FFCP PHASE1:Hg19::chr14:81421355..81421379,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7253 | |EntrezGene=7253 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12373 | |HGNC=12373 | ||
|TSSclassifier=strong | |||
|UniProt=F5GYU5 | |UniProt=F5GYU5 | ||
|association_with_transcript=-7bp_to_ENST00000541158_5end | |association_with_transcript=-7bp_to_ENST00000541158_5end | ||
|cluster_id=chr14:81421355..81421379,+ | |||
|coexpression_cluster_id=C1733 | |||
|description=CAGE_peak_3_at_TSHR_5end | |description=CAGE_peak_3_at_TSHR_5end | ||
|id=chr14:81421355..81421379,+ | |id=chr14:81421355..81421379,+ | ||
|ontology_enrichment_celltype=CL:0000542!8.19e-09!53;CL:0000051!8.19e-09!53;CL:0000838!4.09e-08!52 | |ontology_enrichment_celltype=CL:0000542!8.19e-09!53;CL:0000051!8.19e-09!53;CL:0000838!4.09e-08!52 | ||
|ontology_enrichment_celltype_v019=CL:0000084;6.45e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,6.35e-07,25;CL:0000827,6.35e-07,25;CL:0000838,8.38e-07,52 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.10e-09;5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;1.01e-11;1!DOID:4960;1.01e-11;1!DOID:0060061;1.01e-11;1!DOID:0070004;1.01e-11;1!DOID:8691;1.01e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,8.64e-12,1;DOID:0060061,8.64e-12,1;DOID:8691,8.64e-12,1;DOID:4960,1.19e-11,1;DOID:0070004,1.19e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0001987!4.90e-08!4;UBERON:0004340!4.90e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.34e-22;2!UBERON:0005058;1.34e-22;2!UBERON:0009113;1.34e-22;2!UBERON:0000341;3.17e-22;2!UBERON:0002046;1.10e-09;5!UBERON:0004177;1.31e-09;5!UBERON:0005057;1.31e-09;5!UBERON:0000974;4.99e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,2.85e-22,2;UBERON:0000974,2.01e-17,10;UBERON:0009722,4.78e-16,11;UBERON:0007690,4.78e-16,11;UBERON:0002370,8.65e-12,4;UBERON:0005058,8.65e-12,4;UBERON:0009113,8.65e-12,4;UBERON:0003295,8.65e-12,4;UBERON:0005562,8.65e-12,4;UBERON:0008814,6.89e-10,18;UBERON:0002046,1.10e-09,5;UBERON:0004117,1.10e-09,5;UBERON:0007689,1.10e-09,5;UBERON:0007123,1.10e-09,5;UBERON:0003091,1.10e-09,5;UBERON:0003351,3.77e-08,6;UBERON:0004177,4.20e-07,7;UBERON:0005057,4.20e-07,7 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0.522371256399677,0,0,0,0.527533956456907,0,0,0,0,0,0,0.246242116153576,0,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,1.20118796110804,0.574752439954483,0,0.954053754535364,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0.411202997999018,0,0.32592226663359,0,0,0.334231370655521,2.3568472597987,1.55073726208535,6.22848886659536,0.640456598628376,0.650296737799391,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0.34362744548263,0,0.318565414324097,0,0,0.301150238155546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.29755719297581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0.106727557803444,0.303127571446259,1.66435439510497,0.907170879989041,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0.541892875087706,0.501689773854853,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.185803175125719,0,3.48595032407229,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0.890894042497916,0,0,0,0,0,0,0.19924798825107,0,0,0,0.615424027305347,0,0.0898683511473268,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0.694499979733169,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0,0,4.08773192782946,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.494255755786011,0.730953646538188,0.134802265961354,0,0,0.182454789215666,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0.332787154610557,0.248385611765534,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,2.59983614611409,0.106691729694141,2.06657975592979,0,0,0,0,0.383683113910955,0,0,0.764467467344097,0,0,0,0,0,0.315446980005013,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0.266107110487916,0.230467975111559,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596852325484105,0,0,0.329821550236287,0,0,0,0,0.245148321753905,0,0.196308467114945,0.297046400327086,2.113278637917,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0.631086248772738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62497769231668,9.76064169001335,16.6639387376896,13.9047360022722,0,22.0219167642451,18.392664195198,0.435433495793923,0,0.404112318087525,0.430333232356058,0.332660356546013,0,0,0,0,0,0.122241444182866,0.406896178315738,0,3.62292828463847,0 | |phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0.522371256399677,0,0,0,0.527533956456907,0,0,0,0,0,0,0.246242116153576,0,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,1.20118796110804,0.574752439954483,0,0.954053754535364,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0.411202997999018,0,0.32592226663359,0,0,0.334231370655521,2.3568472597987,1.55073726208535,6.22848886659536,0.640456598628376,0.650296737799391,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0.34362744548263,0,0.318565414324097,0,0,0.301150238155546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.29755719297581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0.106727557803444,0.303127571446259,1.66435439510497,0.907170879989041,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0.541892875087706,0.501689773854853,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.185803175125719,0,3.48595032407229,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0.890894042497916,0,0,0,0,0,0,0.19924798825107,0,0,0,0.615424027305347,0,0.0898683511473268,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0.694499979733169,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0,0,4.08773192782946,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.494255755786011,0.730953646538188,0.134802265961354,0,0,0.182454789215666,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0.332787154610557,0.248385611765534,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,2.59983614611409,0.106691729694141,2.06657975592979,0,0,0,0,0.383683113910955,0,0,0.764467467344097,0,0,0,0,0,0.315446980005013,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0.266107110487916,0.230467975111559,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596852325484105,0,0,0.329821550236287,0,0,0,0,0.245148321753905,0,0.196308467114945,0.297046400327086,2.113278637917,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0.631086248772738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62497769231668,9.76064169001335,16.6639387376896,13.9047360022722,0,22.0219167642451,18.392664195198,0.435433495793923,0,0.404112318087525,0.430333232356058,0.332660356546013,0,0,0,0,0,0.122241444182866,0.406896178315738,0,3.62292828463847,0 | ||
|short_description=p3@TSHR | |short_description=p3@TSHR | ||
}} | }} |
Latest revision as of 07:51, 16 September 2015
Short description: | p3@TSHR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TSHR_5end |
Coexpression cluster: | C1733_thymus_thyroid_throat_Hodgkin_CD4_vein_chronic |
Association with transcript: | -7bp_to_ENST00000541158_5end |
EntrezGene: | TSHR |
HGNC: | 12373 |
UniProt: | F5GYU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 6.35e-07 | 25 |
pro-T cell | 6.35e-07 | 25 |
lymphoid lineage restricted progenitor cell | 8.38e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
throat | 2.85e-22 | 2 |
neck | 2.01e-17 | 10 |
entire pharyngeal arch endoderm | 4.78e-16 | 11 |
early pharyngeal endoderm | 4.78e-16 | 11 |
thymus | 8.65e-12 | 4 |
hemolymphoid system gland | 8.65e-12 | 4 |
thymic region | 8.65e-12 | 4 |
pharyngeal gland | 8.65e-12 | 4 |
thymus primordium | 8.65e-12 | 4 |
pharyngeal arch system | 6.89e-10 | 18 |
thyroid gland | 1.10e-09 | 5 |
pharyngeal pouch | 1.10e-09 | 5 |
thyroid diverticulum | 1.10e-09 | 5 |
pharyngeal pouch 2 | 1.10e-09 | 5 |
thyroid primordium | 1.10e-09 | 5 |
pharyngeal epithelium | 3.77e-08 | 6 |
hemopoietic organ | 4.20e-07 | 7 |
immune organ | 4.20e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 8.64e-12 | 1 |
cutaneous T cell lymphoma | 8.64e-12 | 1 |
mycosis fungoides | 8.64e-12 | 1 |
bone marrow cancer | 1.19e-11 | 1 |
myeloma | 1.19e-11 | 1 |