FFCP PHASE1:Hg19::chr4:156129991..156130013,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4887 | |EntrezGene=4887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7957 | |HGNC=7957 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_uc003ior.2_5end | |association_with_transcript=-4bp_to_uc003ior.2_5end | ||
|cluster_id=chr4:156129991..156130013,+ | |||
|description=CAGE_peak_2_at_NPY2R_5end | |description=CAGE_peak_2_at_NPY2R_5end | ||
|id=chr4:156129991..156130013,+ | |id=chr4:156129991..156130013,+ | ||
|ontology_enrichment_celltype=CL:0000047!6.26e-12!8;CL:0002605!2.62e-09!3;CL:0002564!3.33e-09!3;CL:0000540!2.63e-07!6;CL:0000031!2.63e-07!6;CL:0000404!2.63e-07!6 | |ontology_enrichment_celltype=CL:0000047!6.26e-12!8;CL:0002605!2.62e-09!3;CL:0002564!3.33e-09!3;CL:0000540!2.63e-07!6;CL:0000031!2.63e-07!6;CL:0000404!2.63e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002605;8.23e-27;3!CL:0002564;1.22e-26;3!CL:0000047;6.71e-19;2!CL:0002319;3.54e-15;25!CL:0000128;7.69e-12;7!CL:0000126;7.69e-12;7!CL:0000127;7.69e-12;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,7.88e-27,3;CL:0002564,1.74e-26,3;CL:0000047,7.47e-18,8;CL:0002319,3.43e-15,25;CL:0000128,7.56e-12,7;CL:0000126,7.56e-12,7;CL:0000127,7.56e-12,7;CL:0002453,7.56e-12,7;CL:0000133,3.34e-08,59 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.55e-10;1!CL:0000133;6.61e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.14e-40!82;UBERON:0005743!4.12e-40!86;UBERON:0002020!9.08e-39!34;UBERON:0003528!9.08e-39!34;UBERON:0001893!1.01e-38!34;UBERON:0001869!5.22e-38!32;UBERON:0000073!1.73e-37!94;UBERON:0001016!1.73e-37!94;UBERON:0002791!9.45e-37!33;UBERON:0001049!2.90e-36!57;UBERON:0005068!2.90e-36!57;UBERON:0006241!2.90e-36!57;UBERON:0007135!2.90e-36!57;UBERON:0002780!4.78e-34!41;UBERON:0001890!4.78e-34!41;UBERON:0006240!4.78e-34!41;UBERON:0003080!4.45e-33!42;UBERON:0002616!3.58e-32!59;UBERON:0000956!3.60e-30!25;UBERON:0000203!3.60e-30!25;UBERON:0007023!6.66e-30!115;UBERON:0000955!8.62e-30!69;UBERON:0006238!8.62e-30!69;UBERON:0003075!1.84e-29!86;UBERON:0007284!1.84e-29!86;UBERON:0002346!1.04e-27!90;UBERON:0003056!3.59e-26!61;UBERON:0002619!1.78e-23!22;UBERON:0001950!1.38e-22!20;UBERON:0004121!2.64e-20!169;UBERON:0000924!1.46e-19!173;UBERON:0006601!1.46e-19!173;UBERON:0000033!3.61e-16!123;UBERON:0000153!4.28e-16!129;UBERON:0007811!4.28e-16!129;UBERON:0000025!5.64e-11!194;UBERON:0002308!5.78e-10!9;UBERON:0000125!5.78e-10!9;UBERON:0000200!6.85e-10!6;UBERON:0000922!2.84e-09!612;UBERON:0002242!3.33e-09!3;UBERON:0003068!3.33e-09!3;UBERON:0002328!3.33e-09!3;UBERON:0004880!3.33e-09!3;UBERON:0000064!1.73e-08!219;UBERON:0000481!3.69e-08!347;UBERON:0001872!3.71e-08!5;UBERON:0002021!3.85e-08!5;UBERON:0000988!6.04e-08!3;UBERON:0000468!6.52e-08!659;UBERON:0002771!9.60e-08!3;UBERON:0001871!2.19e-07!7;UBERON:0002420!3.20e-07!9;UBERON:0007245!3.20e-07!9;UBERON:0010009!3.20e-07!9;UBERON:0010011!3.20e-07!9;UBERON:0000454!3.20e-07!9;UBERON:0002050!3.21e-07!605;UBERON:0005423!3.21e-07!605;UBERON:0004111!5.61e-07!241 | |ontology_enrichment_uberon=UBERON:0001017!2.14e-40!82;UBERON:0005743!4.12e-40!86;UBERON:0002020!9.08e-39!34;UBERON:0003528!9.08e-39!34;UBERON:0001893!1.01e-38!34;UBERON:0001869!5.22e-38!32;UBERON:0000073!1.73e-37!94;UBERON:0001016!1.73e-37!94;UBERON:0002791!9.45e-37!33;UBERON:0001049!2.90e-36!57;UBERON:0005068!2.90e-36!57;UBERON:0006241!2.90e-36!57;UBERON:0007135!2.90e-36!57;UBERON:0002780!4.78e-34!41;UBERON:0001890!4.78e-34!41;UBERON:0006240!4.78e-34!41;UBERON:0003080!4.45e-33!42;UBERON:0002616!3.58e-32!59;UBERON:0000956!3.60e-30!25;UBERON:0000203!3.60e-30!25;UBERON:0007023!6.66e-30!115;UBERON:0000955!8.62e-30!69;UBERON:0006238!8.62e-30!69;UBERON:0003075!1.84e-29!86;UBERON:0007284!1.84e-29!86;UBERON:0002346!1.04e-27!90;UBERON:0003056!3.59e-26!61;UBERON:0002619!1.78e-23!22;UBERON:0001950!1.38e-22!20;UBERON:0004121!2.64e-20!169;UBERON:0000924!1.46e-19!173;UBERON:0006601!1.46e-19!173;UBERON:0000033!3.61e-16!123;UBERON:0000153!4.28e-16!129;UBERON:0007811!4.28e-16!129;UBERON:0000025!5.64e-11!194;UBERON:0002308!5.78e-10!9;UBERON:0000125!5.78e-10!9;UBERON:0000200!6.85e-10!6;UBERON:0000922!2.84e-09!612;UBERON:0002242!3.33e-09!3;UBERON:0003068!3.33e-09!3;UBERON:0002328!3.33e-09!3;UBERON:0004880!3.33e-09!3;UBERON:0000064!1.73e-08!219;UBERON:0000481!3.69e-08!347;UBERON:0001872!3.71e-08!5;UBERON:0002021!3.85e-08!5;UBERON:0000988!6.04e-08!3;UBERON:0000468!6.52e-08!659;UBERON:0002771!9.60e-08!3;UBERON:0001871!2.19e-07!7;UBERON:0002420!3.20e-07!9;UBERON:0007245!3.20e-07!9;UBERON:0010009!3.20e-07!9;UBERON:0010011!3.20e-07!9;UBERON:0000454!3.20e-07!9;UBERON:0002050!3.21e-07!605;UBERON:0005423!3.21e-07!605;UBERON:0004111!5.61e-07!241 | ||
|ontology_enrichment_uberon_v019=UBERON:0011135;3.01e-28;5!UBERON:0002216;3.01e-28;5!UBERON:0011134;3.01e-28;5!UBERON:0002209;3.01e-28;5!UBERON:0002213;3.01e-28;5!UBERON:0007844;3.01e-28;5!UBERON:0011138;3.01e-28;5!UBERON:0001130;3.01e-28;5!UBERON:0001066;3.01e-28;5!UBERON:0001468;3.01e-28;5!UBERON:0002242;1.22e-26;3!UBERON:0004905;9.07e-18;8!UBERON:0000982;9.07e-18;8!UBERON:0004770;9.07e-18;8!UBERON:0003528;7.99e-14;34!UBERON:0002020;7.99e-14;34!UBERON:0001869;4.60e-12;32!UBERON:0002791;2.28e-11;32!UBERON:0002780;1.54e-10;41!UBERON:0001890;1.54e-10;41!UBERON:0001893;4.50e-10;34!UBERON:0000125;4.51e-09;9!UBERON:0002308;4.51e-09;9!UBERON:0000075;5.56e-09;16!UBERON:0000956;3.02e-08;25!UBERON:0000203;3.02e-08;25!UBERON:0000073;9.01e-07;53!UBERON:0002616;9.01e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,3.85e-28,5;UBERON:0002216,3.85e-28,5;UBERON:0011134,3.85e-28,5;UBERON:0002209,3.85e-28,5;UBERON:0002213,3.85e-28,5;UBERON:0005856,3.85e-28,5;UBERON:0005866,3.85e-28,5;UBERON:0005863,3.85e-28,5;UBERON:0007844,3.85e-28,5;UBERON:0011138,3.85e-28,5;UBERON:0001130,3.85e-28,5;UBERON:0001066,3.85e-28,5;UBERON:0001468,3.85e-28,5;UBERON:0002242,1.74e-26,3;UBERON:0003068,1.74e-26,3;UBERON:0002328,1.74e-26,3;UBERON:0004880,1.74e-26,3;UBERON:0001016,1.30e-18,89;UBERON:0001017,5.22e-18,81;UBERON:0004905,1.06e-17,8;UBERON:0000982,1.06e-17,8;UBERON:0004770,1.06e-17,8;UBERON:0003528,1.11e-14,34;UBERON:0002020,1.11e-14,34;UBERON:0011216,1.15e-13,223;UBERON:0001049,1.54e-13,56;UBERON:0005068,1.54e-13,56;UBERON:0006241,1.54e-13,56;UBERON:0007135,1.54e-13,56;UBERON:0002780,4.27e-12,41;UBERON:0001890,4.27e-12,41;UBERON:0003080,4.27e-12,41;UBERON:0006240,4.27e-12,41;UBERON:0002791,4.81e-12,32;UBERON:0001869,4.81e-12,32;UBERON:0000073,1.34e-11,53;UBERON:0002616,1.34e-11,53;UBERON:0001893,2.58e-11,34;UBERON:0000125,4.91e-09,9;UBERON:0002308,4.91e-09,9;UBERON:0000075,5.98e-09,16;UBERON:0003075,8.02e-09,82;UBERON:0007284,8.02e-09,82;UBERON:0000955,1.17e-08,68;UBERON:0006238,1.17e-08,68;UBERON:0004121,1.26e-08,171;UBERON:0000924,1.26e-08,171;UBERON:0006601,1.26e-08,171;UBERON:0002346,2.40e-08,86;UBERON:0000956,3.21e-08,25;UBERON:0000203,3.21e-08,25;UBERON:0003056,7.22e-08,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.866364470720326,4.63956326019082,0,0,0,0,0,0,0,3.72106783270374,1.64249310087461,2.00868223351684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.933633106199299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59008173289419,2.60279707715243,0.773288812777695,1.34013012267479,2.55175500661265,0,0,0,5.03035116048474,1.00034104211935,1.62759014219841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28381696410176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844016498463076,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,1.5677537021303,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.404406797884062,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.677942222341597,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,1.22583065500418,0.160753148465019,0,0,0,0,0.242998226632099,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,1.55139547633861,0.13223260174269,0,0,0,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47759516587257,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.319267718114302,0.41023272848151,0.756215088665154,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,2.34323429584154,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.263091094251396,0,0,0,0.628462359664008,0,2.73947616152849,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0.437119121007915,0,0,0,1.96308467114945,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0.135982980381829,0.436350690340377,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.454672189309436,0,1.65833887891756,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0.143444410785353,5.65522606128223,0,0,0,0,2.34640942403454,0,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.866364470720326,4.63956326019082,0,0,0,0,0,0,0,3.72106783270374,1.64249310087461,2.00868223351684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.933633106199299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59008173289419,2.60279707715243,0.773288812777695,1.34013012267479,2.55175500661265,0,0,0,5.03035116048474,1.00034104211935,1.62759014219841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28381696410176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844016498463076,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,1.5677537021303,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.404406797884062,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.677942222341597,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,1.22583065500418,0.160753148465019,0,0,0,0,0.242998226632099,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,1.55139547633861,0.13223260174269,0,0,0,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47759516587257,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.319267718114302,0.41023272848151,0.756215088665154,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,2.34323429584154,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.263091094251396,0,0,0,0.628462359664008,0,2.73947616152849,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0.437119121007915,0,0,0,1.96308467114945,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0.135982980381829,0.436350690340377,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.454672189309436,0,1.65833887891756,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0.143444410785353,5.65522606128223,0,0,0,0,2.34640942403454,0,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p2@NPY2R | |short_description=p2@NPY2R | ||
}} | }} |
Latest revision as of 07:48, 16 September 2015
Short description: | p2@NPY2R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NPY2R_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_uc003ior.2_5end |
EntrezGene: | NPY2R |
HGNC: | 7957 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 7.88e-27 | 3 |
nucleus pulposus cell of intervertebral disc | 1.74e-26 | 3 |
neuronal stem cell | 7.47e-18 | 8 |
neural cell | 3.43e-15 | 25 |
oligodendrocyte | 7.56e-12 | 7 |
macroglial cell | 7.56e-12 | 7 |
astrocyte | 7.56e-12 | 7 |
oligodendrocyte precursor cell | 7.56e-12 | 7 |
neurectodermal cell | 3.34e-08 | 59 |