FFCP PHASE1:Hg19::chr4:155531315..155531320,-: Difference between revisions
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|id=chr4:155531315..155531320,-
|short_description=p12@FGG
|description=CAGE_peak_12_at_FGG_5end
|association_with_transcript=28bp_to_uc003ioi.2_5end
|EntrezGene=2...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2266 | |EntrezGene=2266 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3694 | |HGNC=3694 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_uc003ioi.2_5end | |||
|cluster_id=chr4:155531315..155531320,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_12_at_FGG_5end | |||
|id=chr4:155531315..155531320,- | |||
|ontology_enrichment_celltype=CL:0000181!9.00e-46!12;CL:0000417!9.00e-46!12;CL:0000668!9.00e-46!12;CL:0000414!9.00e-46!12;CL:0000412!9.00e-46!12;CL:0000182!9.00e-46!12;CL:0000223!1.85e-13!59;CL:0002563!8.14e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.11e-37;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.11e-37,12;CL:0000223,1.42e-08,58 | |||
|ontology_enrichment_development_v019=CL:0000223;1.97e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.36e-41!19;UBERON:0006925!1.36e-41!19;UBERON:0008836!1.36e-41!19;UBERON:0008835!5.85e-36!22;UBERON:0003894!5.85e-36!22;UBERON:0009854!2.09e-34!23;UBERON:0007499!1.13e-31!25;UBERON:0009497!1.13e-31!25;UBERON:0000015!1.13e-31!25;UBERON:0002423!1.13e-31!25;UBERON:0006235!1.13e-31!25;UBERON:0004161!1.13e-31!25;UBERON:0005057!1.83e-30!26;UBERON:0009856!1.83e-30!26;UBERON:0002365!1.40e-25!31;UBERON:0002330!1.40e-25!31;UBERON:0002368!1.12e-22!35;UBERON:0003929!6.87e-20!54;UBERON:0000949!1.15e-17!45;UBERON:0005172!1.82e-14!55;UBERON:0005173!1.82e-14!55;UBERON:0002530!1.73e-13!59;UBERON:0005911!4.47e-13!82;UBERON:0002417!4.78e-13!61;UBERON:0000916!4.78e-13!61;UBERON:0004921!3.49e-08!129;UBERON:0004185!3.49e-08!129;UBERON:0001041!4.16e-08!98;UBERON:0000490!1.07e-07!138;UBERON:0005177!2.04e-07!107;UBERON:0009569!5.12e-07!113;UBERON:0002405!7.83e-07!115;UBERON:0001242!8.14e-07!4;UBERON:0001262!8.14e-07!4;UBERON:0004786!8.14e-07!4;UBERON:0004808!8.14e-07!4;UBERON:0001277!8.14e-07!4;UBERON:0001007!8.91e-07!155;UBERON:0001555!8.91e-07!155;UBERON:0007026!8.91e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.83e-42;19!UBERON:0006925;3.83e-42;19!UBERON:0002423;2.66e-32;25!UBERON:0002365;4.24e-27;31!UBERON:0002330;4.24e-27;31!UBERON:0002368;9.64e-22;33!UBERON:0000949;3.54e-18;43!UBERON:0005172;2.69e-13;52!UBERON:0005173;2.69e-13;52!UBERON:0002530;6.38e-10;57!UBERON:0001007;1.03e-09;81!UBERON:0002417;4.32e-09;58!UBERON:0000916;4.32e-09;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.83e-42,19;UBERON:0006925,3.83e-42,19;UBERON:0008836,3.83e-42,19;UBERON:0008835,1.49e-36,22;UBERON:0003894,1.49e-36,22;UBERON:0009854,5.16e-35,23;UBERON:0007499,2.66e-32,25;UBERON:0009497,2.66e-32,25;UBERON:0000015,2.66e-32,25;UBERON:0002423,2.66e-32,25;UBERON:0006235,2.66e-32,25;UBERON:0004161,2.66e-32,25;UBERON:0009856,4.21e-31,26;UBERON:0002365,2.93e-26,31;UBERON:0002330,2.93e-26,31;UBERON:0002368,2.23e-23,35;UBERON:0000949,2.09e-18,45;UBERON:0003929,1.70e-15,54;UBERON:0005172,1.70e-15,54;UBERON:0005173,1.70e-15,54;UBERON:0002530,2.92e-14,59;UBERON:0002417,4.87e-14,60;UBERON:0000916,4.87e-14,60;UBERON:0005911,1.66e-10,82;UBERON:0001041,5.98e-10,87;UBERON:0005177,1.11e-08,101;UBERON:0009569,6.64e-08,112;UBERON:0003914,1.34e-07,117;UBERON:0004921,1.75e-07,118;UBERON:0005256,2.56e-07,122 | |||
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|short_description=p12@FGG | |||
}} | }} |
Latest revision as of 07:36, 16 September 2015
Short description: | p12@FGG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_FGG_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 28bp_to_uc003ioi.2_5end |
EntrezGene: | FGG |
HGNC: | 3694 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.11e-37 | 12 |
endodermal cell | 1.42e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 3.83e-42 | 19 |
digestive gland | 3.83e-42 | 19 |
liver bud | 3.83e-42 | 19 |
hepatic diverticulum | 1.49e-36 | 22 |
liver primordium | 1.49e-36 | 22 |
digestive tract diverticulum | 5.16e-35 | 23 |
epithelial sac | 2.66e-32 | 25 |
epithelium of foregut-midgut junction | 2.66e-32 | 25 |
anatomical boundary | 2.66e-32 | 25 |
hepatobiliary system | 2.66e-32 | 25 |
foregut-midgut junction | 2.66e-32 | 25 |
septum transversum | 2.66e-32 | 25 |
sac | 4.21e-31 | 26 |
exocrine gland | 2.93e-26 | 31 |
exocrine system | 2.93e-26 | 31 |
endocrine gland | 2.23e-23 | 35 |
endocrine system | 2.09e-18 | 45 |
gut epithelium | 1.70e-15 | 54 |
abdomen element | 1.70e-15 | 54 |
abdominal segment element | 1.70e-15 | 54 |
gland | 2.92e-14 | 59 |
abdominal segment of trunk | 4.87e-14 | 60 |
abdomen | 4.87e-14 | 60 |
endo-epithelium | 1.66e-10 | 82 |
foregut | 5.98e-10 | 87 |
trunk region element | 1.11e-08 | 101 |
subdivision of trunk | 6.64e-08 | 112 |
epithelial tube | 1.34e-07 | 117 |
subdivision of digestive tract | 1.75e-07 | 118 |
trunk mesenchyme | 2.56e-07 | 122 |