e-07;1!UBERON:0010890;1.80e-07;1!UBERON:0002471;1.80e-07;1!UBERON:0001383;1.80e-07;1!UBERON:0004145;1.80e-07;1!UBERON:0005946;1.80e-07;1!UBERON:0010758;1.80e-07;1!UBERON:0010707;1.80e-07;1!UBERON:0000978;1.80e-07;1!UBERON:0002103;1.80e-07;1!UBERON:0001665;1.80e-07;1!UBERON:0003823;1.80e-07;1!UBERON:0000154;1.80e-07;1!UBERON:0010709;1.80e-07;1!UBERON:0005965;1.80e-07;1!UBERON:0002078;1.80e-07;1!UBERON:0000989;2.62e-07;1!UBERON:0008811;2.62e-07;1!UBERON:0002385;6.26e-07;31!UBERON:0001015;6.26e-07;31!UBERON:0000383;6.26e-07;31 | |||
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| ||
|short_description=p4@CASQ2 | |||
}} | }} |
Latest revision as of 08:07, 16 September 2015
Short description: | p4@CASQ2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CASQ2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 27bp_to_ENST00000456138_5end |
EntrezGene: | CASQ2 |
HGNC: | 1513 |
UniProt: | B4DIB0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 3.74e-14 | 2 |
vascular disease | 8.84e-08 | 1 |
ischemia | 8.84e-08 | 1 |
extrinsic cardiomyopathy | 8.84e-08 | 1 |
myocardial ischemia | 8.84e-08 | 1 |
myocardial infarction | 8.84e-08 | 1 |
cardiovascular system disease | 1.69e-07 | 4 |