FFCP PHASE1:Hg19::chr13:100633480..100633490,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:100633480..100633490,+ to FFCP PHASE1:Hg19::chr13:100633480..100633490,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=B4DP89 | |UniProt=B4DP89 | ||
|association_with_transcript=60bp_to_AK298232_5end | |||
|cluster_id=chr13:100633480..100633490,+ | |||
|coexpression_cluster_id=C1024 | |||
|description=CAGE_peak_3_at_AK298232_5end | |||
|id=chr13:100633480..100633490,+ | |||
|ontology_enrichment_celltype=CL:0002322!4.67e-10!5;CL:0000128!9.89e-09!7;CL:0000126!9.89e-09!7;CL:0000127!9.89e-09!7;CL:0002453!9.89e-09!7;CL:0002319!2.93e-08!25;CL:0000133!2.02e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002322;7.14e-33;5!CL:0002321;3.51e-27;15!CL:0002603;1.39e-20;3!CL:0002575;6.21e-15;2!CL:0000333;1.12e-12;5!CL:0000540;5.54e-11;6!CL:0000404;5.54e-11;6!CL:0000128;3.95e-09;7!CL:0000126;3.95e-09;7!CL:0000127;3.95e-09;7!CL:0002319;1.51e-08;25!CL:0000669;6.75e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.15e-33,5;CL:0002603,9.34e-21,3;CL:0002575,7.93e-15,2;CL:0000133,1.10e-13,59;CL:0000333,3.41e-11,41;CL:0000540,4.94e-11,6;CL:0000031,4.94e-11,6;CL:0000404,4.94e-11,6;CL:0000221,6.88e-11,72;CL:0000128,3.34e-09,7;CL:0000126,3.34e-09,7;CL:0000127,3.34e-09,7;CL:0002453,3.34e-09,7;CL:0002319,1.32e-08,25;CL:0000047,2.18e-08,8;CL:0000669,7.61e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.39e-21;3!CL:0000031;5.54e-11;6 | |||
|ontology_enrichment_disease=DOID:3095!9.47e-09!22;DOID:2994!9.47e-09!22;DOID:171!4.30e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:171;6.99e-11;10!DOID:169;1.19e-10;6!DOID:3371;2.11e-08;1!DOID:4549;2.11e-08;1!DOID:5861;2.11e-08;1!DOID:6496;2.11e-08;1!DOID:3095;2.21e-07;22!DOID:2994;2.21e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,6.15e-11,10;DOID:169,1.22e-10,6;DOID:3371,2.52e-08,1;DOID:4549,2.52e-08,1;DOID:5861,2.52e-08,1;DOID:6496,2.52e-08,1;DOID:3095,2.16e-07,22;DOID:2994,2.16e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.36e-30!82;UBERON:0000073!1.44e-30!94;UBERON:0001016!1.44e-30!94;UBERON:0005743!7.16e-30!86;UBERON:0002346!1.45e-24!90;UBERON:0001049!8.63e-23!57;UBERON:0005068!8.63e-23!57;UBERON:0006241!8.63e-23!57;UBERON:0007135!8.63e-23!57;UBERON:0000955!7.65e-21!69;UBERON:0006238!7.65e-21!69;UBERON:0003075!1.10e-20!86;UBERON:0007284!1.10e-20!86;UBERON:0002616!2.63e-20!59;UBERON:0000924!6.25e-18!173;UBERON:0006601!6.25e-18!173;UBERON:0003076!2.92e-17!15;UBERON:0003057!2.92e-17!15;UBERON:0004121!3.53e-15!169;UBERON:0000033!4.48e-14!123;UBERON:0004733!2.52e-13!12;UBERON:0002028!2.52e-13!12;UBERON:0007277!2.52e-13!12;UBERON:0000153!7.27e-13!129;UBERON:0007811!7.27e-13!129;UBERON:0002680!2.25e-12!9;UBERON:0001895!2.25e-12!9;UBERON:0010092!2.25e-12!9;UBERON:0004732!4.24e-12!13;UBERON:0002037!6.55e-12!6;UBERON:0006215!6.55e-12!6;UBERON:0000956!2.72e-11!25;UBERON:0000203!2.72e-11!25;UBERON:0001893!6.51e-11!34;UBERON:0002780!1.14e-10!41;UBERON:0001890!1.14e-10!41;UBERON:0006240!1.14e-10!41;UBERON:0003056!1.27e-10!61;UBERON:0001869!2.28e-10!32;UBERON:0003080!2.71e-10!42;UBERON:0002791!3.58e-10!33;UBERON:0002020!1.49e-09!34;UBERON:0003528!1.49e-09!34;UBERON:0002619!2.15e-08!22;UBERON:0001950!7.05e-08!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;4.05e-40;6!UBERON:0002680;1.29e-26;9!UBERON:0001895;1.29e-26;9!UBERON:0004733;7.53e-20;12!UBERON:0002028;7.53e-20;12!UBERON:0004732;2.75e-18;13!UBERON:0000013;1.12e-12;5!UBERON:0002410;1.12e-12;5!UBERON:0000010;2.98e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.22e-40,6;UBERON:0006215,2.22e-40,6;UBERON:0002680,8.68e-27,9;UBERON:0001895,8.68e-27,9;UBERON:0010092,8.68e-27,9;UBERON:0003076,2.73e-21,15;UBERON:0003057,2.73e-21,15;UBERON:0004733,5.61e-20,12;UBERON:0002028,5.61e-20,12;UBERON:0007277,5.61e-20,12;UBERON:0004732,2.10e-18,13;UBERON:0000013,1.15e-12,5;UBERON:0002410,1.15e-12,5;UBERON:0001016,1.27e-11,89;UBERON:0001017,6.97e-08,81;UBERON:0000010,3.01e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72369481307503,2.24400760368678,1.56727360739044,0.286235987131057,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,1.05950199351452,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34171076742555,2.78312513475119,1.85910308591229,1.86589899027667,1.51392510525377,3.6497735907583,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,1.04337364477569,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672786506072164,0.87192013766656,0.7333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,0.773288812777695,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,3.32861967686659,2.05886054286514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0.213425530045242,0,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0.169291777801603,0,0,0,0,0.307240764308458,0.223676107892416,0.834245708559542,0,0.835218521685727,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.562677665642051,0,0.329607748453519,0,0,0,0,0,0,0,0,0.179021174675609,0.511572370226872,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,4.5774520895125,3.87027409759286,1.47773809476774,0.87754158861589,0,0.139423744278603,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.606610196826093,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0.442306057399416,0.150323419414493,0.72581733978073,0,0,0.313932918407225,0,0.284609546029793,0,1.21491816834592,0,0.0870592065804026,0,0,0,0.0730893170861856,0,0,3.00070830751101,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0.313808538937,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544813624446302,2.41129722697529,2.88832816854191,3.73896304226267,0,0,0.425246896606173,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0.171086837884329,0,0,0,0,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0.314108192500469,0,0,0.250381861413,0,0.554645257684261,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,3.45985072082972,1.85656384926424,0.33946505990805,0.637724760305049,1.73510069962603,1.11728983594649,0,0,0,0,0,0.192687675289379,0,0.478901577171454,0,0,0.138314504928436,0.484426936895553,0,0.0981477185010256,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.0634158101939068,0,0,0,0.175871244359621,0,0,0.336283722218824,0,0,0,0,0,0.339848664884159,0.0657727735628491,0,0,0,0,0,0,0,0.47775168788705,0.0714765441766563,0,0.929931402945002,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0.233939463462106,1.19370465096821,0,0.45178432815584,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,1.2679671827502,0,0,0,0,0,0,0,0,0,0,1.57771562193185,0.203974470572744,1.30905207102113,0,0,0,0,1.26166424835079,0,0.380095503034311,0,0.801652215796681,0,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72369481307503,2.24400760368678,1.56727360739044,0.286235987131057,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,1.05950199351452,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34171076742555,2.78312513475119,1.85910308591229,1.86589899027667,1.51392510525377,3.6497735907583,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,1.04337364477569,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672786506072164,0.87192013766656,0.7333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,0.773288812777695,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,3.32861967686659,2.05886054286514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0.213425530045242,0,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0.169291777801603,0,0,0,0,0.307240764308458,0.223676107892416,0.834245708559542,0,0.835218521685727,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.562677665642051,0,0.329607748453519,0,0,0,0,0,0,0,0,0.179021174675609,0.511572370226872,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,4.5774520895125,3.87027409759286,1.47773809476774,0.87754158861589,0,0.139423744278603,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.606610196826093,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0.442306057399416,0.150323419414493,0.72581733978073,0,0,0.313932918407225,0,0.284609546029793,0,1.21491816834592,0,0.0870592065804026,0,0,0,0.0730893170861856,0,0,3.00070830751101,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0.313808538937,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544813624446302,2.41129722697529,2.88832816854191,3.73896304226267,0,0,0.425246896606173,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0.171086837884329,0,0,0,0,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0.314108192500469,0,0,0.250381861413,0,0.554645257684261,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,3.45985072082972,1.85656384926424,0.33946505990805,0.637724760305049,1.73510069962603,1.11728983594649,0,0,0,0,0,0.192687675289379,0,0.478901577171454,0,0,0.138314504928436,0.484426936895553,0,0.0981477185010256,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.0634158101939068,0,0,0,0.175871244359621,0,0,0.336283722218824,0,0,0,0,0,0.339848664884159,0.0657727735628491,0,0,0,0,0,0,0,0.47775168788705,0.0714765441766563,0,0.929931402945002,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0.233939463462106,1.19370465096821,0,0.45178432815584,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,1.2679671827502,0,0,0,0,0,0,0,0,0,0,1.57771562193185,0.203974470572744,1.30905207102113,0,0,0,0,1.26166424835079,0,0.380095503034311,0,0.801652215796681,0,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p3@AK298232 | |||
}} | }} |
Latest revision as of 07:50, 16 September 2015
Short description: | p3@AK298232 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AK298232_5end |
Coexpression cluster: | C1024_Pericytes_cerebellum_neuroblastoma_HES3GFP_iPS_extraskeletal_teratocarcinoma |
Association with transcript: | 60bp_to_AK298232_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.15e-33 | 5 |
astrocyte of the cerebellum | 9.34e-21 | 3 |
central nervous system pericyte | 7.93e-15 | 2 |
neurectodermal cell | 1.10e-13 | 59 |
migratory neural crest cell | 3.41e-11 | 41 |
neuron | 4.94e-11 | 6 |
neuroblast | 4.94e-11 | 6 |
electrically signaling cell | 4.94e-11 | 6 |
ectodermal cell | 6.88e-11 | 72 |
oligodendrocyte | 3.34e-09 | 7 |
macroglial cell | 3.34e-09 | 7 |
astrocyte | 3.34e-09 | 7 |
oligodendrocyte precursor cell | 3.34e-09 | 7 |
neural cell | 1.32e-08 | 25 |
neuronal stem cell | 2.18e-08 | 8 |
pericyte cell | 7.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.22e-40 | 6 |
rhombic lip | 2.22e-40 | 6 |
regional part of metencephalon | 8.68e-27 | 9 |
metencephalon | 8.68e-27 | 9 |
future metencephalon | 8.68e-27 | 9 |
posterior neural tube | 2.73e-21 | 15 |
chordal neural plate | 2.73e-21 | 15 |
segmental subdivision of hindbrain | 5.61e-20 | 12 |
hindbrain | 5.61e-20 | 12 |
presumptive hindbrain | 5.61e-20 | 12 |
segmental subdivision of nervous system | 2.10e-18 | 13 |
sympathetic nervous system | 1.15e-12 | 5 |
autonomic nervous system | 1.15e-12 | 5 |
nervous system | 1.27e-11 | 89 |
central nervous system | 6.97e-08 | 81 |
peripheral nervous system | 3.01e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 6.15e-11 | 10 |
neuroendocrine tumor | 1.22e-10 | 6 |
chondrosarcoma | 2.52e-08 | 1 |
extraosseous chondrosarcoma | 2.52e-08 | 1 |
myxoid chondrosarcoma | 2.52e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 2.52e-08 | 1 |
germ cell and embryonal cancer | 2.16e-07 | 22 |
germ cell cancer | 2.16e-07 | 22 |