FFCP PHASE1:Hg19::chr10:111756104..111756149,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=120 | |EntrezGene=120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=245 | |HGNC=245 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000468251,uc001kyt.3_5end | |association_with_transcript=0bp_to_ENST00000468251,uc001kyt.3_5end | ||
|cluster_id=chr10:111756104..111756149,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_11_at_ADD3_5end | |description=CAGE_peak_11_at_ADD3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002494!1.83e-08!16 | |ontology_enrichment_celltype=CL:0002494!1.83e-08!16 | ||
|ontology_enrichment_celltype_v019=CL:0000746;1.17e-10;3!CL:0002494;6.88e-09;16!CL:0000737;4.34e-08;4!CL:0002549;1.16e-07;2 | |ontology_enrichment_celltype_v019=CL:0000746;1.17e-10;3!CL:0002494;6.88e-09;16!CL:0000737;4.34e-08;4!CL:0002549;1.16e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000746,1.43e-10,3;CL:0000513,1.43e-10,3;CL:0002494,5.82e-09,16;CL:0000737,5.02e-08,4;CL:0002549,9.82e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000513;1.17e-10;3 | |ontology_enrichment_development_v019=CL:0000513;1.17e-10;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;9.63e-08;14 | |ontology_enrichment_disease_v019=DOID:2394;9.63e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,1.03e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000059!1.14e-08!11;UBERON:0000160!7.81e-07!27 | |ontology_enrichment_uberon=UBERON:0000059!1.14e-08!11;UBERON:0000160!7.81e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;3.63e-19;22!UBERON:0000160;1.05e-17;17!UBERON:0004907;3.66e-11;5!UBERON:0004921;7.37e-11;33!UBERON:0000059;9.64e-11;11!UBERON:0001052;1.39e-08;4!UBERON:0005629;1.16e-07;2!UBERON:0005358;1.16e-07;2!UBERON:0001886;1.16e-07;2!UBERON:0004086;1.16e-07;2!UBERON:0005282;1.16e-07;2!UBERON:0005281;1.16e-07;2!UBERON:0002108;3.37e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0005409;3.63e-19;22!UBERON:0000160;1.05e-17;17!UBERON:0004907;3.66e-11;5!UBERON:0004921;7.37e-11;33!UBERON:0000059;9.64e-11;11!UBERON:0001052;1.39e-08;4!UBERON:0005629;1.16e-07;2!UBERON:0005358;1.16e-07;2!UBERON:0001886;1.16e-07;2!UBERON:0004086;1.16e-07;2!UBERON:0005282;1.16e-07;2!UBERON:0005281;1.16e-07;2!UBERON:0002108;3.37e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.09e-17,17;UBERON:0005409,1.39e-16,25;UBERON:0004907,3.87e-11,5;UBERON:0000059,1.00e-10,11;UBERON:0001052,1.43e-08,4;UBERON:0005629,9.82e-08,2;UBERON:0005358,9.82e-08,2;UBERON:0001886,9.82e-08,2;UBERON:0004086,9.82e-08,2;UBERON:0005282,9.82e-08,2;UBERON:0005281,9.82e-08,2;UBERON:0000948,2.57e-07,24;UBERON:0005498,2.57e-07,24;UBERON:0004140,2.57e-07,24;UBERON:0009881,2.57e-07,24;UBERON:0004141,2.57e-07,24;UBERON:0003084,2.57e-07,24;UBERON:0007005,2.57e-07,24;UBERON:0004139,2.57e-07,24;UBERON:0004291,2.57e-07,24;UBERON:0002108,3.37e-07,4 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.305653622991805,0.246301768349837,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0,0.574752439954483,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,11.4019146149618,1.15076305659177,0,0,0,0,0,0,0,0,2.22664428346111,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,8.87141511448566,0.860509862246441,1.06400514659507,1.68203280042692,0,0,4.04574346019696,0.404132016209064,1.79808093424805,2.8757911252537,5.76175924479999,0,0,0.570471821544449,0.149448680551801,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38207584636044,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0,0,0.323292113637624,0,0,0,0,0,0,0.121973706129595,0.132529768321485,3.60201222895507,1.14027160516907,2.27088765788066,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,21.2769998679586,0.343135620597051,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.176096868026452,0.621984346622316,1.72943944100354,0.25248486685276,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.7333828582095,0.258543431515556,0,0.845302752556,0.26593811658487,0,0,0,0,0.428933980974443,0,0,0.65147236858747,0.355391948742546,0,15.3734082300389,3.48613383440118,3.59902768255405,0,0,0,0.239624855491583,0,0,1.15825045334063,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0.604780586659361,0,0,0,0.896974044789907,0,0.321707842287215,0,0.154209693802656,0.177561725313127,0,0,0.232420756919918,10.7564910136544,0.200506470303285,0,0.803701137152247,0.546273504020151,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.309123034943167,0,0,0,0,1.6068392984416,0,0.154048617114644,0.15350367472613,0,0,0,0.255679882248303,0,0,0,0,0,0.464845549297286,0.62962469366128,0,0,0,0,0.55597265731176,0.572499546967965,0.372158369359667,2.21465597303108,0.762520775695299,0,0,1.27281299170375,0,0,0.274537029736055,0.235624804691373,0.404364963146632,0,0.421258456238981,0,1.70599442741899,0,0.136499911407986,0.848432591722276,0,0,1.32687795048244,0,0,0,0.405820753925408,0.30982349809975,0.281695602532241,0,0.294747123039363,0.35667105148125,0,0,0,0,0,0,0.670302275535787,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.111443384277478,0,2.86493381685228,0,3.68592842519078,0,0.140669416410513,0,0,0,0,1.38141957765574,0,0,0.123084805461069,0.311039587661807,0,0,0,0.295930216910801,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0.221158519862449,0,1.75508317723178,0,0,0.0769502585037971,0,0,0,0,0.957003479195758,0.183195186803725,0,0,0,0.166211681900156,0.451191321234361,1.17637520590644,1.00692952185506,0.569261198172555,0.476809736941136,0,0,14.9834255719977,0.865554558968364,0.995261931078505,8.1380959343072,10.9985426088053,0,0,0,0.269604531922708,0.802577647298789,0,0,0,0,0,22.9882360492461,1.53036380815245,0.695052375913368,0.150323419414493,0.622129148383483,0,0,0,0,0,0,0.520679215005393,0,0,0.17472666824203,0,0,0.0730893170861856,0,0.193978032976839,0,0.451961481561065,0,0,0.316553979779393,0,0,7.89776080535604,0,1.29681375438695,0,0,0,0,0,0.271808412147228,0,0,0,0,0,0,3.86788897277961,0,0,0,0,0.399358000997982,0.429226048136571,0,0.403100834920358,0.720599767084807,9.31967596219631,0,0,0,3.24810688998671,0.0846733320657845,0,0,0,0,0,0,0.77380195455795,0.0607495566580247,0,0.236417121897595,1.99327434912993,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.213574825135389,0,0,0,0,0.121792598380896,0,0,0.2506898940227,0,0,0.628216385000937,0,0,0.250381861413,0.573409195690071,0.110929051536852,0.248385611765534,0.138348634936231,0,0.151649117541648,0,0.235265819698172,0,0,0,0,1.66441758450784,0,0,0.889811221596536,0.228840068396924,1.66354016139563,0.932623203496683,0.443565449968902,0.796483835818512,0,0.931577741257556,3.7323558705677,0.797525143673985,0,2.40412174395549,8.75851987988229,1.62748293281865,0,1.07410557042488,3.24823631914946,0.398095888698616,0,0,0.336749488765919,0,0.192619830407303,0.214441591374926,0,0,0.231522474323834,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0.318004350653419,0,0,0,0,0,0,0.159633859057151,0,0,0,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0,0.0887023701626388,0.115233987555779,0,0,0.197318320688547,0,0,0.078493092850514,0.157115589916002,10.0897978792964,5.47895232305697,0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| |phase1_expression=0.363356758541113,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.305653622991805,0.246301768349837,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0,0.574752439954483,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,11.4019146149618,1.15076305659177,0,0,0,0,0,0,0,0,2.22664428346111,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,8.87141511448566,0.860509862246441,1.06400514659507,1.68203280042692,0,0,4.04574346019696,0.404132016209064,1.79808093424805,2.8757911252537,5.76175924479999,0,0,0.570471821544449,0.149448680551801,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38207584636044,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0,0,0.323292113637624,0,0,0,0,0,0,0.121973706129595,0.132529768321485,3.60201222895507,1.14027160516907,2.27088765788066,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,21.2769998679586,0.343135620597051,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.176096868026452,0.621984346622316,1.72943944100354,0.25248486685276,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.7333828582095,0.258543431515556,0,0.845302752556,0.26593811658487,0,0,0,0,0.428933980974443,0,0,0.65147236858747,0.355391948742546,0,15.3734082300389,3.48613383440118,3.59902768255405,0,0,0,0.239624855491583,0,0,1.15825045334063,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0.604780586659361,0,0,0,0.896974044789907,0,0.321707842287215,0,0.154209693802656,0.177561725313127,0,0,0.232420756919918,10.7564910136544,0.200506470303285,0,0.803701137152247,0.546273504020151,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.309123034943167,0,0,0,0,1.6068392984416,0,0.154048617114644,0.15350367472613,0,0,0,0.255679882248303,0,0,0,0,0,0.464845549297286,0.62962469366128,0,0,0,0,0.55597265731176,0.572499546967965,0.372158369359667,2.21465597303108,0.762520775695299,0,0,1.27281299170375,0,0,0.274537029736055,0.235624804691373,0.404364963146632,0,0.421258456238981,0,1.70599442741899,0,0.136499911407986,0.848432591722276,0,0,1.32687795048244,0,0,0,0.405820753925408,0.30982349809975,0.281695602532241,0,0.294747123039363,0.35667105148125,0,0,0,0,0,0,0.670302275535787,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.111443384277478,0,2.86493381685228,0,3.68592842519078,0,0.140669416410513,0,0,0,0,1.38141957765574,0,0,0.123084805461069,0.311039587661807,0,0,0,0.295930216910801,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0.221158519862449,0,1.75508317723178,0,0,0.0769502585037971,0,0,0,0,0.957003479195758,0.183195186803725,0,0,0,0.166211681900156,0.451191321234361,1.17637520590644,1.00692952185506,0.569261198172555,0.476809736941136,0,0,14.9834255719977,0.865554558968364,0.995261931078505,8.1380959343072,10.9985426088053,0,0,0,0.269604531922708,0.802577647298789,0,0,0,0,0,22.9882360492461,1.53036380815245,0.695052375913368,0.150323419414493,0.622129148383483,0,0,0,0,0,0,0.520679215005393,0,0,0.17472666824203,0,0,0.0730893170861856,0,0.193978032976839,0,0.451961481561065,0,0,0.316553979779393,0,0,7.89776080535604,0,1.29681375438695,0,0,0,0,0,0.271808412147228,0,0,0,0,0,0,3.86788897277961,0,0,0,0,0.399358000997982,0.429226048136571,0,0.403100834920358,0.720599767084807,9.31967596219631,0,0,0,3.24810688998671,0.0846733320657845,0,0,0,0,0,0,0.77380195455795,0.0607495566580247,0,0.236417121897595,1.99327434912993,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.213574825135389,0,0,0,0,0.121792598380896,0,0,0.2506898940227,0,0,0.628216385000937,0,0,0.250381861413,0.573409195690071,0.110929051536852,0.248385611765534,0.138348634936231,0,0.151649117541648,0,0.235265819698172,0,0,0,0,1.66441758450784,0,0,0.889811221596536,0.228840068396924,1.66354016139563,0.932623203496683,0.443565449968902,0.796483835818512,0,0.931577741257556,3.7323558705677,0.797525143673985,0,2.40412174395549,8.75851987988229,1.62748293281865,0,1.07410557042488,3.24823631914946,0.398095888698616,0,0,0.336749488765919,0,0.192619830407303,0.214441591374926,0,0,0.231522474323834,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0.318004350653419,0,0,0,0,0,0,0.159633859057151,0,0,0,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0,0.0887023701626388,0.115233987555779,0,0,0.197318320688547,0,0,0.078493092850514,0.157115589916002,10.0897978792964,5.47895232305697,0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| ||
|short_description=p11@ADD3 | |short_description=p11@ADD3 | ||
}} | }} |
Latest revision as of 07:40, 16 September 2015
Short description: | p11@ADD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_ADD3_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000468251, uc001kyt.3_5end |
EntrezGene: | ADD3 |
HGNC: | 245 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 1.43e-10 | 3 |
cardiac muscle myoblast | 1.43e-10 | 3 |
cardiocyte | 5.82e-09 | 16 |
striated muscle cell | 5.02e-08 | 4 |
fibroblast of choroid plexus | 9.82e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.09e-17 | 17 |
gastrointestinal system | 1.39e-16 | 25 |
lower digestive tract | 3.87e-11 | 5 |
large intestine | 1.00e-10 | 11 |
rectum | 1.43e-08 | 4 |
vascular plexus | 9.82e-08 | 2 |
ventricle of nervous system | 9.82e-08 | 2 |
choroid plexus | 9.82e-08 | 2 |
brain ventricle | 9.82e-08 | 2 |
ventricular system of brain | 9.82e-08 | 2 |
ventricular system of central nervous system | 9.82e-08 | 2 |
heart | 2.57e-07 | 24 |
primitive heart tube | 2.57e-07 | 24 |
primary heart field | 2.57e-07 | 24 |
anterior lateral plate mesoderm | 2.57e-07 | 24 |
heart tube | 2.57e-07 | 24 |
heart primordium | 2.57e-07 | 24 |
cardiac mesoderm | 2.57e-07 | 24 |
cardiogenic plate | 2.57e-07 | 24 |
heart rudiment | 2.57e-07 | 24 |
small intestine | 3.37e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.03e-07 | 14 |