FFCP PHASE1:Hg19::chr13:100623375..100623425,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85416 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=20322 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-403bp_to_ENST00000397451_5end | |||
|cluster_id=chr13:100623375..100623425,- | |||
|coexpression_cluster_id=C1024 | |||
|description=CAGE_peak_1_at_ZIC5_5end | |||
|id=chr13:100623375..100623425,- | |||
|ontology_enrichment_celltype=CL:0002319!1.03e-11!25;CL:0000133!9.24e-09!59;CL:0000047!6.62e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0002319;3.26e-13;25!CL:0002322;2.63e-07;5!CL:0000540;3.34e-07;6!CL:0000404;3.34e-07;6!CL:0000095;9.83e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.55e-13,25;CL:0000133,2.21e-09,59;CL:0000047,4.39e-09,8;CL:0002322,2.59e-07,5;CL:0000540,3.63e-07,6;CL:0000031,3.63e-07,6;CL:0000404,3.63e-07,6;CL:0000095,9.70e-07,17;CL:0000123,9.70e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.68e-08;82!CL:0000031;3.34e-07;6 | |||
|ontology_enrichment_disease=DOID:0050687!9.80e-32!143;DOID:162!1.40e-28!235;DOID:14566!4.84e-27!239;DOID:305!5.56e-23!106;DOID:3095!2.18e-09!22;DOID:2994!2.18e-09!22;DOID:299!6.56e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.02e-08;22!DOID:2994;2.02e-08;22!DOID:171;1.66e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.94e-20,143;DOID:162,9.95e-19,235;DOID:14566,1.06e-17,239;DOID:305,2.67e-15,106;DOID:3095,2.30e-08,22;DOID:2994,2.30e-08,22;DOID:171,1.85e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001017!9.22e-39!82;UBERON:0005743!8.88e-38!86;UBERON:0000073!3.34e-37!94;UBERON:0001016!3.34e-37!94;UBERON:0000955!1.80e-29!69;UBERON:0006238!1.80e-29!69;UBERON:0002346!1.49e-27!90;UBERON:0001049!1.98e-25!57;UBERON:0005068!1.98e-25!57;UBERON:0006241!1.98e-25!57;UBERON:0007135!1.98e-25!57;UBERON:0002616!3.08e-25!59;UBERON:0003075!1.81e-24!86;UBERON:0007284!1.81e-24!86;UBERON:0000924!1.36e-22!173;UBERON:0006601!1.36e-22!173;UBERON:0004121!3.54e-20!169;UBERON:0000033!3.13e-18!123;UBERON:0001893!4.46e-18!34;UBERON:0002791!1.73e-17!33;UBERON:0002020!2.93e-17!34;UBERON:0003528!2.93e-17!34;UBERON:0002780!5.17e-17!41;UBERON:0001890!5.17e-17!41;UBERON:0006240!5.17e-17!41;UBERON:0001869!7.12e-17!32;UBERON:0000956!9.55e-17!25;UBERON:0000203!9.55e-17!25;UBERON:0003056!1.75e-16!61;UBERON:0003080!2.64e-16!42;UBERON:0000153!3.12e-16!129;UBERON:0007811!3.12e-16!129;UBERON:0002619!2.15e-14!22;UBERON:0001950!5.40e-13!20;UBERON:0003076!1.05e-10!15;UBERON:0003057!1.05e-10!15;UBERON:0004732!1.40e-09!13;UBERON:0004733!2.73e-09!12;UBERON:0002028!2.73e-09!12;UBERON:0007277!2.73e-09!12;UBERON:0002680!1.74e-07!9;UBERON:0001895!1.74e-07!9;UBERON:0010092!1.74e-07!9;UBERON:0002037!6.99e-07!6;UBERON:0006215!6.99e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;7.13e-20;25!UBERON:0000203;7.13e-20;25!UBERON:0001893;6.69e-18;34!UBERON:0001869;2.18e-17;32!UBERON:0000073;3.54e-17;53!UBERON:0002616;3.54e-17;53!UBERON:0002619;4.44e-17;22!UBERON:0002791;5.60e-17;32!UBERON:0003528;4.73e-16;34!UBERON:0002020;4.73e-16;34!UBERON:0001950;2.19e-15;20!UBERON:0002780;5.08e-15;41!UBERON:0001890;5.08e-15;41!UBERON:0000955;2.13e-14;68!UBERON:0001016;7.01e-14;83!UBERON:0001017;3.44e-13;75!UBERON:0004732;9.42e-10;13!UBERON:0004733;2.18e-09;12!UBERON:0002028;2.18e-09;12!UBERON:0002037;7.22e-08;6!UBERON:0002680;3.06e-07;9!UBERON:0001895;3.06e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.08e-42,81;UBERON:0001016,6.40e-42,89;UBERON:0000955,2.17e-32,68;UBERON:0006238,2.17e-32,68;UBERON:0002346,2.09e-28,86;UBERON:0001049,3.36e-28,56;UBERON:0005068,3.36e-28,56;UBERON:0006241,3.36e-28,56;UBERON:0007135,3.36e-28,56;UBERON:0000073,1.68e-27,53;UBERON:0002616,1.68e-27,53;UBERON:0003075,6.92e-25,82;UBERON:0007284,6.92e-25,82;UBERON:0004121,1.53e-23,171;UBERON:0000924,1.53e-23,171;UBERON:0006601,1.53e-23,171;UBERON:0001893,2.34e-20,34;UBERON:0003056,6.42e-20,61;UBERON:0000956,1.09e-19,25;UBERON:0000203,1.09e-19,25;UBERON:0002780,1.77e-19,41;UBERON:0001890,1.77e-19,41;UBERON:0003080,1.77e-19,41;UBERON:0006240,1.77e-19,41;UBERON:0001869,6.17e-19,32;UBERON:0002791,8.54e-19,32;UBERON:0003528,2.34e-18,34;UBERON:0002020,2.34e-18,34;UBERON:0010371,2.03e-17,104;UBERON:0002619,6.79e-17,22;UBERON:0011216,8.33e-17,223;UBERON:0001950,3.11e-15,20;UBERON:0010314,8.10e-12,132;UBERON:0003076,6.03e-10,15;UBERON:0003057,6.03e-10,15;UBERON:0004732,7.63e-10,13;UBERON:0004733,1.78e-09,12;UBERON:0002028,1.78e-09,12;UBERON:0007277,1.78e-09,12;UBERON:0002037,7.12e-08,6;UBERON:0006215,7.12e-08,6;UBERON:0002680,2.46e-07,9;UBERON:0001895,2.46e-07,9;UBERON:0010092,2.46e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,10.465289936527,9.58803248847989,19.4341927316414,7.72837165253853,8.34933992944594,6.65375989852455,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8715039738678,10.8647404756656,5.27008714158756,1.5062593682237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0.560677600142307,0,0,0,0,0,5.90293967815232,2.88087962239999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.6638209404549,42.0119365579108,34.974376803725,19.7992615079358,32.8017106138317,54.3816265022987,0,0,0,0,0,4.02243120135469,3.54027849164014,5.3022426574366,3.52940712743661,3.05031221729369,4.74541238222193,1.8876383142423,1.17732879075208,0.769494313892781,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,2.91665277507493,0,0,0,0,0,0,4.3299402607582,12.2886229273581,1.29149563659404,0,0,0,3.1608175918371,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.73704481982989,7.41132117016576,4.8403268641827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29723871668228,0,0,0,0,0,0,0.215627574859517,0,19.3111914409072,5.20559415430487,4.63973287666617,2.34522771468088,5.10351001322531,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0,8.81105208582333,8.92172901908225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,5.86044574837398,3.71292749642646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.58237554039501,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.29369418809016,15.3996776842137,0,0,0,0,1.59426272728822,0,0,0,0,0,0,0,0,1.01575066680962,0,0,0,0,3.6868891717015,4.2498460499559,5.8397199599168,0,2.50565556505718,0,2.43410110628385,0,0,1.30998378285754,0,3.6408156524854,0,5.68272293612826,0,0.296964680832639,0,4.97073823883149,8.15882615180974,0,4.94411622680279,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,3.87733098438087,3.33965153382665,3.99227596002388,1.5625665665114,0,0,2.73104275885199,0.254253650292766,13.0013224972365,0.344743373241465,0.874813840149763,2.77799991893268,0,1.08536794762867,7.62908681585416,22.3370105061074,13.5951904718632,4.60709334023342,1.85195387982283,0.975966209950223,0,0.113942055847001,1.1528195219403,3.94933635402997,0.54323685961004,0,0,0,0,0,0,2.25595660617181,2.74487548044835,1.1747511088309,2.46679852541441,0,1.89898258075224,0.652931232636591,0.282706142867882,0,0,0,0,0.593042257361244,1.11207545051853,1.46190729307638,6.13350310124161,0,1.1713222286267,0.91227394607833,1.76098157038881,3.3989253134773,0,0,6.1214552326098,3.79119477770928,2.85614496887536,6.73973244082106,1.32930774541437,1.65495977937749,1.88359751044335,4.77889719091835,10.2459436570725,0.554698692052555,8.50442717842141,0,1.04471047896483,0,0,5.32159822089968,3.28901926887835,4.92692742319255,0,15.7978466777785,1.80784592624426,1.09633539717401,1.39100228192093,4.43175571691151,0.782205530939212,3.04603516955828,0,2.39771531498556,4.32271251462318,2.06165873098648,2.05913997434357,1.00838358591705,4.34883874479014,2.12124631155116,2.98989253361951,3.451893928307,1.52997326454483,1.15580235960608,0,2.60120219894787,0,0,0,0,0,0,0.399358000997982,0,0,0,0,2.32991899054908,0.393915911536118,0.0824158583811665,0.337017719270924,4.62609163119319,0,3.18091875923721,14.5737644539386,55.2990830719666,51.7148281605599,44.867556507152,0,0,4.13096985274568,1.67717343799633,0.0788057072991982,0.0524545881349981,1.47840471127169,1.79287339332845,1.34340638123612,0,0,0,0,0,0,0,0,1.36310417428337,0.113312091520126,0,0,0.387848869084652,1.45455861916959,2.56630256826494,0,0,0,0,0,2.37133958277533,0.243585196761792,0.638341257770182,0,0,0,0,8.95208348626335,2.65820453990096,2.19647276823534,8.01221956521599,4.58727356552057,5.76831067991632,2.35966331177257,0.138348634936231,1.37478448758317,0.151649117541648,1.7127920012698,0.941063278792687,0,8.11557760220621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,1.07220795687463,7.56883446699114,0,0.694567422971502,0.244736704506468,1.79088841081487,1.85280868296583,2.63140859494449,0.706756583783524,1.73622634443823,0,2.56241518587947,3.79973375904318,4.25403938648335,8.84853991371077,0,0,0,2.6208787907713,0,1.26787274015176,0,0,0,0.567515953566836,0,0,1.86623178009892,0,0,44.034463719651,46.6325155079899,20.537636124437,19.3443177292531,15.6159062966343,16.7593475391973,0,5.44146040508648,0,0,0,3.08300280463006,1.41696576325585,10.2165669796577,3.48697819209284,3.52900374710405,3.1120763608898,4.52131807769183,1.42769420259154,1.37406805901436,6.01645589073476,0.550285795565037,3.58129565066048,0,4.1421595563606,7.75773266253471,0,0.20170506870352,0,0,0.3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| |||
|short_description=p1@ZIC5 | |||
}} |
Latest revision as of 07:39, 16 September 2015
Short description: | p1@ZIC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZIC5_5end |
Coexpression cluster: | C1024_Pericytes_cerebellum_neuroblastoma_HES3GFP_iPS_extraskeletal_teratocarcinoma |
Association with transcript: | -403bp_to_ENST00000397451_5end |
EntrezGene: | ZIC5 |
HGNC: | 20322 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.55e-13 | 25 |
neurectodermal cell | 2.21e-09 | 59 |
neuronal stem cell | 4.39e-09 | 8 |
embryonic stem cell | 2.59e-07 | 5 |
neuron | 3.63e-07 | 6 |
neuroblast | 3.63e-07 | 6 |
electrically signaling cell | 3.63e-07 | 6 |
neuron associated cell | 9.70e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 9.70e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.94e-20 | 143 |
cancer | 9.95e-19 | 235 |
disease of cellular proliferation | 1.06e-17 | 239 |
carcinoma | 2.67e-15 | 106 |
germ cell and embryonal cancer | 2.30e-08 | 22 |
germ cell cancer | 2.30e-08 | 22 |
neuroectodermal tumor | 1.85e-07 | 10 |