FFCP PHASE1:Hg19::chr13:100633115..100633134,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=B4DP89 | |UniProt=B4DP89 | ||
|association_with_transcript=-285bp_to_AK298232_5end | |association_with_transcript=-285bp_to_AK298232_5end | ||
|cluster_id=chr13:100633115..100633134,+ | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_2_at_AK298232_5end | |description=CAGE_peak_2_at_AK298232_5end | ||
|id=chr13:100633115..100633134,+ | |id=chr13:100633115..100633134,+ | ||
|ontology_enrichment_celltype=CL:0002319!1.15e-11!25;CL:0000047!4.59e-09!8;CL:0000133!1.74e-07!59;CL:0000540!4.10e-07!6;CL:0000031!4.10e-07!6;CL:0000404!4.10e-07!6 | |ontology_enrichment_celltype=CL:0002319!1.15e-11!25;CL:0000047!4.59e-09!8;CL:0000133!1.74e-07!59;CL:0000540!4.10e-07!6;CL:0000031!4.10e-07!6;CL:0000404!4.10e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002319;4.65e-13;25!CL:0000540;8.17e-11;6!CL:0000404;8.17e-11;6!CL:0002322;3.19e-08;5!CL:0000708;3.28e-08;3!CL:0002603;3.28e-08;3!CL:0002321;8.04e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.52e-15,8;CL:0002319,2.33e-13,25;CL:0000133,5.41e-12,59;CL:0000540,7.44e-11,6;CL:0000031,7.44e-11,6;CL:0000404,7.44e-11,6;CL:0000221,5.22e-09,72;CL:0002603,1.38e-08,3;CL:0002322,1.78e-08,5;CL:0000708,2.98e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000031;8.17e-11;6!UBERON:0006215;8.23e-10;3 | |||
|ontology_enrichment_disease=DOID:162!7.22e-17!235;DOID:14566!6.45e-16!239;DOID:0050687!5.63e-13!143;DOID:299!2.53e-07!25;DOID:305!3.95e-07!106;DOID:0050686!4.19e-07!137;DOID:1115!9.02e-07!20 | |ontology_enrichment_disease=DOID:162!7.22e-17!235;DOID:14566!6.45e-16!239;DOID:0050687!5.63e-13!143;DOID:299!2.53e-07!25;DOID:305!3.95e-07!106;DOID:0050686!4.19e-07!137;DOID:1115!9.02e-07!20 | ||
|ontology_enrichment_disease_v019=DOID:171;7.00e-13;10!DOID:3095;1.95e-08;22!DOID:2994;1.95e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,7.62e-13,10;DOID:3095,2.29e-08,22;DOID:2994,2.29e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0001017!4.45e-40!82;UBERON:0000073!2.91e-39!94;UBERON:0001016!2.91e-39!94;UBERON:0005743!1.04e-38!86;UBERON:0000955!4.09e-28!69;UBERON:0006238!4.09e-28!69;UBERON:0002346!1.27e-26!90;UBERON:0001049!2.93e-26!57;UBERON:0005068!2.93e-26!57;UBERON:0006241!2.93e-26!57;UBERON:0007135!2.93e-26!57;UBERON:0002616!4.16e-26!59;UBERON:0000924!1.10e-23!173;UBERON:0006601!1.10e-23!173;UBERON:0003075!2.92e-23!86;UBERON:0007284!2.92e-23!86;UBERON:0004121!5.49e-21!169;UBERON:0000033!4.13e-18!123;UBERON:0000153!6.28e-17!129;UBERON:0007811!6.28e-17!129;UBERON:0003076!4.63e-16!15;UBERON:0003057!4.63e-16!15;UBERON:0001893!6.33e-15!34;UBERON:0002020!2.16e-14!34;UBERON:0003528!2.16e-14!34;UBERON:0002791!3.41e-14!33;UBERON:0004732!3.51e-14!13;UBERON:0002780!3.89e-14!41;UBERON:0001890!3.89e-14!41;UBERON:0006240!3.89e-14!41;UBERON:0003080!1.40e-13!42;UBERON:0001869!1.82e-13!32;UBERON:0004733!2.90e-13!12;UBERON:0002028!2.90e-13!12;UBERON:0007277!2.90e-13!12;UBERON:0003056!3.48e-13!61;UBERON:0000956!1.58e-10!25;UBERON:0000203!1.58e-10!25;UBERON:0002680!3.92e-10!9;UBERON:0001895!3.92e-10!9;UBERON:0010092!3.92e-10!9;UBERON:0002619!4.79e-10!22;UBERON:0001950!7.85e-10!20;UBERON:0002037!3.08e-08!6;UBERON:0006215!3.08e-08!6;UBERON:0007023!5.83e-07!115 | |ontology_enrichment_uberon=UBERON:0001017!4.45e-40!82;UBERON:0000073!2.91e-39!94;UBERON:0001016!2.91e-39!94;UBERON:0005743!1.04e-38!86;UBERON:0000955!4.09e-28!69;UBERON:0006238!4.09e-28!69;UBERON:0002346!1.27e-26!90;UBERON:0001049!2.93e-26!57;UBERON:0005068!2.93e-26!57;UBERON:0006241!2.93e-26!57;UBERON:0007135!2.93e-26!57;UBERON:0002616!4.16e-26!59;UBERON:0000924!1.10e-23!173;UBERON:0006601!1.10e-23!173;UBERON:0003075!2.92e-23!86;UBERON:0007284!2.92e-23!86;UBERON:0004121!5.49e-21!169;UBERON:0000033!4.13e-18!123;UBERON:0000153!6.28e-17!129;UBERON:0007811!6.28e-17!129;UBERON:0003076!4.63e-16!15;UBERON:0003057!4.63e-16!15;UBERON:0001893!6.33e-15!34;UBERON:0002020!2.16e-14!34;UBERON:0003528!2.16e-14!34;UBERON:0002791!3.41e-14!33;UBERON:0004732!3.51e-14!13;UBERON:0002780!3.89e-14!41;UBERON:0001890!3.89e-14!41;UBERON:0006240!3.89e-14!41;UBERON:0003080!1.40e-13!42;UBERON:0001869!1.82e-13!32;UBERON:0004733!2.90e-13!12;UBERON:0002028!2.90e-13!12;UBERON:0007277!2.90e-13!12;UBERON:0003056!3.48e-13!61;UBERON:0000956!1.58e-10!25;UBERON:0000203!1.58e-10!25;UBERON:0002680!3.92e-10!9;UBERON:0001895!3.92e-10!9;UBERON:0010092!3.92e-10!9;UBERON:0002619!4.79e-10!22;UBERON:0001950!7.85e-10!20;UBERON:0002037!3.08e-08!6;UBERON:0006215!3.08e-08!6;UBERON:0007023!5.83e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0004732;3.89e-23;13!UBERON:0004733;4.27e-21;12!UBERON:0002028;4.27e-21;12!UBERON:0002037;2.76e-16;6!UBERON:0002680;2.83e-14;9!UBERON:0001895;2.83e-14;9!UBERON:0002346;4.21e-11;4!UBERON:0000923;4.21e-11;4!UBERON:0010316;4.21e-11;4!UBERON:0005291;4.21e-11;4!UBERON:0001016;1.50e-10;83!UBERON:0002050;7.15e-09;5!UBERON:0005423;7.15e-09;5!UBERON:0001896;8.78e-09;3!UBERON:0005290;8.78e-09;3!UBERON:0001017;1.70e-08;75!UBERON:0000073;1.89e-08;53!UBERON:0002616;1.89e-08;53!UBERON:0003210;3.28e-08;3!UBERON:0002298;1.88e-07;6!UBERON:0002360;6.53e-07;2!UBERON:0000094;6.53e-07;2!UBERON:0010743;6.53e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.97e-33,89;UBERON:0001017,2.98e-29,81;UBERON:0003076,3.41e-24,15;UBERON:0003057,3.41e-24,15;UBERON:0004732,1.94e-23,13;UBERON:0004733,2.24e-21,12;UBERON:0002028,2.24e-21,12;UBERON:0007277,2.24e-21,12;UBERON:0004121,4.35e-21,171;UBERON:0000924,4.35e-21,171;UBERON:0006601,4.35e-21,171;UBERON:0002346,3.08e-17,86;UBERON:0002037,1.14e-16,6;UBERON:0006215,1.14e-16,6;UBERON:0000955,6.91e-15,68;UBERON:0006238,6.91e-15,68;UBERON:0001049,8.31e-15,56;UBERON:0005068,8.31e-15,56;UBERON:0006241,8.31e-15,56;UBERON:0007135,8.31e-15,56;UBERON:0002680,1.60e-14,9;UBERON:0001895,1.60e-14,9;UBERON:0010092,1.60e-14,9;UBERON:0003075,8.98e-13,82;UBERON:0007284,8.98e-13,82;UBERON:0000073,1.40e-12,53;UBERON:0002616,1.40e-12,53;UBERON:0010371,8.77e-10,104;UBERON:0001896,8.40e-09,3;UBERON:0005290,8.40e-09,3;UBERON:0010096,8.40e-09,3;UBERON:0003210,2.98e-08,3;UBERON:0011216,4.39e-08,223;UBERON:0002298,1.99e-07,6;UBERON:0002360,6.67e-07,2;UBERON:0000094,6.67e-07,2;UBERON:0010743,6.67e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96993692922861,2.24400760368678,1.88072832886853,0,0.547497700291537,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41802225746102,0.221729397462564,0.790513071238134,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66493170409425,2.30470369792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,2.12047629314376,1.74290914304278,1.96956004529204,1.51392510525377,2.91981887260664,0,0,0,0,0,0.118306800039844,0,0,0,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0,0,0,0,0,0,0,1.27523445472584,0.70445216541493,0,0,0,0,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79409734952577,2.61576041299968,1.10007428731425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,1.14861935834114,0,0,0,0,0,0,0,0,1.27047312111232,2.60279707715243,1.54657762555539,0.335032530668698,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15381273209015,1.37257369524342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330037999682352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.116475108079,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0.144269212976445,0.426851060090485,0.637705090915289,0,0,1.05836791361941,0,0,0.456469358066384,0,0,0.677167111206413,0.321176150207399,0,0,0,4.30137070031841,2.23676107892416,2.0021897005429,0,0.278406173895242,0,0.811367035427949,0,0,0.18714054040822,0,0.242721043499027,0,0.568272293612826,0,0,0,0,1.26602474769461,0,0.988823245360557,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.834912883456661,0,0.260427761085233,0,0,0.1137934482855,0,0.472775363535873,0,0.583209226766509,0.347249989866585,0,0.361789315876224,71.7134160690291,88.2422494251173,29.2592142764012,3.51016635446356,0,0.139423744278603,0,0,0,0.179515288819544,0,0,0.0915975934018623,0,0,0,0,0,0.392125068635479,0,0.189753732724185,0,0.210998064528027,0,0.141353071433941,0,0,0,0,0,0.86494757262552,0.626531697032732,1.55022605855557,0,0.702793337176017,0.547364367646998,0,0,0,0,0,9.47798694427319,0.150323419414493,1.14057010536972,1.32930774541437,0.661983911750998,0.313932918407225,0,1.42304773014896,0.416024019039416,1.38847790668105,0,0.0870592065804026,0,0,0.19351266257817,0.146178634172371,0.0821154570532092,0,3.88326957442601,0,0.137041924646751,0.19871461170299,0.696418755514666,0,0.320635281006135,0.213452994739353,0.19980960958213,0.288180834308212,0.229073192331831,0.686379991447858,0,0,0,1.49494626680975,1.77824838730966,0.101998217636322,0.577901179803038,0.600420288709789,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0.590564889088493,0,0,2.45166131000836,2.89355667237035,2.75078873194468,2.07720169014593,0,0,0.607495566580247,0.670869375198532,0,0,0.633602019116439,0,0,0,0,0,0,0,0,0,0,0.681552087141687,0.113312091520126,0,0,0.258565912723101,0.39669780522807,0,1.40963004463334,0,0,0,0,0.592834895693833,0.121792598380896,0,0,0,0,0,2.51286554000375,0,0.488105059607853,1.3771002377715,2.29363678276028,7.09945929835855,1.4903136705932,0,0.249960815924213,0,0.856396000634902,0,0,2.8984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0.71635536432595,0,0.219284049578707,0.353378291891762,0,0,0.512483037175893,0.345430341731199,0,2.35039341457942,0,0,0,0,0.491545817507439,0.211312123358627,0,0,0.172214979660816,0,1.10463570151104,0,0,0,0,8.6496268020743,4.25917588948854,1.86705782949428,10.4161710849825,8.42763196961215,6.70373901567893,0,2.52357584004011,0,0,0,0.513833800771676,0,1.43670473151436,0.82046545696302,0.756215088665154,0.899044282034833,0.968853873791107,1.42769420259154,0.490738592505128,0.235939446695481,0.183428598521679,0.115525666150338,0,1.3807198521202,1.19349733269765,0,0.80682027481408,0,0,0,0.443568258651136,0.87798860003913,0.781078098613847,1.44680757550829,0.697573912132975,1.64092442705466,0,0,1.05522746615772,0.127762427639595,0.535701835878287,0,0,0,0,0,0,2.24300118823545,1.05236437700559,0,0,0,0.314231179832004,0,0.913158720509496,0,0,1.28657779517981,0.632054446930906,1.97610423125813,0.347716544605159,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0.559277158988962,0,0.487671699929078,0,0,0,0,6.78424444040106,1.79055697645231,0,0.33883824611688,0.109940516745429,0,0,0.437119121007915,0,0,0,2.1593931382644,0.594092800654172,2.9585900930838,0,0,0,0,0,0,0,0.730336388246517,0,0.573358332605805,1.57771562193185,0.815897882290976,0.436350690340377,0,0,0,0,1.26166424835079,0.109265571963696,2.4072715192173,0,0.801652215796681,0.0918948995348449,0.250707539292375,0.1515573964364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| ||
|short_description=p2@AK298232 | |short_description=p2@AK298232 | ||
}} | }} |
Latest revision as of 07:46, 16 September 2015
Short description: | p2@AK298232 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AK298232_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -285bp_to_AK298232_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.52e-15 | 8 |
neural cell | 2.33e-13 | 25 |
neurectodermal cell | 5.41e-12 | 59 |
neuron | 7.44e-11 | 6 |
neuroblast | 7.44e-11 | 6 |
electrically signaling cell | 7.44e-11 | 6 |
ectodermal cell | 5.22e-09 | 72 |
astrocyte of the cerebellum | 1.38e-08 | 3 |
embryonic stem cell | 1.78e-08 | 5 |
leptomeningeal cell | 2.98e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 7.62e-13 | 10 |
germ cell and embryonal cancer | 2.29e-08 | 22 |
germ cell cancer | 2.29e-08 | 22 |